Ll_transcript_287452

• Id Trinity: TRINITY_DN51337_c0_g1_i16
• Name Transcript: Ll_transcript_287452
• Sequence: CTCCGTTGTTCTTCACCTGTCTCTTTTCTCTCTCTTTCTCTCTAAAATCTCAGAGCTCTGAATTGCCCCTTACTCTTCGATTCCAGGAGTAATAGTAAGA TAGTGCTTGATCAGGGATGGCTGGGATTGCGAGTGAGGAGTTGGGAGTCGGAAAGTCTGTGGAGGGAATTTCAAGTGTGCAGCATTGTCAATCTGTGGAA GCATTGGCGGAATGGCGGTCTTCTGAGCAGGTGGAGAATGGAATTACATCGACTTCACCTCCTTATTGGGACACTGATGATGATGACGATGGACCAAAAC CTGGCGATTTATATGGAAAAAATACATGGAAGATAGAAAAATTTTCTCAGATTACCAAAAGGGAACTGCGCAGTAATGCATTTGAGGTTGGCGGCTACAA GTGGTATATATTAATTTATCCACAAGGATGTGATGTTTGCAATCATCTCTCTCTGTTTCTTTGTGTAGCAAATCATGACAAACTTCTTCCAGGGTGGAGT CATTTTGCTCAATTTACAATAGCTGTGGTCAATAAAGACCCGAAGAAATCAAAATATTCTGATACATTGCACCGATTTTGGAAGAAGGAGCATGATTGGG GATGGAAAAAGTTTATGGAGATTTCAAAGGTGTATGATGGCTTTGTTGACAATTCTGACAATCTGATAATAAAAGCCCAAGTTCAAGTCATTAGGGAAAA AGCTGACAGGCCTTTTCGTTGCCTGGATTGTCAGTATAGGAGAGAGCTTGTTAGGGTATATTTGACAAATGTTGAACAAATTTGCCGGCGTTTTGTGGAA GAGAGAAGAGGAAAGCTTGGAAAGTTGATAGAGGATAAAGCTAGGTGGTTGAGCTTCTGTACTTTCTGGAGGGACATTGATCAAACTTCTAGGCGCCGCA TGTCTAGGGAAAAGACAGACGTCATTTTGAAAGTAGTTGTAAAACATTTCTTTATAGAGAAAGAAGTGACTTCTACTTTGGTAATGGACTCCTTGTATAG TGGATTGAAGGCTCTTGAGTGCCAGACAAAGAGCAAGAAAGGTAAGACAAAGTTGTTGGATGCTGAAGAAATTGCACGACCAATTGTTCGTATTGAGAAA GATATGTTTGTGCTGGTGGATGATGTTTTACTTCTACTTGAGAGGGTTGCCATAGAACCTCTACCTCCGAAAGAGGAGAAAGGTCCTCAAAATCGGACGA AGGATGAAAGCTCTGGGGAGGACTTCAATAAGGATTCTCTAGAGTGTGATGAAAGGCGTCTCATGGAATTGGGTCGCAAGACTTTGGAAATATTTGTCCT TGCCCATGTATTCAGGTAGTATATGCTATTAGTTCTGGACTTCTGAAGTTTCCTAGGTTAACTGTTAACTCCTTGTTTATATACTTCTGATGTTTATTTC TTGTTCCTTCCTGTATTAATTTTTGGAGATCTCCTGCATGTTTGGATGTTGTTTGTTAGTGATGATCATTAGAAACTAGACTCCTTTAATTCACACCAGT CAGTTTTGAAATCCAATTCCTTATATTTTATTATTATATTTGCAGGTTGTAATTTCATTTTTTTTCTATTCAATCTGTTAACTTTATGGTAGAATATGAA GTTATCTTTGCCATGGCTCCTTCTGCGAATTAGATAATCTGTTTTGATCTGATATTCTTCCTATTTGATAAAGAATGTAGGATTTTGGGATCTTTTACAC TTCACTAACAACCTTATTTGTAGCAAATGGCATGAAATTCTGAATATTTAGTGTGTATTGTGCGAACAGGATCACATGTACCAAAGCCTGTCCTAATTCC CTGTCCCTGCCAATTAAAAATTGAAACATAAATAAATAGAAATTTTTTAAAAACAAAATGCTGCATTTCTATATTACTTGCCTAATACTGATTGGGTCGG GACAGAGTTTGGGGACAAGATGTGGGATAGAGAATCTGTGTCTGTATTGTGCACCCTTTGTATTCTTCCTTCTGAGCCATATTCAGTTTGGAACCTGTAA TATATAGAATGTACAAGAATAACCATTGGAGATGGGAATCAAATTTGGTAATAATTAGTACCTAGCTAGACACAGGAGATGTTATGCAGCTAGAAACATG GTTGACAAGATGGAGATCTTACATAAGATTGGAAGGGGAAGGTGAACATGCAAAATGTGTGATCTTAAGTTGTAATACGGATCATAAGACCCGGCCAAAC ATTAAAAAATAAATACATGAAAAAATAAATCCGTGGAAGAATATATATGATGGATATATCAGAAATTGGGTTATAAATTATAATGAACTCTTGGTTTCTA AATATATTTTTATTTCGCAAAATTCCAATTATCTATTTCATTGTGATAGCAACTGACAAAGGATACTAATATTCAAGGGAGATCGGTACGAAGTTGAACA TGTGTGTTAAAAAAAAAACAATGAGACAACGGAGAGTGTGATACAAAGGAGTGTCGTGAAAGAGGAAGAAGGCTTAAGCGTTAAGCCATCAAACTGTATA GTCACTGCTGCATGCCTCACCATTGCTTTACTTAACAATCGTCCAGTGACTCCAGTCTGCCACTCTCATCAGGTACCCAAGTTTGTTTGGGTTTTAGGGG AGAGGTTTAAGTTTGAGTTTTAGGTTTTTTCAGGCTAAAGACTAGGTTTAGGCATAATTTGGGCTTAGCCTGTTTACAACGTAACAGCTAAAACCTGTTA AAGTCAGAAATGCTGAATCGAGGAAAATCACCACGATTCAAGCGGTCTTGCGAACTTCCCCGTCAATCGTACCAAGTCCACATCTCTATGAGTTTGAGGT CTGATATGAATCGCCAGGGGCTGCAATAATGGTAAAATCAATGATCTTATGCGATAAATTGCGATTTTGTAGTGTGATAGCCAATAGTTTCATATGGTTT TGCAATTAAGCTTGGAGAGGACCACGGAAGTTCATCAACGAGCATGTAGTGCAATGTCATTATCTGCACAACAATGAAGATGAGGTTGTCATTGTCTACA CAAGGTTCTTGCTTTTTTATTAGGTGTTGACTCTATGATAATATATGTAAGGTGTTTACTATGTCTGTACTGCTCATTCTTTTATTTGATATGCTTTTAC ATGTGTTGACTATTGTTGGTCCTAAATGGATTAGGATATCATTACTACTTAATTTTTGCAGCAATAAAATTGAGGTTTCCTACCAAGAAGCCGTTGCTCT GAAGAGACAAGAAGAGCTCATCCGTGAAGAAGAGGC
• Tissue: pods
• Gene name: LI_gene_184171;
• Additional information: details;

Expression of Ll_transcript_287452

FPKM

• PAB: 0
• PNAB: 0.3
• PS1: 0.3
• PS2: 0
• PS3: 0.1
• PW1: 0.1
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_287452

• Blastp: MATH domain-containing protein At5g43560 from Arabidopsis with 73.07% of identity
• Blastx: MATH domain-containing protein At5g43560 from Arabidopsis with 73.07% of identity
• Eggnog: math domain-containing protein(ENOG410ZKXJ)
• Kegg: Link to kegg annotations (AT5G43560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452191.1)
• Pfam: MATH domain (PF00917.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;