| Id Trinity | TRINITY_DN51334_c3_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_287937 |
| Sequence | CAGTCATTTACTCATTATTTAGACCCGAACATTCCCACATAACCCGTTTTATTACCCGCCAACTTGTTCAAAATTCCTTCCTCCATTATCGGGCACACAC ACACTCTCTCCCTATAACTCACATCATAATGCTCATACAAACACATCACCAAATCAACAATGGCGACGTTATCAGAGACCTACGCTTGTGTCCCCACCAC CGAACGTGGCCGCGGCATCCTCATCTCCGGCGACTCCAAATCCAACAACATTCTCTACTGCACCGCTCGATCAGTCATCATCCGCAATCTCGACAACCCT CTCCAGGTCTCCGTCTACGGCGAGCATGCCTATCCTGTGACGGTGGCTCGTTACTCGCCCAACGGCGAGTGGATCGCCTCCGCTGACGTGTCTGGTACCG TACGTATTTGGGGGACCCACAATGATTTCGTTTTGAAGAATGAGTTTCGGGTCCTATCGGGTCGGATCGATGATCTTCAATGGTCCCAAGATGGGTTGAG GATCGTTGCATGCGGTGATGGCAAGGGCAAATCATTTGTTCGCGCTTTTATGTGGGATTCAGGTTCCACAGTTGGTGATTTTGATGGCCATTCTCGACGG GTTTTAAGTTGTGCATTCAAACCAACAAGGCCTTTCCGCATTGTCACATGTGGAGAAGACTTTTTAGCCAATTTTTATGAAGGTCCACCATTCAAGTTCA ATATGTCCATCAGGGACCATTCGAATTTCGTCAATTGTGTTAGATTTTCTCCTGATGGGAGCAAATTTATTACTGTTAGCTCAGATAGAAAGGGTATTAT ATATGATGGAAAGACAGGGAACAAACTTGGAGAGTTGTCTGCAGAGGATGGTCACAAGGGCAGCATATATGCTGTTAGTTGGAGTCCTGACAGTAAACAG GTACTTACTGTGTCTGCTGACAAGTCTGCAAAGGTATGGGACATTCTTGAGGATGGTAGTGGCACAGTAAATAAGACCTTGGCTTGTACTGAAACAAGTG GGGTGGAAGACATGCTTGTTGGTTGTCTCTGGCTGAATGATCATCTTCTTACTATCTCTCTTGGTGGCACTATTTATTTGTATTCTGCTAAGGATTTAGA TAAAAGCCCGTTGTCATTATCTGGTCATATGAAAAATATCACTGTCTTGACTCTGCTCAACCGAAGTGAAAAGATGCTTTTGTCCAGCAGCTATGATGGA GTGATCATTAGATGGATTCCAGGCATTGGATACGGTGGTAAGTACGAGGAGACAAAACAATTTGGATTAATAAAACTGTTAGCAGCTGGCGAAGAAGAAA TTATCACTGCTGGATTTGACAACAAGGTATACAGAGTTCCGCTTCTGGGGGATAATTTTGGTCCTGCTGAGCATGTTGATGTTGGAAGTCAGCCTAAGGA TTTGAGCCTTGCACTTAATTCCCCTCAAATTGTTCTGATTGCAATTGAATCTGGGATTGTTTTACTTAATGGTTCAAAAATTGTCTCGACTAAACAACTG GGCTTTGTTGTGACTGCATCTGCTATTTCACCTGATGGCAGTGAAGCAATTGTAGGTGGGCAAGATGGTAAGTTGCATATATATTCTGTCTCAGGAGATA CTGTAACAGAAGAAAGTGTCCTTGAGAAGCACCGTGGTGCAATCAGTGTAATCAGATATTCTCCAGACGTTTCCATGTTTGCATCAGCTGATTTGAACCG TGAAGCTGTTGTGTGGGACCGTGCTTCCAAAGAGGTGAAGCTTAATAACATGTTGTTTCACACTGCACGTGTTAATTGCCTAGCGTGGTCACCTGATAGC AGCCTGGTAGCTACGGGTTCGCTTGATACATGTGTTATCATATATGAAATTGGGAAGCCAGCAGCAAGCCGCAGAACCGTTAAAGGAGCTCATTTAGGTG GAGTATACGGGTTAACTTTTATTGATCAGGAAAGAGTGGTTAGTTCAGGTGAAGATGGATGTGTTCGTGTATGGAGTTTAGTTTCAGAGTAAACTTAGCA TCAGAACCTCCCAATGCATCATGCAGTTATGGTAAGAAATTGATAGTTTTGCTGTCTTATATGATGACCATCAATTTTCTGCACTGGCTATGTAGTGGAA CTTTAGTGTCATCTCTTGATAGATTTCTCCTAGGACTGACAATTTGACACGTCTTATCCAAGCTGGAGTTACATCTGCACTCCCATTTATTGGCAAATAA ATTGTCAATAACTTTGTCTTTGTCTAAGCAAAGCCTCAATGCAAGTAATGAAATAGCACTTTTGTTCCCTTTATTTTGCCTATGAAGGCAATTTTAGTCC TTTAAGGCCTTTAAGTGCCCCCAGATATTTGATTAGAAAGACTGAGTACACTTCCTAAACACCTCATTGCTAATTAAAAAAAATAGAGGGACAAAAGTAA TTGTAGATATACTGAATAGAAAATGTTCATGTTGGTATTAGAATGAAGGTAATCATTTGTTTAATTTTTGAATGATTCTTGACATGTTTGTTAACCCATC CTGCCATCTAGCATAAATGGGAGCATATCCTTTGCAGAATCTTGACTCGTACTATGAAAGATATGCTATCATTTAAATAGTGGTCTATCAGTACAGAATC TTGGCTTTCTCCTGTGGCAATGCTTCAAATCCAGAATACAGGAAAAACAGTAGAGAACAGTGGATAATCTCAATCCCACAATATGCTGTCGCCTTACCTT TATTCTTTGACTATATTTTCTTCTTGAGCCAATCTAATGGCTTCAAAAGTGCCATCATTCTTGTAATTTACTAAGACAGTTCCAGAGAATATATTATTGA CAATTAAACTAAGAAGCCATTTCATGAACTATAAGTAGTTCTGTAAGGTTAGGCTAGCATTTTGTTATGTAGAGGTAAATTTCATTTAATTTAATATCTC TAGCTATGTTTTACTCCCATATGGATATTTCTTTAGTGCTGCAAGTGGCATTCACAAGCTTCTGACATAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_184143; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_287937
| Blastp | Actin-interacting protein 1-2 from Arabidopsis with 71.55% of identity |
|---|---|
| Blastx | Actin-interacting protein 1-2 from Arabidopsis with 71.55% of identity |
| Eggnog | actin filament depolymerization(ENOG410XQN1) |
| Kegg | Link to kegg annotations (AT3G18060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019441466.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |