Ll_transcript_288489

• Id Trinity: TRINITY_DN51322_c0_g1_i24
• Name Transcript: Ll_transcript_288489
• Sequence: CTTCATTTTTAGCATTCTGTACTAAAGAGTATTACGTAGGAACAGTGAATTAAATAAAGGATAAATGGGAATATTGCATTGAAGATCATCATTACCCATA TTTATTTTCTCCACTTTTCATCCTTATTGTTGTGACCATACCATGTTGCATAGGATCAACACCGCAAGGTCTTTTTGTGCTAAGGTTCTCAGAACCAAAC CTCACTCTGCTGCTGCTTTCTCAACTTCCTTGCTCTTCGATGAAACTCAGATACAGGTTCCTCTTAACATGCTAATGTTTTTATTTCCTAGATAGGATTT ATTTCATGTTCTTAGTAATATATAGCACAACACTACCTCACTGTTTGGGTGTTAAAGAATAAAAATTTGGATACCCCATCTGGGTTTTCTAGAAAAGTAC TATTGGGATAACATCTGCTGAAAATACTTGAGCTTATATGATCAAGAAAATAAGAAGATTGAACTATTTGAGTAGGAAAAAGATTGCTTTTGATACTGAA TGTTTAGGCTTTGTATATGGTATATGGCTGGTTATGAATGCTACTAGCATAAGATTGCACGGCATTCTGCCAATTAAAGAAACTAACTTGACATTTTTGG CAGCTTCAAACTCTACAAATTTCAAGTGGGTTGAAAATATTGAGACCCCCTTGAAAGCCTTATCTTTTATAGTGGGTTGAAAATTGCGAGATTTTGTATA CTAGCTTCTTCAAAGGTGAACTATGTCATGCTTTTAATGATTTCAAGGTTATAATACATTGAATGATACAGTTCAAAGAAAGTGTCTCTCAGTTTGCATC AGAAAACATTGCCCCTCATGCTTCAAAAATAGACCACACAAATTACTTTCCAAAGGAGATTAACCTATGGAAAAGCATGGGAGAATTTAATCTCCATGGG ATTACTGCACCAGAGGAATATGGAGGGCTTGGTCTAGGGTACTTGTATCACTGTATAGCAATGGAAGAGATTAGCCGTGCCTCGGGATCTGTTGGTCTTT CCTATGGTGCTCATTCTAACCTGTGTATCAATCAGCTGGTGAGGAATGGAAGCCCTGCTCAGAAAGAGAAATACTTGCCAAAGCTTATCTCCGGGGATCA TGTGGGAGCTTTGGCAATGAGTGAGCCAAATTCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGGGCTATGTACTGAATGGG AACAAGATGTGGTGTACTAATGGTCCAGTTGCTCAAACATTAGTATGTCTCTAAACTTCATAGCATTTTTCCATGCTCATTGTATTCACTGTGTTCATAT TTGGTCTGCCTTCAGAAAGTAGAAGGGAAATGTTTCCTCAAATGGTACTTTCATTGAACTATCTGTTCATCTAAAAATGTATCATTTTCATGTTCCATGG ACCTCATTGCTAAATAACAAAGAAAATGATCAAGATCATGTAAAACATTATTACACCATGAACAGGTGAAAAAGGTAAAAAAAACTGTTAAGCATGTTAT CATTCTGCTGCGTAAATATTTAATGTGAATCACATATTTCATTGCACACATTTAGCTTCTGATATCCAGAAGAGCTAAGAGGGGCCACTCTTTGCATTTG TTGGCGAATTTCTTTACCTATGGCTTATATGGGGAAGCTGAACGCCCATTTAGTATACACTAAATCAAAAAATCTAGACATGCTGTTAATTCATATTATA TATTTGATTGTGTTGAATTGAATCAGGTTGTCTATGCAAAAACAAACATAACAGCTGGGTCAAAAGGAATCACCGCATTCATCATAGAGAAGGGAATGCC TGGATTCAGTACTGCCCAGAAATTAGATAAACTCGGGATGCGAGGAAGTGATACATGTGAGCTTGTCTTTGAAAATTGCTTTGTTCCAGAAGAAAATGTT CTTGGGAAAGAAGGGAAAGGAGTCTATGTCATGATGTCCGGGTTGGATCTGGAGAGACTTGTTTTGGCAGCTGGTCCTCTTGGTATAATGCAGGCATGCC TTGATGTCTGCCTTCCTTATATTCGACAAAGAGAGCAGTTTGGTCGCCCTATCGGAGAGTTCCAGTTTATACAGGTTCATAATATGAAACAACATAACAT TCCCACCCTACGGTTAACCTGCAATTTGTTGTAAGAGAATCTTAGCCTTAACACTTTTATTACAGGGGAAAATTGCTGACATGTATACTTCTTTACAGTC CTCAAGGTAGAAGATTCTAATGTCATGGTACTCTTCTGTTTTTGAAAATAAGTTTGCATGGCACTAGATAACATCTTTCATTTCAGGGCTTATGTGTATT CTGTAGC
• Tissue: pods
• Gene name: LI_gene_184058;
• Additional information: details;

Expression of Ll_transcript_288489

FPKM

• PAB: 5.9
• PNAB: 0.7
• PS1: 1.7
• PS2: 0.9
• PS3: 1.1
• PW1: 1.7
• PW2: 2.8
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288489

• Blastp: 2-methylacyl-CoA dehydrogenase, mitochondrial from Solanum with 84.28% of identity
• Blastx: Isovaleryl-CoA dehydrogenase, mitochondrial from Solanum with 87.42% of identity
• Eggnog: Dehydrogenase(ENOG410XNMY)
• Kegg: Link to kegg annotations (102589539)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413614.1)
• Pfam: Acyl-CoA dehydrogenase, N-terminal domain (PF02771.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;