Id Trinity | TRINITY_DN51324_c1_g1_i2 |
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Name Transcript | Ll_transcript_287459 |
Sequence | ACACTTTCGATGTATATATATTAAATTCATTCAATTATTTAAGCAAATATAATAGTCCCATGGTGTATAGGGCCTAGACAACTAACCAAAAAAAGAAAGT ACATGAAAAAATCAATCGAAGGCCAATGGAAAAGTTGAAGATTTGAAGTTTCTTTAAATACTTCAACCCATTTCCAATTCTACCACCCCATCTCTCTTAT TCTCTCAACAAGATTAATTTCCTAGCTTCCTCAGTTATATTATATCTCAACACAACAATGACTGTGATGAAAATCACATGGAAAACTATATTCCCAAGTT GTTATAAGAGTGATGAAGATTGTCTATCACCACAGCCCAATAAAGTGGTGGCTTTACCTCAAAATACAACAAAGCATGGTGGTTCTTTAGGCAGGATCAC TGTGACTGATTTGAGTTTCCCAAGCACAACACTTTCAGAGGATCTATCCATTTCTCTAGCAGGGTCTAACTTGCATGTTTTTTCACTTGCTGAGCTTAAG ATTATAACACAGGGCTTCACTTCAAGTAACTTTTTAGGAGAAGGAGGGTTTGGACCAGTGCATAAGGGGTTCATTGATGATAAGCTTAGGCCTGGTCTCA TGGCTCAGCCTGTTGCTGTAAAGCTCTTAGATTTGGATGGATCACAGGGTCATAAAGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTAAGGAATCC ACACCTTGTGAAGCTGATTGGATATTGTTGTGAAGAGGAACACAGGCTTTTGGTATATGAATATTTACCAAGAGGGAGCTTAGAGAATCAACTTTTTAGA AGTAAGATACTTTGTCTTATAACATCCATTACTATCTTATTCTTTTACTTTGCTTAGAATTTTGACAGATTAATTAAGCCTTTCTTTTTCTAATGTCCTT TTGGGATCATTGCAGGATACTCAGCATCATTACCATGGTCAACAAGAATGAAGATAGCTGTTGGAGCTGCAAAGGGTCTAGCCTTCTTACATGAGGCACA GAAACCAGTCATCTATAGAGATTTTAAAGCTTCAAACATATTGTTAGACTCTGATTACAGTGCAAAACTCTCAGATTTTGGCTTAGCAAAAGATGGCCCT GAAGGAGATGACACCCATGTTTCAACTAGAGTCATGGGCACCCATGGCTATGCTGCCCCAGAATATGTCATGACAGCTTTGGAGTGGTCCTACTGGAGCT ACTAACAGGTAGAAGGTCAGTGGAGAAGGGGAGGCCACAAAGAGAGAAGAACCTAGTAGAATGGGCCAGGCCATATTTAAATGATTCAAGGAAACTTAGC AGAATAATGGATCCAAGGCTTGAGGGACAATATTCTGATATGGGGGCAAAAAAAGCAGCAGCATTGGCTTATCTATGTCTCAGTCACAGGGCAAAGAGTA GGCCTACAATGACCACAGTGGTCAAGACTCTGGAACCACTACAAGATTTTGATGACATTCCAATTGGTCCCTTTGTTTACACAGTTCCAAGTGATAAAGG TGAAGGGAATAAAGATACAAAAGAAAGTGGTACACTTAAGGAGAGGAAGAGAGAAAATGTTGGTCACAACCATCACAGGAGTCACCACCACAGCAATGGC CATAGGCATCATCCTCTCAAATCGCCCAAGACACCAAACTCAAAGTTACAGAATGATATACACCAAAATGGTAGAAGTGGATCAACCTCACCTACTGATA TTTCCTTTGCATCAGAAGGCCAAGGAATCAAACTTTAGTGCACACATGTTGTAATGTATATGCTGAAAGATTGCCCAGAGTCTAATTGGATAATCTGTCC CACATTTTCCATGTCCCATTGTGTCCCAACGAGACCCAATGGGAAGATGTCATCTATTTAAAATAAAAAATCATAAAATTATAAAATAATTTTTTGTTAT GGGGTGAGATTTGATTGGCTTGATACATGAGGACAAAGTATCTTCATTCCTCATATTCACTAGTACTAGGCTAAGTGTAATTGTCCTTGCATGGAAAACA CGCTTGAGTTTTTTTTTTTTGTTTTTTTATTCTTCAATTTCCGAAGGAAGTTAATTACTTTGAATTGTGAATACATTTTGCTCCATGATCAATCATAAGA CTATCTCTATGAGGGGGAAATGTTTAAAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_184073; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_287459
Blastp | Serine/threonine-protein kinase RIPK from Arabidopsis with 66.13% of identity |
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Blastx | Serine/threonine-protein kinase RIPK from Arabidopsis with 64.47% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT2G05940) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019455203.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |