Ll_transcript_288230

• Id Trinity: TRINITY_DN51328_c1_g1_i8
• Name Transcript: Ll_transcript_288230
• Sequence: GGATGAGCTTCTCAGATCCAAGACTGCACAACAGCAAAGACTTGCTGCTGCTTCTCAACTCATGGCATCTTCTTTTCCATACTCACCAAAGTGCATGAAT TTTCTATTACAGCAGCAACAAAATGATTCTCCAAGAGGGGCAGTTGCAGCTCTTATGATGAATGAAGAGTTGCACAAGTTTGGAAGATCAAGGCTTGAAA GGAATGATTTTTCTTTGCATAGTCCTGGAATTGTTAACCCAGCTTCAAGGCAGATCTACTTGACCTTTCCAGCTGATAGCACTTTCAGAGAGGAAGATGT TTCAAATTACTTCAGCATTTATGGGCCTGTTCAAGATGTGAGGATTCCATATCAGCAAAAGCGCATGTTCGGATTTGTAACATTTGTTTATCCGGAGACA GTGAAGCTCATTTTGTCTAAAGGAAACCCTCATTTTGTTTGCGATGCTCGAGTGCTCGTTAAACCCTACAAGGAGAAGGGAAAAGTTGTGGACAAAAAGC AGCAACAACTAGATCGGGGTGATTTTTCACCCTGTGGTACTCCTATTGGATTGGATGCTAGAGACCCATTTGATCTCCAAATTGGTGGAGGGAGGATGTA CTATAACTCTCAAGACATGGCGTGGCGGAGGACTTCGGAGGAGCAATCCGATTTTCAGCAAGCCCTTGAGCTTCAAAGTAGAAGGCTCATGAGTCTGCAA CTTCTTGACATCAAGAAGCAACACGAGCGTGCGCTTTCCACCGGAAGTCCAATTCCTTCTCCCACACTCTCTCCTAACATGTTCAATCAAAATCTTGGTT TTTCTTCATTTCACAGCAACTCAGAGAGCCCAGAGGATAGTGGTTTAGGATCTGCTCCTGCTAGCACTGCATCAATTCCGGTTGATCTGCAGATGCAACA AACAGTTAACATTTCTGTTGGCAAAGAAGTGGCAGTTAGTGGAGAGAATGAAAAAAGTGATTTTCAAGAATGCTTGGAGCATAATCTTCCTGATAGCCCT TTTGCTTCACCCACAAAAGCCATTGGTGACAACATGGCTGCATTCTCCAATGGACCTAATGAGGTTGTTAATTCAGATGCTTCAGCTGCCAACTCTAAAT TTAATACTGCCACTATGCTTCCATCAGCATCTGGTCTAGACCTGGGATCTTTCAAATCTTTTAACTGCCAAATTCCCAGGTACCATTCTTAGCTTTGCTT TGCGATACCTATGAATTTAAGAGTCCGACTCCTCTCCGGTACCGGAGACTGGAGTATTGTATTTTCTTTCAGTTTTAAGGATAAAAATGTATTCCCTCTA TAAATAAGAGGATGTAAGTGTCATCGCATGTGGTTTTCTCTATTATTTCATAGTACTTTTCATCTGCAGTACTAGAGAGGATTCTGATTCTACATTTCAG TATCTATAATTTTGTGGACTCATTTACTTCGATTTCGGATTAGGTTTCCTTCTGGCCATGGAACAATTGGAATGATTGCCGGCACCGGTGATCCGATTGG CATTTAGTTTCCTAAGCTTTTGGGGAGACGAGCATATCCAAACAAACCTTGATATCAATACAAATCTGTAGAGAATCACCACCACCAATGCCATCACTAT CAATCAATTAATAATACTATACTACTTACTATCAATACAAAATGCATACTTAAAAGCAGTTTCAGTAAAAAGAAGTGGGACATGCACCTTTCCCTTTCTT TTGTTATCATTATTGCACCATTTTCACTTCTGTGTTGTCCCAAAAAGTATGTCACTTCGTGTGCTATTCTGTGATTGGTTGAAAATAATGCAGTTAAGTT AATAACTTAATAATAAAGTATTTTCCTGACCAATCGCAAGAGTGATACATTGAGTGACACTTTCTGGGACAGATGATGTGATTCGGCGGAGAATATAACC ACAGGGTACAGAAGTAACACACAATCAGAGTTAATGTGTAGTAGTAAAAACTGTCACTAATTTCTACCCTTCCCTTTATTTCTCATTTTGGTTGTATTAG TGTTATTCTGTTAGTTCTATGCTGTTAGAGGGACAATTTAAAGTCTCTGTACAAATTAAGCACAACCTAGAGAAAAAGAATGGTGCTGATGAAGCTGTAA AAGTAGTGCTGTAAAGGCTGATTCAAATCTTTGGTATAATTGTAAGTTCTTGATTTGGGTTGAAGTTCAAAAAGGGAAAGTTCTAATTATTCAGTCTTAT CTGTAATGTAATGATATTTGTACTCAAAATTAGTCATTATGCAAAGTTATCACATCAACTCCTAGATTTAGAAAGATAAAGCAAAAAAGCAAAAGTGACT TTAGTTTTGTATTAATTGATCTCTTTGTCGGGCTCCCCTTTCTTATATATTAGTGTTTTTTTTGTATAATTTAGAGTATTTTTTCACTTTTTGGGTAAGA AATTAATATTTTTGGAGTGTGTAATTGTCTAATAAGTGTTATGTTTAAGAATCGACTCTTTGATTTTTTAGTGTGATCATCATTTGTTTTCCTAAAAAAT GTTACAAAAATGCC
• Tissue: pods
• Gene name: LI_gene_184097;
• Additional information: details;

Expression of Ll_transcript_288230

FPKM

• PAB: 0.1
• PNAB: 1.3
• PS1: 0.7
• PS2: 0.6
• PS3: 0.2
• PW1: 0.1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288230

• Blastp: Zinc finger CCCH domain-containing protein 22 from Oryza sativa with 51.37% of identity
• Blastx: Zinc finger CCCH domain-containing protein 22 from Oryza sativa with 50.26% of identity
• Eggnog: zinc finger CCCH domain-containing protein(ENOG410YCDX)
• Kegg: Link to kegg annotations (4332722)
• CantataDB: Link to cantataDB annotations (CNT0000302)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450854.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;