Ll_transcript_288916

• Id Trinity: TRINITY_DN51331_c0_g2_i4
• Name Transcript: Ll_transcript_288916
• Sequence: CTTTTTTGTCATTTAAGGGTGACTGGAATCTTGGTGGAATTATATGGTTGCCATGTGGCATCCAAGTAATCAACAATGTGTGGATGCTATGCACTCTACA ACCAATATATTTAAGGATATGATTTTCTGTGTTGATCCACAAATATAAGTCCTTCCTTCCTTGTGCTTATATTTCTGATCACTACAAAAGAAACTTTTCT CTGTGTTTGATTGCATTGTAGTACCTCTCTTTTCTACAGTTCCAAGTACAAAAACACAGCCATGGCTGCCACTGTTGGAAATGTCACTGTTACTAAACTG AACTTGAATGGCTCTGGAGCTGGAGCTTCAGTTCAAAGTTCAGCCTTCTTTGGAAGCAACCTGAAGAAGATTACCTCAAGGCTCCCAAACACCAAGGTTT CATGTGGAAGCTTCAAAGTTGTTGCTGCAGAAGAGATTGATCCGAAAAAGCAGACCGACACGGATAGATGGAAGGGTCTTGCGTATGATATTTCAGATGA TCAACAAGACATTACAAGGGGGAAGGGTATGGTTGATTCCCTTTTCCAAGCTCCCTCGGGTGCCGGTACTCACTATGCAGTCATGAACTCTTATGACTAC ATTAGTGGTGGCCTTAGACAATACCACTTGGACAATACCTTGGATGGTTTATACATTGCTCCTGCTTTTATGGACAAGCTTGTTGTTCACATCACCAAGA ACTTCATGACACTGCCCAACATCAAGGTTCCTCTCATTCTTGGTATATGGGGAGGCAAAGGTCAAGGAAAATCATTCCAATGTGAACTTGTCTTTTCCAA GATGGGAATCAAGTGCGTTATTGCTATACTAGCCCCTCCTAAAATAAATGTTTAGGCATAAAAATGTTCATGAGCCTTTACCTAATAGTATAAGCTTCTA GAAAAGTTAGTTGTTGATATGATACAACACAATGTCTATGAGCTTAACCAACATTATTCTTCTAAGTAAAAAATTCAATTTAAACATCGCAATGTAAGGT GGGAAAGTTGTTTCTTGATAATTGACAAACTATACTGCTACACAATAGTTCAGTTGAATATATTAGCAATTAATTCAAATTTAAAAGTTTCTTTGATGCA TTTCAATTCAATAAATTTTGGTGCAAGAACGGTACTCGATGGAACAGGTCCGAGATGATATTTTGTTCTGTTCTCTTTGGTTCCACACCACAACTTTTGG TAAACAAACTTCTCTGTTATGTTTACAGAATACACCAAACTGTCAAGCAAATAGCACAACTACACAACCATATTTTCTGTTCCATACTCTTTTGACATTC CTACCAAAATCGTAGTGTGCATTGGCTTCTACAAATTTGATGTCTTCCTTGAATATATGTATTGCTACTAATTTCTAGTCCTTGTGATGTTGCAATTACA TTAAAGCCCTATCATGATGAGTGCTGGAGAGTTGGAAAGTGGAAATGCTGGAGAGCCAGCGAAATTGATAAGGCAAAGGTACCGCGAAGCTGCAGATATA ATAAAGAAGGGGAAGATGTGTGCCCTCTTCATCAATGATCTCGATGCAGGAGCTGGTCGTATGGGTGGAACCACACAATACACTGTGAACAACCAGATGG TGAATGCTACACTCATGAATATTGCCGATAACCCAACAAATGTGCAGCTTCCTGGTATGTACAACCAGCAAGAGAACCCACGCGTGCCCATCATTGTCAC TGGTAACGATTTCTCAACTTTGTATGCTCCTCTCATTCGTGATGGGCGTATGGAAAAGTTCTACTGGGCACCTACAAGGGAAGACCGCATTGGTGTCTGC AAGGGAATTTTCCGCAGTGACAATGTTCCTGATGAGGATGTTGTCAAGATTGTCGACACCTTCCCTGGCCAATCCATTGATTTCTTTGGGGCACTCAGGG CCAGAGTATACGACGACGAAGTGAGGAAGTGGATTGGTAGTGTTGGTGTCGAGAGCATTGGAAAGAAGCTTGTGAACTCGAAGGAAGGACCTCCAACCTT TGAGCAGCCTGAGATGACTTTGGCTAAGCTCTTGGAATATGGTTACATGCTTGTCCAAGAGCAAGAGAATGTGAAGAGAGTCCAACTTTCGGACAAGTAC TTGAAAGAGGCTGCTCTTGGTGATGCTAACCAAGATGCTATCAAGAGAGGAGCTTTCTATGGCAAAGCAGCACAGCAAATAAATGTTCCGGTTCCTGAAG GTTGTACTGATCCAAATGCCACAAACTATGATCCAACTGCTAGAAGTGATGATGGATCCTGCTTATACACACTCTAAGCATTCTCAACATATTAGGTGAA AGGAGAAGTTGCTCAAACAAGAGATAGCTGAATAAGTTTGTTATATTGTTCATCCTCTATAACTTTGAGTTATATTGTGAACAATGTTAAATCTAGTTGG TGTCTTTGTCTCATGTCTACCTTTCATTCATGACATTTGTCTGTCTTGTGTTCAATCCTTGGGTTCTACCATTCTTGAGTTGTTTGTAATCCTATTGTAA ATTAGACATTGAGGTTTGTGGTAATGTGCTCTATCATCATCTTAGGATAGGAGGCTTTTCTCATCTTAAGCTTTAATTTATCCAAAAAATGTTGCATTCT CTAAGTGTGTGTCATAAACCATCAAAATGGGAGAAAAATTTCAGTTTCTTAGCAAAGCAATGAAGGAACAGATACAGACAGTTGCATGAATCACAGTATT TGATATTATTTGAAGAGTGTTTTTCTTTTTCTTCTACAGCAACCTTGGTGCAGCCTAACTACTCTTTGCATTGAACTCAGCCACAAATATTGAGACAATG CTCAAATATACCATATTGTTTGAAATTTATGGTGCATTGGAACAACATTTTTCTCCCTAGCCACATTTGACCAACAATAACTGTTGTGCAATATCATATC TCTA
• Tissue: pods
• Gene name: LI_gene_184115;
• Additional information: details;

Expression of Ll_transcript_288916

FPKM

• PAB: 4.2
• PNAB: 4.8
• PS1: 5
• PS2: 2.2
• PS3: 6.7
• PW1: 1.4
• PW2: 5.3
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288916

• Blastp: Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic from Larrea with 88.58% of identity
• Blastx: Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic from Larrea with 86.67% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0002861)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433087.1)
• Pfam: ATPase family associated with various cellular activities (AAA) (PF00004.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;