| Id Trinity | TRINITY_DN51336_c1_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_288258 |
| Sequence | GAGAGAATTAAAAAATAAGGGTATCGTAGAAGAACAAGAACAAACTCTGGAGATTCCATCTCTTCCCGTCGTTAGCGACGGTTTTTATTTTCGTCACTAT TCAGGTTGGTCTGGGCTTGAATTTAAAGGTCTGTGAGCTGTATTTTGAGACATGGAGGGAGCTAGTTTCGTGACAAATTGCTACCAGCATCAGTTTTTTG CATTCCAAGAAGTGCTTGATTGGCGGTTTTTTGTCCTTCGAGATTTTCTTCCCGTTTCCTTTGTTAACAGCACTTAGTGTTCTCTTCCCCTTTAATGACC AGCACAGGGTGTGTGATGCTAAATTCTTCTGATACTAGTGCTGCATCTTTAGTGCGCTCGTAAAAGTAAGCAGCTTGTTCGTTTTCTTCTTTTGGATAAT ACCCATCCAAAAGTAGTTTCTTGATAAGTGTTCATTTGATCGTGCATTGCTGACCATACATTCAGTTAAAACTTCTGGTAAATCCTCTACTGGGGTAAGA GATAATATTGGTGACTGAATACTTGATGCTGCTTGCATCTTCGACTGAAGCATTTGCATTGAATCAGTGCACATCATAGTTATTTGTCATTGTTGTCTTG TTGCTCTTGATGGGTATTGCTGGTGACACTACAAGTTATTTGTCATAGTTATTGGTCATCTCAAAGTTCTGAAACAAATTCTACATAACTTAGATGAAGT AGCTAGTATTACAGTCGTGAAGTCTCTGGTTACGTTGATCTTAGGTGGAGATTAATGCTAATGCTTGGATCAATCAATTTTGGTCGGACCTGAGAAGTGT CAGTATGATCTCTGGTATTTGTTCACTTCTACTACCTTTGTCCCTCGACCATTACAAAGCCGGGGATCTATTAATGAATAAGGCTGTGCAGTTCTTCCAT CAGAATATTTCTGCTTCTGTGCCATCTTTGCCTTGACAGAAAATTGATGGTGGAGGCATCTATTAATATTTTATACACCTACAAACATCGTCTGCAAGAG ATAAATGCCATCTATCTTTTGTGTTTTTGTTTAGTTTTGTTGAATAACAAAAAAGCTGCTGTGTTCTTCGGCATCAATAAAGAAGGAGGTCCTTTGTATT TTGTTTTATAAAGAAAGCTGATTTGTGTTACTCGGGATCAATGGAGAGGTACAACTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTCTGGAGA GCTATTAATAAGCAAACTGGTGAAGTTGTTGCAATAAAAAAAATGAAGAAGAAATATTACTCCTGGGACGAGTGTGTAAACCTGAGAGAAGTCAAGTCAT TACGAAAGATGAACCACCCAAATATTGTGAAGCTGAAGGAAGTTATTCGAGAAAGTGATATTCTGTACTTTGTTTTTGAGTATTTGGAACGCAACCTATA TCAACTCATGAAAGACAGGCAAAAACTCTTTTCCGAAGCTGAAGTAAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGA TACTTCCATCGTGACATGAAACCTGAAAACTTGCTGGTTACCAAGGATATAATCAAAATTGCTGATTTTGGCCTAGTCCGAGAGATCAGTTCACAACCAC CCTACACGGAGTATGTCTCTACACGATGGTATCGTGCTCCTGAAGTGCTGCTCCAGTCTTATCTCTATAGCTCCAAAGTTGATATGTGGGCAATGGGTGC TATAATGGCTGAGCTGTTTTCTCTCCGTCCTCTTTTTCCGGGTGTCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTTATAGGCAGTCCAACAACT GAATCATGGGCTGATGGACTCAAGCTTGCAAGAGATATTAACTATCAATTTCCACAGCTTGCTGGTGTACAGCTTTCTGTATTGATTCCATCTGCAGGTG CTGATGCAATCAGCCTTATCACATCACTTTGCTCATGGGATCCTTGCAAGAGGCCAACAGCTTCAGAGGCCCTACAACATCCTTTCTTCCAGAGTTGCTT TTACATCCCTCCATCCCTTCGCACCAAAGCAGTAGCCAGAACTCCACCATCTTCTAGCGTCAGGGGAGCATTAGATAAGCAAGCAGTCAAGAGACATGCT GATGCTTTGCCTAATTCAAAGTTCACCAATGTTTTTCCTTCACCGAAATTACATCCATCTTTAGCTTTAGGTGCTCTAATTGTTTTCAACCATATATAGA CTATTTCCATAAATGTATCCATGTTTTTTTTCTGGCATGCGTTATATCATTCAATCTCGTTAGAATTGTCGTCGGTTTAATCAGAGAGAAAAACATGTGA ACTGCTAAAATATATCTGAATGATGGAAACTAAACAATGAACAAGAAATATATCTAAGCTTAGTCTCATTTGGTAGGCCCCATTTGTTTGTGGTTGTGGC ATACTCCATTTGCATTTAAAGTGCAGAACAAACTATTCACTCATTTCAGAACATTACAGGTGTGCAACGCAAGCTGGATATGACAAATGAAGTAAGTTGT TCTCCTTTCTACTTTGTAATTCTGTTCTTCCTCCATCTATCTTCTTGACCAGTACCATGATCATCACACTTTCTTTTGTCGATTTATTTGGTGCCTGTCA TAAAAATGAGTAGTGTTAATATAAGACTCAGGTTCATGGCGCTTCCTAGGGTTGAAGCATAGCCAACATGGAGTTTTCATAATATGCACATATTCGTAAT TCAAATTCGTACGAATGGTACATATGCTGTCATGTATAGAGTTCAACCTGAGTCTATATTTGAGGTCTTTCTTAATAGAGTAGCTATTTGGTAATGCTTT GCTGGACTGAATAACATTGTTCACTTGTGAACATTTTTTTTTCTCAAATTCTGTCATGCCAACAATTTCTGATTCTCCTATAGGATGGAGTTAAGAACGA TAAGTCAATGAAGACTAGTAGGCAACCAAAATATCGACCTCCGGGAAAGGAAAGTCCAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_184166; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_288258
| Blastp | Cyclin-dependent kinase F-4 from Oryza sativa with 70.06% of identity |
|---|---|
| Blastx | Cyclin-dependent kinase F-4 from Oryza sativa with 70.06% of identity |
| Eggnog | Male germ cell-associated kinase(ENOG410XPBB) |
| Kegg | Link to kegg annotations (4330434) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421612.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |