Ll_transcript_287811

• Id Trinity: TRINITY_DN51320_c6_g1_i1
• Name Transcript: Ll_transcript_287811
• Sequence: TAATCTCTTAGTGCATAGACACGCATCAAAGGATAAGAACACCGTTTTTGTGAGTCTTCATTCAAGATTGAAACACCAAAATGGTGCTTGACTCAGAATC TAACACAACAAATGTTGTTGCCCCTCTCCTACCACCAGAAGAAGATCGCTGTTCCCAACATGGGTCCATTTATGGAGCAGTGTTCAACATATCAACCACC ATGGTTGGTGCAGGAATCATGTCAATCCCAGCCACCATGAAAGTGCTAGGAATAATTCCAGGGTTGGTGGTGATTGTGTTGGTGGCACTAGTAACAGATA TCACAGTGGAGTTTATGTTAAGGTACACTGGTTCAGGAAAATCTATTACCTATGCTGGCATGGTGGGAGAATCATTTGGTCCCCTTGGATCCCTTGCTGT TAAGATTTGTGTTATCATCACTAATCTTGGTGTCCTTATCGTCTATCTCATCATTCTTGGAGATGTGCTATGTGGAAATGAGTCAAATGGAATAACACAC TTGGGTATTCTACAAGATTGGCTTGGCATCCATTGGTGGACCTCTCGTGCTTTTGCTCTTCTAACACTCGCACTCTTAATCATTCTTCCATTGGTTATGT TAAGGCGTGTTGATTCACTCAGGTTTACTTCTGCAATATCAATCCTACTAGCATTGGTCTTTGTTGTAATATGTTCATCCATGTCATTTTATGCATTATG GCGCGGCAAAACTCAGTCACCTAGGATGCTCCCTGATTTCTCTAAAGTAACTGTCTTAGACCTTTTTACCACTGTCCCAATCTTTGTCACGGGTTTCGGC TTCCATGTCAATGTTCATCCGATTAGAGCAGAGCTTAGAAAACCAGGAGATATGAAATGGGCGGTGCGGATTTCTTTGATAATCAGCGTGGTCATTTACT TCGCTATAGGCTTCTTCGGGTACCTATTGTTTGGGGACTCCATCATGGCTGATATGCTAGTAAACTTTGATCATAGTTCCAATACCCCTGCAGGTCGATA TCTCAACGACATTGTTCGGTTAAGCTATGCACTCCATCTAGCACTTGTGTTCCCCATTATGAGCTTTTCCTTGAGGGCCAACATAGATGAATTACTATTC TCAAACAAAAATAGGCCTCCCCTGGCATTAGACTCACCTAGATTTGTGTCTCTAACTCTATCTTTGCTTGCACTAACATACTTGGTGGCCGTGACCATCC CAAATGTTTGGTATTTCTATCAATTTTTGGGATCCACAACCATTGTTTGCCTCTCGTTCATCTTCCCTGCCTCAATCATTCTAAGGGATATGCATGGCAT CTCAGCCACAAAAGATCAGGTCATTGCAATAATGATGATTGTTTTGGCTGTGGGGACAAGTGTAATTGCTATATGGACCAACTTGTATTCAATTGCAGAC CAGTCATAACCATAATCTCATACATGTGATAATCTTTGGTCTGCTCTCCACATTTTTTCTTCTTGTCCCTATTGAGACATTGATAATTATACAATTGAAA ACTGAAATTACTTCACTGTTGTAGATAGAGGAATATATATATCAATAGTATGCTGTCAAGATTAAGCAACTAATGACTAACTTTTACATTCCAAATGAAA AGTAACCTTCTAAGTAGCTGAACTGAATTTAATGAAGTATCTAATAACAGTTTATGTCTACTTGGTATGAACTAGCTAGGCAAAGAAATCCAGAACTAAC AACAGTTTATGTCTACTTGTTTTAATCTCTCATGCAAGACTGTATTAGAAGTTAGGTGAATGATATGGCCAATTTGTTATCATATTGCAGTAATAACAGC ACCAATGCTAAGTTAGCTGAAATTTCAAAATTTGGTAACAGGTTTTGGAGTCATATCAGCTCACTCTCTAGACTACTTGGCTTTCACTTTCCTACAATAA AATTTAATCTATCTCATCTCATGACTTTTAGCACATATATCTAGAACTCATTAGGTGGGATAGCTGGACACTTTATCTAAAAAATAATAGCACTCTTTAT CTTATATTATTAGGTATTACAAGGGTATTACAAGTTTGATGAAGAAGTTATACATTGTGTAAAAGTTGATGAGTTAAAGAGTACACAAGTGGGTGGACTC ATATACCTAATGACTTAAGGTTTTGGGTCAAGATGTAGTGTCAAACCCATTTACATGCTTCTTTTGCTTAAGTCATGGAGGAATGTTATAGCTTATGGAT GAAGATCTCCCAACAAATGGTATCACAACCGATGGTTCAACAACCCAAAGGAGTATTGAAAGCGACAAGTGGTCGGTAGATTCGAGAGGTCAAGGTGTAT TCTGTGTGATAAAGACGTCTCACATCGTGCAAAAGTGACTCTCCAACACAACTAAACCATAACAATAAAAATAATAAAATAAGTCTCATGTGGAACTCGA ACATCTTGTTTGTGAAGAAAATATTCTCTGATAATACAACAAAATGTTATATGGTCACCCTCCACATTCACAGCAATGATAGATAATTGTTTAATCACTA ATCAGCTTTGTAAAATAATTCAACTGATATCTAATATGTAC
• Tissue: pods
• Gene name: LI_gene_184042;
• Additional information: details;

Expression of Ll_transcript_287811

FPKM

• PAB: 5.5
• PNAB: 5
• PS1: 5.5
• PS2: 2.4
• PS3: 4.8
• PW1: 3.1
• PW2: 5.6
• PW3: 3.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_287811

• Blastp: Amino acid transporter AVT6C from Arabidopsis with 51.38% of identity
• Blastx: Amino acid transporter AVT6C from Arabidopsis with 51.38% of identity
• Eggnog: amino acid transport(COG0814)
• Kegg: Link to kegg annotations (AT3G56200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454527.1)
• Pfam: Transmembrane amino acid transporter protein (PF01490.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;