Ll_transcript_289930

• Id Trinity: TRINITY_DN51341_c0_g1_i19
• Name Transcript: Ll_transcript_289930
• Sequence: GTGAAATGGTGAGTTGTTAGGGAATGACAGAGGTGGCAAGTAATAATTGGTTGGAATGGTAAATGAAGTTTGAGTATATAAAGGTAGAAAACTGCCACGT TCTCTCATTTTCTCATTCTCTCGTTCTTCAGTTCAGATCTTCATCATGTCTAGCGTTTACGGAGCACGGTTAACCACCTTTGAGGATTCCGAGAAGGAGA GTGAATACGGTTATGTTCGAAAGGTATCAGGACCCGTGGTGGTGGCTGATGGCATGGCCGGGGCTGCTATGTATGAACTCGTACGTGTCGGTCGTGATAA CCTCATTGGTGAAATCATTCGTCTCGAAGGAGATTCTGCCACCATTCAAGTTTATGAGGAAACAGCGGGTTTGATGGTTAATGATCCTGTATTGAGGACA CACAAGCCTTTGTCTGTCGAGTTGGGCCCTGGAATTTTGGGAAATATTTTTGATGGAATTCAGAGGCCTTTGAAAACTATTGCTAAGCGATCCGGTGATG TCTACATTCCTCGTGGTGTCTCCGTTCCTGCACTCGACAAGGATATACTTTGGGAATTCCAGCCTAAAAAAATTGGTGAAGGAGATCTATTAACTGGTGG AGACCTCTATGCTTCTGTTTTCGAGAACACTCTCATGCAGCACCATATTGCACTTCCTCCTGATGCTATGGGAAAGGTTACCTACATTGCGCCACCTGGA CAATATTCTTTGAAGGATACTGTGTTGGAGCTTGAGTTTCAAGGTGTCAAAAAGAAGTTCACCATGCTTCAGACTTGGCCTGTGCGTACACCAAGACCTG TTGCATCAAAACTTGCTGCTGATACTCCTCTTCTTACTGGTCAGCGTGTTCTTGATGCCCTTTTCCCTTCAGTTCTTGGTGGGACTTGTGCCATACCTGG AGCTTTTGGCTGTGGTAAAACAGTCATTAGTCAGGCTCTTTCTAAGTATTCCAATTCCGATGCTGTTGTTTACGTTGGTTGCGGGGAACGTGGAAATGAA ATGGCAGAGGTTCTGATGGACTTCCCACAACTTACCATGACCTTGCCTGATGGTCGTGAAGAATCTGTCATGAAGCGTACAACACTAGTTGCTAATACTT CAAACATGCCAGTGGCTGCTCGTGAAGCTTCAATTTATACTGGTGACTTGACTTCTTGCCTCATAAGTTCCAGATCATCTTTTTATTGTTGAGAATTAAT CTTTACAAACTCTTTCTGTTTTTCCTATTGTCACTCTTATATTGTGCATGTGAAAGTCATTTTGTAGTTAAACCAGTAGTGTTTCTCAGCACCTCTACTT GCCATACCTAAACTTTGTAGTTAATCTGGCTTACAGTATCAAAAGCAGGAAGCATCCATACTCTGCACATTGATATGCTCCTCTCTATCTTAATTCCTAT ATTTTTCACCTCAATTGAAACTGTATTATATTTGCACTTCTAATGAACTAGTTTTATCAACCATTGAATGTGAATTTTATTTCGGTAATGTTCATTTAAC CTTAATTTTGTTGTGTTTCGTAATCTCAGGAATCACTTTGGCTGAGTATTTCAGAGATATGGGTTATAATGTCAGCATGATGGCAGATTCAACATCTAGA TGGGCAGAAGCATTGCGTGAAATCTCTGGACGACTGGCTGAAATGCCCGCAGATAGTGGATATCCTGCTTACCTTGCTGCACGTTTAGCCTCTTTCTATG AACGTGCTGGGAAAGTAAAATGTCTTGGAGGTCCTGAACGTACAGGTAGTGTCACAATCGTTGGTGCTGTTTCTCCACCTGGAGGAGATTTTTCAGATCC TGTGACTTCTGCAACCCTCAGTATAGTTCAGGTTTTCTGGGGATTGGACAAAAAGCTTGCTCAGAGGAAGCACTTTCCTTCTGTGAACTGGCTTATTTCT TATTCAAAATACTCAACGGCCCTCGAATCCTTTTATGAGCAATTTGATCCAGATTTTATAAACATTAGAACAAAGGCTCGTGAGGTTCTGCAAAGAGAAG ATGACCTGAATGAAATTGTCCAGCTTGTTGGTAAGGATGCTTTAGCTGAAGGAGATAAGATCACCTTAGAAACTGCAAAGCTTTTGAGAGAAGATTATCT TGCTCAAAATGCATTTACCCCATATGACAAATTCTGTCCCTTCTACAAGTCTGTTTGGATGATGCGCAAC
• Tissue: pods
• Gene name: LI_gene_184202;
• Additional information: details;

Expression of Ll_transcript_289930

FPKM

• PAB: 3.8
• PNAB: 14.3
• PS1: 12.8
• PS2: 9
• PS3: 16.6
• PW1: 13
• PW2: 10.2
• PW3: 7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289930

• Blastp: V-type proton ATPase catalytic subunit A from Vigna with 97.9% of identity
• Blastx: V-type proton ATPase catalytic subunit A from Vigna with 97.9% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456749.1)
• Pfam: ATP synthase alpha/beta family, beta-barrel domain (PF02874.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;