| Id Trinity | TRINITY_DN51331_c0_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_288925 |
| Sequence | AAGAACTTCATGACACTGCCCAACATCAAGGTTCCTCTCATTCTTGGTGTCTGGGGAGGGAAAGGTCAAGGAAAATCTTTCCAATGTGAGCTTGTCTTCG CCAAGATGGGAATCAAGTGAGTTGTTGCTATGCTAGTTCCCCTAATGAACTATTTAGACATAAAAATATTCATGAGATTTTTTATAATAGCTAGTTGTTG ATAATTGACATACTATACTGCTAAACAACACATCAGTTAAACATATTAGAAACTAATTCCAAATTAAAAGTCTCTTTGGTGCATTTCAATTCAATACGTA ACATAATTTTGGTGCACCAAAAATACACGATGGAACAGGACAAAAATGATATTTTTTCTACTCGTTTCGGATCTACTCCACACCTTCTCGTCGAACCAAA ATGTTATACTTTCAAACTTTTGTCCCGCTCTTTTATGTTTACAGAAACACCAGTGTCAAACAAAGAAATAACAACCATATTCTCTGTTCCATCATGTTCT GAAGTTCCTACCAAACACTAGTGTTCACAGGCTTCTCCAAATTTGATATCTTCCTTGAATATATGTATCGCTACTAACTTTCTAGTGCCTATGTTGTTGT AATTACATAACAGCCCTATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCAGGAGAGCCAGCAAAATTGATAAGGCAAAGATACCGTGAAGCTGC AGATATAATAAGGAAGGGAAAGATGTGTGCCCTCTTCATCAATGATCTTGATGCAGGAGCTGGCCGTATGGGTGGAACCACACAGTACACTGTGAACAAC CAGATGGTGAATGCTACACTCATGAACATTGCTGATAATCCAACAAATGTGCAGCTTCCTGGTATGTACAACAAGGAAGAGAACCCGCGTGTGCCTATCA TTGTCACTGGTAACGATTTCTCAACATTGTACGCTCCTCTCATCCGTGATGGACGTATGGAGAAGTTCTACTGGGCACCTACTAGGGAAGATCGCATTGG TGTGTGCATAGGAATCTTCCGCAGTGACAATGTTCCTAAAGAGGATGTTGTCAAGATTGTTGACACCTTCCCTGGTCAATCCATTGATTTCTTTGGTGCA CTCAGGGCCAGAGTATATGACGACGAAGTGAGGAAGTGGATTGGTACTGTTGGTGTTGACGGCATTGGAAAGAAGCTTGTGAACTCAAAGGAAGGACCTC CAACCTTTGAGCAGCCCAAGATAACTGTGGAAAAGCTCTTAGAGTATGGTTTTATGCTTGTCCAAGAGCAAGAGAATGTGAAGAGAGTCCAACTTGCAGA CAAGTACTTGAATGAGGCTGCTCTTGGTGATGCTAACCAAGATTCTATCAAGAGAGGATCTTTCTATGGTTGGATCATTTATCTTTAGCAAAACAGTTTA ATTTCATTGAATGATAATACTTTTACTATATCAAAATTTAACTTAATTATACTTCGATCAAATAAGAAGGTAAGACTCGGCGCAACAATATGGTGGTTGC TTAGTAACATGTTTAAGGTGACAGCGTTGAGCTGTATTTTTTTATATTTGGATCAAATAAAACTTGTTCTAAATATTTTCCTTGTTTCATTAACTGTTGT GCAGGCAAGGCAGCACAGCAAATAAATGTTCCCGTTCCCGAAGGTTGTACTGATCCAAATGCGAAAAACTTTGACCCTACTGCTAGAAGTGATGACGGAT CCTGCTTATACACATTCTAAGCATATCAGGTGAAAGGAGAAGATGTTAAGATGAGAGATAACTGAATAAGTTTTATTATATTGTTCATCCTCTATAATTT TGAGTTATGTTGTGAACAATGTTTAATGGATTTGGTCCTTTGTCTTGTGTCTACCTTCCAGTCATGATATTTGTATCTCTTGTGTTTAATTCCTGGATAC TCCATTCTTAAACGTTTTGTAATCCTACTGTAAATTAGACATTGAGGTTTTTGGTCTATCAACATCTTATAATAAGGAGCCTTTTCCATCCTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_184115; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_288925
| Blastp | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic from Malus with 93.2% of identity |
|---|---|
| Blastx | Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic from Malus with 93.28% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (103456062) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461023.1) |
| Pfam | ATPase family associated with various cellular activities (AAA) (PF00004.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |