Id Trinity | TRINITY_DN51341_c0_g1_i16 |
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Name Transcript | Ll_transcript_289927 |
Sequence | GGCCCTGCATCATATAGGTGGTCTCCACGTATTTTGATGATACACGTGTGCAATAGCAATTGGTGGATGAAGGAGAGCACACGCAAATGTAACCGCATGG GATGAAAACCTTAGAACAATGATTGAATGGTACAAAAGGCAATGAGTTGAGAATTGAGATCAGATCTAAAATCAAAATCAAAATCAAACAAAATCTTCTT CTCCCTTCTCTCTTTGATTCATTTCACATTCGGATCTGATCTGATCCAAAATCCAATTAATCAAAAAATGCCATCTGTGTACGGAGCTCGATTAACAACC TTCGAAGATTCAGAGAAGGAGAGTGAATATGGTTACGTTCGCAAGGTTTCAGGACCAGTGGTGGTGGCTGATGGCATGGCCGGGGCTGCTATGTATGAAC TTGTTCGTGTCGGTCGTGATAACCTCATTGGTGAAATCATTCGTCTAGAAGGAGATTCTGCTACTATTCAAGTGTATGAGGAAACTGCGGGATTGATGGT TAATGATCCAGTGTTGCGGACACACAAGCCTTTGTCTGTGGAGTTAGGGCCTGGAATATTAGGAAATATTTTTGATGGGATTCAGAGGCCTTTGAAAACT ATTGCTAAAAGATCTGGCGATGTCTATATTCCCCGTGGTGTCTCAGTTCCAGCACTTGACAAAGATACACTATGGGAATTTCAGCCTAAAAAAATTGGTG AAGGAGATCTATTGACTGGAGGAGATCTATATGCTTCTGTTTTTGAGAACACCCTAATGCAACACCATATTGCACTTCCTCCCGATGCCATGGGAAAGGT TACCTACATTGCACCACCTGGTCAATATGCCTTGAAGGATACTGTGTTGGAGCTTGAGTTTCAAGGTGTGAAAAAGAAGTTCACCATGCTTCAGACTTGG CCTGTGCGTACACCAAGGCCTGTTGCATCAAAACTCGCTGCTGATACTCCTCTTCTCACTGGTCAGCGTGTTCTTGATGCCCTTTTCCCCTCAGTTCTTG GTGGGACTTGTGCCATACCCGGAGCTTTTGGTTGTGGTAAAACAGTCATTAGTCAGGCTCTTTCTAAGTATTCCAACTCTGATACTGTTGTTTACGTTGG TTGTGGGGAGCGTGGAAATGAAATGGCAGAGGTTCTGATGGACTTTCCACAACTTACAATGACCTTGCCTGATGGTCGTGAGGAATCTGTCATGAAGCGT ACAACACTAGTTGCTAATACTTCAAACATGCCAGTGGCTGCTCGTGAAGCTTCAATTTACACAGGAATCACTTTGGCTGAGTATTTCAGAGATATGGGTT ATAATGTCAGCATGATGGCAGATTCAACATCTAGATGGGCAGAAGCATTGCGTGAAATCTCTGGACGACTGGCTGAAATGCCCGCAGATAGTGGATATCC TGCTTACCTTGCTGCACGTTTAGCCTCTTTCTATGAACGTGCTGGGAAAGTAAAATGTCTTGGAGGTCCTGAACGTACAGGTAGTGTCACAATCGTTGGT GCTGTTTCTCCACCTGGAGGAGATTTTTCAGATCCTGTGACTTCTGCAACCCTCAGTATAGTTCAGGTTTTCTGGGGATTGGACAAAAAGCTTGCTCAGA GGAAGCACTTTCCTTCTGTGAACTGGCTTATTTCTTATTCAAAATACTCAACAGTATGCTCTAAAATTCTTCATATGTAGACATATAGTTCCTGCTTTGA TTCTATAATTTTTTTAACTTTTTTTATACCTGTAGGCGCTCGAATCCTTTTATGAGCAATTTGATCCAGATTTTATTAACATTAGGACAAAAGCTCGTGA AATTCTTCAAAGAGAAGATGATCTGAATGAGATTGTCCAGGTGTGTTCTTTTATTCACTCTATCATCTTCATTGTAGGTTGAAGAAATGTCTCCATGCCC TCTCCTAACATGGGATTAATAATTGCCCAGCTTCAACTTCTTGGGCTAACAGAGTTATCATAAGTAACCTGAGAACAGACTGTTAAGTTGCATAATCTTT TAAATATGGGTTGCAAGGTATAGTCAAATCAATCCGTAGTCTGATAAGTGGTGCTTACACTGCTAAATTACGCACTGATTTGCAGTTTGGTGAAAATTTG ACAGGAGATCTATTTGTATGTTCTTTAACTAGTAAAAACTAAACTGGATCATTTATTGACCATGTAAATTACTCCACAGCTTGTTGGTAAGGATGCTTTA GCTGAAGGAGATAAGGTCACCTTAGAAACTGCAAAGCTTTTGAGAGAGGATTATCTTGCTCAAAATGCTTTTACACCGTATGACAAATTCTGTCCCTTCT ACAAGTCTGTTTGGATGATGCGCAACATTATCCATTTCTACAATTTGGCAAATCAGGCGGTCGAGAGAGGAGCTGGTACAGATGGTCAGAAAATAACTTA CAGCCTTATCAAGCATCGTATGGGAGATCTTTTCTATCGATTAGTGTCTCAGAAATTCGAGGATCCAGCAGAAGGTGAATCTGCTTTGGTTGCCAAATTT AAGCAGTTGCATGAGGATCTGACAAGTGGTTTCCGCAACCTGGAGGATGAAGCCCGATGATTGCAGATTGCAAGCAGGCTCAAAGTATAATATTATTCCA ATTGTGAGAGGCAAACAAGGATCCTGTGGTGGCAACATGCTTAGTGTTTTTGCATTATTACTGTTATAGATTTATTAACCGTTGTGCTGGTTTGGCTTTT AATATGTGGTTTCTTGTGTACCTAGAATCATGTGTTCCAGCCATCCCCAGCCCCAGCTATATTTTTAGAATAAGAGATGAACCATGTTCTTTGAATATGT ATTTTGTGGGAGACATGGATTACCTGGATCATGTATTTCATGGATGGATACATTTGGCCTTGTACCAATTAGTATTTTAAAGATCATATATATCAACTTT TACCAAACATGTCGTTGCAAACACATTATTATGAAACATGTTTGAGGTCATTCCTAGC BLAST |
Tissue | pods |
Gene name | LI_gene_184202; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289927
Blastp | V-type proton ATPase catalytic subunit A from Vigna with 98.27% of identity |
---|---|
Blastx | V-type proton ATPase catalytic subunit A from Vigna with 98.27% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019414699.1) |
Pfam | ATP synthase alpha/beta family, beta-barrel domain (PF02874.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |