Ll_transcript_287435

• Id Trinity: TRINITY_DN51337_c0_g1_i2
• Name Transcript: Ll_transcript_287435
• Sequence: GAAAAACAGAAAAAAATATTATTCGTTTTTTGTTTAGGCCTTTGCTCTTCTGTGTTGTTGTTGCTGAACCTGTTTCTTCGTTATCTCTCTAAAATCTCAG TTCAGGTTTCTGATTCTCCTCTTTTCACAAACCTCCGCCCTTCGATTCCAGTTAGTGTTGTAAGAGGGGTATCAGTAAAATATTTCTCGACCGCAAAATG ACTGGGATTGTGAGTGAGGAGTCTGGGGTGGGAAAGTCTGTGGATGGAATTTCAAGTGGGCAGCGTTATAATTCTGTGGAAGCATTGGCAGAGTGGCGGT CTTCTGAGCAGGTGGAAAATGGAGTCACATCTACTTCACCCCCTTACTGGGACACTGATGACGAAGATGACTGTGGGATGAAACCTTCTGAGTTATATGG AAAATATACATGGAGGATAGAAAAGTTTTCTCAGATTACAAAAAGGGAACTTCGCAGTAATGCATTTGAGGTTGCCGGCTACAAATGGTATATTTTAATT TATCCACAAGGCTGTGATGTTTGCAATCATCTCTCGCTGTTTCTGTGTGTGGCTAATCATGACAAACTTCTTCCAGGATGGAGTCATTTTGCACAATTTA CGATAGCTGTGGTCAATAAAGACCCAAAGAAATCAAAATATTCAGATACATTGCATCGATTTTGGAAGAAGGAGCATGACTGGGGATGGAAAAAGTTCAT GGAGCTGTCTAAGGTGTATGACGGATTTGTTGACACGTCTGACAATCTGATAATAAAAGCTCAAGTTCAAGTCATTAGGGAGAAATCAGACAGACCTTTT CGTGGCCTTGATTATCAGTATAGGAGAGAACTTGTTAGGGTATATTTGACAAATGTAGAACAAATTTGCCGACGTTTTGTTGAGGAGAGGAGAAGCAAAC TCGGGAAGTTGATAGAGGATAAAGCTAGGTGGTCAAGCTTTTTTGCTTTCTGGCGGGAAATTGACCAGACTTCTAGACACAACATGTCTATGGAGAAGAC AGATGTAATTTTGAAAATTGTTGTAAAACACTTCTTTATAGAGAAAGAAGTCACTTCCACTTTGGTAATGGACTCCTTGTATAGTGGATTGAAGGCTCTT GAGGGCCAGACTAAGTGTAAGAAAAGTAGGGTAAAAATGTCGGATGCTGAAGAATTGCCAGCACCAATTGTTCGTGTCGAGAATGATATGTTTGTACTGG TGGAAGATGTTTTACTGCTACTTGAAAGGGCTGCTACAGAACCACTGCCTCCAAAAGATGAGAAGGGTCCTCAAAGCCGTACAAAGGATGGAAACTCTGG GGAGGATTTCAATAAAGACTCTATAGAACGTGATGAAAGGCGCCTCACAGAGTTAGGTCGCAGGACTTTGGAAATATTTGTCCTTGCCCATGTATTCAGC AATAAAATTGAAATTGCCTACCAGGAAGCTGTTGCTCTAAAGAAACAAGAGGAGCTCATCCGTGAAGAAGAGGCTGCATGGCAAGCTGAAAGTGATCAGA AAGCTAAACGTGGGGTCAATGACAGGGAAAAGAAGTCAAAGAAAAAACAGGCCAAACAAAAACGAAACAATCGGAAAGGAAAGGATAAAGGGAGGGAGGA GAGGACTACTGTGGTTGTTAATGACAAGAACCATGAAGCCAATGCTGTTGATGCGAAAAAGAATATTAACATGGAAGAAGCTTGGACTTTGTCTGAAAAG CCTGATGCCACAGAAGAAGCTCAGACTTTGTCTGAAAAGCCTGATGTCATGAAAGATGTTTCGGATGTGTCTGACTCTGCAGATGGAGTTTCTGTAGTGC TTCAGCCTGACTCAGAAGACAGAGATGCTATTCAGGTTAATTGGGATATTGATGCCCCAGAAATTCATCCTCCAACTGAGGCTAGTAACAATGGCATAGT TGTAGTTTCATCCTTACAAAATGGATTGTCTGAGAAAAGGATCAGTTCGGCGATCGATGATAGTTCTTCAACATGTTCTACTGATTCGTTGCCATCAGTA TTCATGAATGACCCCTATAAAGGGAACTCCTTTTCAAATTATAAATTCCAAAAGTCACCTAACAGAAGAAAGAACCGAGGGAAGGCACCATGTGATGTGG GTCGTTGGACAAATGAAATAGGTAATCAACCATCTGGTTCTGCAGCTAAAGCTGGGGATAATAATGACGACTCTGGAAGTGTTAAGGTTGGGGAATCTGT AACTGAGGGTGCTGTCCTCTCCTTGCAAGATAGGTTAAAGTGGGTCGAGCAGCATGTTGTCAGAAAGGAAGAGGGGGCTCTTTCACTACAAAAGGAACAT AGCATCAAGGACCACATTAAGATAGAGGGACCTGTTGACAATGAAAGTCTACAGAAAGAGAAGATATCAACACTTCCATCCTCACCTATAAGTTCTCCTA GAAACCTATCCTCATCTATTCAAATGAAGTTAGAACATAAAACTAGTGCTACTGTCGATCCTGTTCATGTCAAGAAAACATCTTTAAGTGTCTCCATGTT GACAGATAAAGACGCATCTACACTTTCTGGTTCTACATCACAAGTAACAACCTTGTCCAAATCTGAGATCCAGGAGACTTCAACCGCAAAATTAACTGAG AGATCTGTATCGTTGTCAAGACCTGCTAGTGCTCCTTTAGTTCCTGGTCCCAGGCCAACAGCTCCAGTTGTCTCAATGGTTCAAACAGCTCCCCAACTTG CACGCTCAGTGAGTGCAGCTGGCCGGTTGGGTCCTGATCCCTTATCTGCTACTCATAGTCATGTTCCTCGTTCCTACAAAAATGCGATGATAGGGAACCC TGTGAGCTCGAGATCTGCCAGTCTGTCTTACTCCAGCTCCTCAAGTTCCGGAATAAACTCATCGCTTAGCTATTCTCAACCATCTTCAATGGTGCCATCA CCAGTATTCTTACCGCAGAGCTCTGACAGAATGAATTCTAATGCTGGCCAATCTGGTGTTCCCTTTGGTATGGGTTCATGTGATAACCTGCAGAATGGTC CCCAGTGGATGGAGAGTTCTCAAAGGGAAGCGAGCAGAAGAATGCCTTATGATCAACCCTCCCGGATCAATGATGTCCTGAACCATGACTTGTACAGGCC ATTACAGAGTAGATCTATGGGCAACATCTTGACTGAGTTCCCAGCCTGCACATCCGGTCGTCAGAACCAAGGTTTTTTAGTGGATGAGTTCCCACACCTT GATATTATCAATGACCTGCTTGATGATGAACATGGTATTGGGAAGACGCAGGTGGCTAGTTCAGTATTTCAGCCACTGGATCGCAGAGCACAGCTTCTAA ATCGACAGTCCACTTGTCCTGGAGACTTGGGTGCAGATGGTAATTTGGGATCCTCAGCCAGTTCTTGCAGGTTCGAGCAATCACGAAGTTACCATCATGA TCATCAATTTCAAGGAGGGTATAGCTCATCTAGTGGGAATTTTGATTCACCAAGGGTCTATGTTCCGCATACAAGTACGGCACCCTATGTCAATGGGCAG GTAGATAGCTCGGTTCCAAACCAATGGCAGGTGGCTGGTTCTGATCTGTCATATCTGGGCATGAGAAACTCGGAGAATGGTGGTTACTCATATTATCCTG ATTACTCAAATATGGCAGGTGGTGTCAATGGTTATACTGTATTCAGGCCCTCAAATGGTCTTTATAGGGAAAGATGAAGGAGAATGTGTGTCCATGAATG AGTGGTCACTAACAATTGCAATAATGTGTTTGAGGAAATTGTTGGAACTCTTTATAGATTGGAGTGAGGGTTTAATCTCTATCCATCAAATTTGTACAAC TTCCTTTTTATAAAAAATGAAAGAAGAGTTACACAAGTTCTCTTTCTTGCTATTACCCCCTTTTCTTTATCCAAAGAGAAAAGGTTGTTCAAATTTGTTA TACACATTAAAATACAGAAAACATTTTGAAAGAAAAAATGTCGCCAAAACATTGCAGACGGCATTATTTTCAGAAGTGTCTTTTGCACTTCATGTGTATA CATCAAATTGGATAATTTCCTTTTTGAGAAAAGAAAAATGGGAAAAATAGTTTTTCTAATCTTTATCCATGAAGACATATTAAAGATTCCAATAAAAGTA CATTTTAATGGGAAACGTTATATTTGAAATGTAATATACCCAGTTTTCATAAGTAACATCTTTGAGTATTTATGTGTGATTATCATGTATAGTAAATTAT AG
• Tissue: pods
• Gene name: LI_gene_184171;
• Additional information: details;

Expression of Ll_transcript_287435

FPKM

• PAB: 1.8
• PNAB: 3.5
• PS1: 6.4
• PS2: 8.8
• PS3: 8.4
• PW1: 3.6
• PW2: 5
• PW3: 9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_287435

• Blastp: MATH domain-containing protein At5g43560 from Arabidopsis with 48.72% of identity
• Blastx: MATH domain-containing protein At5g43560 from Arabidopsis with 48.46% of identity
• Eggnog: math domain-containing protein(ENOG410ZKXJ)
• Kegg: Link to kegg annotations (AT5G43560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461140.1)
• Pfam: MATH domain (PF00917.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;