Ll_transcript_288273

• Id Trinity: TRINITY_DN51336_c1_g2_i16
• Name Transcript: Ll_transcript_288273
• Sequence: ATAAATAGGTGGGAAGAGTGAAGGGTTTATTGTAGTGGTAGTAAAAGAATAATTACAGCGAGGTGGCGAGTATAAAGCACAATAATAGATTAATAATAGG AGGCCTATATATAAAAATTCTATGTTAGGTTGGGACGAACGAACAAACAAAGCACAAGAACAATAGAGAGAGAGAGAGAGAGAAGAATAGGGGGTATCGT ACAAGAACATCAAGAAAAGAAACTCTGGAGATTCCACCTTTTCCCGTCCTTCGCGACGGTGTTTTTCATCATCACTCTTCAGGTTGGCCTGGGTTTGAAT CTAAAGGGTCGTGATTTATATTGAGACATGGAGGGAGCCACTTTCTGGACAAATGGTTACCAGTATCAGTTTTTTGCATTCCAAGAAGTGCTTGATTGGC GGTTTTTTGCCCTCGGAGATTTTGTTTCTGTTTCCTTTGTTAACAGCACTTAGTGTTCTCTTCCCCTTTTAAGGATGGTAATTAATACTGATAGAAGTGC TGCATCTTTAGTGCGCTCTTACAATGCATTGCTGACCATACATTCAGTTAAAACTTCTGGTAAATCCTCTTCTAGGGTAAGAGATCAGATTGGTGACTGA ATATTTGATGCTGCTTGCATCTTTGACTGAAGCATTTGCATTGAATCAGTGCAGACTGTAGTTACTTGCCATTGTTGTCTTGTTTCTCTTGATGGGTATT GCTTGTGAAACTGCATCCTTTACATGTTCTGAAACAAATCCTACATAACTTAGATGAAATAGTTAGTATTACAGTCCCGAAGTCTCTGGCCTGGGGGGTC TATTAATGAATAAGGCTGTGCAACCATTCCACCAGAAAGTTTCTGCTTCTGTTCCCTTTGACGTGACAGAAAATTGATGGTGGCTTTTGCGGGGCTAGCA GGCATCAATTAATATTTTATACACCTACAAGCATTGTCTGCAAGAGATATATGCCATCTATCTTTTTTGTTTTTGTTTAGTTTTGTTGAATAAAGAAAGA GCTTCTGTTATTCGGGACCAATAAAGGTGTTGCTTTGTGTTTTGTTGAGGAAAGAAAGAGCTTCTTTGTGTTCCAATGGAGAGGTACAACTTAATTAAGG AAGTTGGCGATGGGTCATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCATG GGAGGAATGTGTAAATCTGAGAGAAGTCAAGTCATTAAGAAAGATGAACCATCCAAATATCGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTCTA TACTTTGTTTTTGAATATTTGGAATGCAACCTATATCAACTTATGAAAGACAAGCAAAAACTGTTTTCTGAAGGTGAAGTTAGAAATTGGTGTTTTCAAG TTTTCCAAGGTCTTGCTTATATCCACCGGAATGGATACTTCCATCGTGACATGAAGCCTGAAAACTTACTGGTTACTAAGGATATCATAAAAATTGCTGA TTTTGGCCTAGCCCGTGAGATAAGTTCACAGCCGCCCTACACCGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTTATCTG TATGGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTGTTTTCTCTCCGTCCTCTTTTTCCGGGTGTCAGTGAAGCAGATGAAATCT ACAAAATATGCAGTGTCCTAGGCAGTCCAACAACTGAGTCATGGGCTGATGGACTCAAACTTGCAAGAGATATTAACTATCAATTTCCACAGCTTGCTGG TGTACAACTTTCTTCATTGATCCCATCCGCAGGTGTTGATGCAATCAGCCTTATCACATCACTTTGCTCATGGGATCCTTGCAAGAGGCCAACAGCTTCA GAGGCCCTACAACATCCTTTCTTCCAGAGTTGCTTTTACATCCCTCCATCCCTTCGCACCAAAGCAGTAGCCAGAACTCCACCATCTTCTAGCGTCAGGG GAGCATTAGATAAGCAAGCAGTCAAGAGACATGCTGATGCTTTGCCTAATTCAAAGTTCACCAATGTTTTTCCTTCACCGAAATTACATCCATCTTTAGC TTTAGGTGCTCTAATTGTTTTCAACCATATATAGACTATTTCCATAAATGTATCCATGTTTTTTTTCTGGCATGCGTTATATCATTCAATCTCGTTAGAA TTGTCGTCGGTTTAATCAGAGAGAAAAACATGTGAACTGCTAAAATATATCTGAATGATGGAAACTAAACAATGAACAAGAAATATATCTAAGCTTAGTC TCATTTGGTAGGCCCCATTTGTTTGTGGTTGTGGCATACTCCATTTGCATTTAAAGTGCAGAACAAACTATTCACTCATTTCAGAACATTACAGGTGTGC AACGCAAGCTGGATATGACAAATGAAGATGGAGTTAAGAACGATAAGTCAATGAAGACTAGTAGGCAACCAAAATATCGACCTCCGGGAAAGGAAAGTCC AACAGCTTCAAGTAACAAGGTTCAGAATGCACGACGGGTTTCCGAAACTACTGAGAAGTTGGCTAATATGTCTGTTGGTACACGAAGATGGTCCTTCGCG CAGCCCGTTCCGCCTACTACACTGAAGAACAGAGTCAATTTGGTTTCTGAATCTGGACAACATGTTCCAACTACAAGAAGAACTTATACAACAAAAGTTA CCAGATGAATGAAAAGTAAGTGCTCACTCTTGAGATTCTTTTCAATACTTTTTGCATTTGTCATGACCAATATGATGAAACTCTAATCTAAAAACCACTC CTATTTTTCTTAGTATTAAGTGATTGATTGATATATTTGTACCTATGCTTTTTAATATTGTAGCAAAGATTTTATTTTAAATAATGTGGATGTTCAACAT GGTATTCATGCATCATAATGTGTAATAATATATAAGAAACCTGTGCATGAATTTAATTAGAGAGCGACTACATAATTTTATTAATGAAAATGTTATTTAT TGTGATAACTCTGCAAGTTCAGTTTCCTGAAGCAAGTTATTTATTGTGTTTATTAATAAAT
• Tissue: pods
• Gene name: LI_gene_184166;
• Additional information: details;

Expression of Ll_transcript_288273

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 1.4
• PS2: 0.3
• PS3: 0.5
• PW1: 0.7
• PW2: 0.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288273

• Blastp: Cyclin-dependent kinase F-4 from Oryza sativa with 69.25% of identity
• Blastx: Cyclin-dependent kinase F-4 from Oryza sativa with 68.83% of identity
• Eggnog: Male germ cell-associated kinase(ENOG410XPBB)
• Kegg: Link to kegg annotations (4330434)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423956.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;