| Id Trinity | TRINITY_DN51324_c1_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_287479 |
| Sequence | AAGTGATATTCAAAATCTTATTACTCTTTGGAAATGCATGTGGAGAAAGAAATGAGTTCTAGCAATCCTGCATATTAGTAATTTGGCTTCTTAATTTAAG CCACATGCTGTAATTTACCATGGCTTCACTACTACCTATGTCATACCCATCTCTCCCATTTTCTCAACAAAAATGGCTTCAAACTAAACCAAATTCCAAT ACAAACACATCCTTATTAATCCAATGCTGCCACAACCAAAGAAACCCTATCCAAGTAACAAGCAATGCCATGAGTTATCCAGAGAAGAATCCTATCATCA AAATCCCTCCAAGGCCAAGAAGAATAATCCTTGTTAGGCATGGAGAGAGTGAAGGAAACGTGGATGAGAGTCTATACACAAGGGTGGCTGATCCCAAGAT AGCCCTCACAGAAAAAGGGAAGGTTCAAGCTGAGGAATGTGGACACAGAATCAAGAATTTGATAGAGAAAGATGCTGATAAAAGTTGGCAACTTTACTTC TATGTGTCACCTTATAGAAGGGCCCTTGAAACTTTGAAGAGTCTTGCTCGTCCCTTTGAACGCTCAACAATTGCTGGCTTCAGAGAAGAGCCTCGAATTC GAGAACAAGATTTTGGGAACTTTCAAGATAAAGAAAAGATGCAAGTAGAAAAAGAAATGCGGATGCGTTACGGGCGATTCTTTTATCGATTTCCTAATGG AGAATCTGCAGCTGATGTATATGACAGGATCACTGGATTTAGAGAAACACTGAGGACAGATATTAGTCTTGGACGGTTTCAGCCACCAGGGGAAAATGAA ACAGACATGAACTTGGTGATTGTCTCACATGGTCTAACACTTAGAGTGTTTCTCATGAGGTGGTACAAGTGGACCGTTCAACAATTCGAGGGTCTCAATA ACATTGGAAATGGAAACATGCTTATCATGGAGAAGGGTTATGGTGGAAGGTATAGTTTATTGGGGCAACAAGATGAAGAAGAGCTAAGACGATTTGGATT GAGTAATGAAATGCTGGTTGAGCAGGAATGGCACAAATTTGCAAAGCCTCATGAACTGAATTATGATTGTCCTCTCGTCAATTCCTTCTTTCCACATCTC ACCGAGGAAACAAGCAGTGTCAACAAGGGTGATGCATGAGCATGCCACTCAGCTTTAATTATCAGTTAAGTTACTACAGTTAGAACTACACTTTTGTAAC AATAAATAATTGAGCCAAAAAGCTGGGACCAAGAAAAGGAGTTAATGGAAAGGGAATGAAGTTGTGGAAAAGCATATGATATTAGGAATAAAGTTGTATA AGGATATACTTTATTCTCATTCTCATAATATTATGTATATATACATACATATAGCATGTGGCTGATAGTTTTGTAAAATAATAGAAAATGGAGATGCGGG GTATCGATCCCCGTACCTCTCGCATGCTAAGCGAGCGCTCTACCATCTGAGCTACATCCCCATATTGTTTGTCACGTGTATCTTTCTATATTAGTCTGTA ATTAAATATAAAAGCGACAAAGAATTCAAATTCCCTTTCTCâBLAST |
| Tissue | pods |
| Gene name | LI_gene_184075; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_287479
| Blastp | Phosphoglycerate mutase-like protein AT74 from Arabidopsis with 53.38% of identity |
|---|---|
| Blastx | Phosphoglycerate mutase-like protein AT74 from Arabidopsis with 52.87% of identity |
| Eggnog | Phosphoglycerate mutase(ENOG4111HP2) |
| Kegg | Link to kegg annotations (AT3G05170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003517475.1) |
| Pfam | Histidine phosphatase superfamily (branch 1) (PF00300.21) |
| Rfam | tRNA (RF00005) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |