Id Trinity | TRINITY_DN51327_c0_g3_i6 |
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Name Transcript | Ll_transcript_289746 |
Sequence | TTCTCTTCCGCCACTGTCTCGCCGCTCGCTCATGCATCTGCCGCTCCCACTCAACCTCATTCTCTTCCTGCAACCACCCACCTTCCTAACCAAGGGTTGC CTTTCTTTCTTTGTGCTTATTCTTCATTTACTTTACTTTCAAACGGTTTGGGTGAACTCAGATGTCATGAAATTGGATTGCTTATAAAGCTGCCTCAAAA CTTGATTTCTAGTCATAGCTTCTATAATTGTTGTTAATGTGCTATGCTTTTGTTAACATTGCTTTCTTCTTATGATTCCGAATTTGGGATTCAATTTTAT GTTTGGTCATGGTTGTTAAGTCATGCCATTCTTCTCCCATCTTGCAGTATTCAACCCAAGGCAAAGAGAAGAGGTGGCCCAGGTGGTCTCAACAAACTCT GTGGTGTTTCGCCTGAACTTCAGGTCATTGTTGGCCACCCAGCATTGCCCAGGACCGAGGTTTCTACTCATTTTCTCTTTAGACTGGGTCACCTCTCCCG TTGTGAGGCCCAATTATTTTAACCTTTTAAAACAAGTCAAATTTATTGCCTATTTTGGTAGAGTTTCCGGTAAGATTTTTAATATGTGAAATGACCGTGG TTTAGATTGTGAAGCAACTGTGGGCTTACATAAGGAAAAACAATCTCCAAGATCCTAGCAACAAAAGGAAAATAATTTGCAATGATGAGCTGCGTGTGGT ATTCGAGACGGATTGCACTGACATGTTCAAGATGAATAAGTTGCTAGCTAAACACATAATCACCCTTGAACCAACCAAACAGCCAGTTCCTAAGAAGCAG AAGGTAGAGGCGGAGTCTGGAACAATAAGTGCTCAACCTGCTCCTTTGGTAATAATATCTGATGCACTTGCTAACTTTTTTGGCATTGCTGGAAGGGAGA TGCTACAGTCAGAGGTTCTAAGGCGTATCTGGGAGTACATAAAGGTTAAGCAACTAGAGGATCCTGTGAATCCTATGACAATAGTATGTGATGCAAAGCT TCAGGAGCTCTTTGGCTGTGAAAGCATTTCAGCATTAGGTATACCTGAAGTTTTGGGCCGTCATCATATTATTAGGAGATCATGAT BLAST |
Tissue | pods |
Gene name | LI_gene_184094; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289746
Blastp | Upstream activation factor subunit UAF30 from Saccharomyces with 35.96% of identity |
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Blastx | Upstream activation factor subunit spp27 from Schizosaccharomyces with 45.59% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (YOR295W) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426199.1) |
Pfam | SWIB/MDM2 domain (PF02201.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |