| Id Trinity | TRINITY_DN51341_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_289914 |
| Sequence | GGCCCTGCATCATATAGGTGGTCTCCACGTATTTTGATGATACACGTGTGCAATAGCAATTGGTGGATGAAGGAGAGCACACGCAAATGTAACCGCATGG GATGAAAACCTTAGAACAATGATTGAATGGTACAAAAGGCAATGAGTTGAGAATTGAGATCAGATCTAAAATCAAAATCAAAATCAAACAAAATCTTCTT CTCCCTTCTCTCTTTGATTCATTTCACATTCGGATCTGATCTGATCCAAAATCCAATTAATCAAAAAATGCCATCTGTGTACGGAGCTCGATTAACAACC TTCGAAGATTCAGAGAAGGAGAGTGAATATGGTTACGTTCGCAAGGTTTCAGGACCAGTGGTGGTGGCTGATGGCATGGCCGGGGCTGCTATGTATGAAC TTGTTCGTGTCGGTCGTGATAACCTCATTGGTGAAATCATTCGTCTAGAAGGAGATTCTGCTACTATTCAAGTGTATGAGGAAACTGCGGGATTGATGGT TAATGATCCAGTGTTGCGGACACACAAGCCTTTGTCTGTGGAGTTAGGGCCTGGAATATTAGGAAATATTTTTGATGGGATTCAGAGGCCTTTGAAAACT ATTGCTAAAAGATCTGGCGATGTCTATATTCCCCGTGGTGTCTCAGTTCCAGCACTTGACAAAGATACACTATGGGAATTTCAGCCTAAAAAAATTGGTG AAGGAGATCTATTGACTGGAGGAGATCTATATGCTTCTGTTTTTGAGAACACCCTAATGCAACACCATATTGCACTTCCTCCCGATGCCATGGGAAAGGT TACCTACATTGCACCACCTGGTCAATATGCCTTGAAGGTTTTCCTTTTCATCTCTAACAACATCATTCTTAACTATATTATTTATTTGTTTACGGATCTT CAATTTTGATGTGTTCTGGAGGTTCTCTATATTTTATTCTGTATATGATCTTTTAGTCTTTATATAAATTTACAGGATACTGTGTTGGAGCTTGAGTTTC AAGGTGTGAAAAAGAAGTTCACCATGCTTCAGACTTGGCCTGTGCGTACACCAAGGCCTGTTGCATCAAAACTCGCTGCTGATACTCCTCTTCTCACTGG TCAGCGTGTTCTTGATGCCCTTTTCCCCTCAGTTCTTGGTGGGACTTGTGCCATACCCGGAGCTTTTGGTTGTGGTAAAACAGTCATTAGTCAGGCTCTT TCTAAGTATTCCAACTCTGATACTGTTGTTTACGTTGGTTGTGGGGAGCGTGGAAATGAAATGGCAGAGGTTCTGATGGACTTTCCACAACTTACAATGA CCTTGCCTGATGGTCGTGAGGAATCTGTCATGAAGCGTACAACACTAGTTGCTAATACTTCAAACATGCCAGTGGCTGCTCGTGAAGCTTCAATTTACAC AGGAATCACTTTGGCTGAGTATTTCAGAGATATGGGTTATAATGTCAGCATGATGGCAGATTCAACATCTAGATGGGCAGAAGCATTGCGTGAAATCTCT GGACGACTGGCTGAAATGCCCGCAGATAGTGGATATCCTGCTTACCTTGCTGCACGTTTAGCCTCTTTCTATGAACGTGCTGGGAAAGTAAAATGTCTTG GAGGTCCTGAACGTACAGGTAGTGTCACAATCGTTGGTGCTGTTTCTCCACCTGGAGGAGATTTTTCAGATCCTGTGACTTCTGCAACCCTCAGTATAGT TCAGGTTTTCTGGGGATTGGACAAAAAGCTTGCTCAGAGGAAGCACTTTCCTTCTGTGAACTGGCTTATTTCTTATTCAAAATACTCAACAGCGCTCGAA TCCTTTTATGAGCAATTTGATCCAGATTTTATTAACATTAGGACAAAAGCTCGTGAAATTCTTCAAAGAGAAGATGATCTGAATGAGATTGTCCAGCTTG TTGGTAAGGATGCTTTAGCTGAAGGAGATAAGGTCACCTTAGAAACTGCAAAGCTTTTGAGAGAGGATTATCTTGCTCAAAATGCTTTTACACCGTATGA CAAATTCTGTCCCTTCTACAAGTCTGTTTGGATGATGCGCAACATTATCCATTTCTACAATTTGGCAAATCAGGTACATTAGAATTAAGAATGTAGCCAT TTAACTGCAACAGCTCAACGATTCATCTCATCTTTTCTGCTACCTTTAACTCACAATTTATGATGCAAGATATTGTTCGTTTCTTTGTTTCTACATTCTG CTCAGCCAATTTTTGGGTTGAAAAGGAGATTTAAGTTAGGATGAGTAAATTGCATTGAAATTTAACATGGACTACTGGCTTTATGTCTTTAGGCGGTGGA GAAGGGAGCTGGTGCAGATGGTCACAAGATTACTTACAGCCTTATCAAGCATCGAATGGGAGATCTCTTCTATCGATTAGTGTCTCAGAAATTTGAGGAC CCTGCAGAAGGTGAATCTGCTTTGGTTGCCAAGTTTAAGCAGTTGCACGATGATCTGACTAATGGTTTCCGCAACCTTGAGGATGAAAGCCGGTAATTGA AGATGGGTGAAAGTATAATGTTATTACAATTGTGAAAGGCAAACAAGGATGTGGTGGTGTTTTTGTATTTGACTGTTATATATTCTTTCAGTTCACACAA TTGTGCTGGTTTTTGGCTTTTGATGATGTGGTTGGTAGAGTCATGTTTTTCAGTCATCCCCAGTTATTTATTGAGAAATAAGAGATGGACTTGTTCTTTT AATATGTATTTAGTCGAATAAATTTGTTTTAGAAAGTGAAGAATCTGCACTGCATGATTCTGGATTCATTGATGTACTTACTTTGTGGGGGACATGTTGC CTCTTTTATTCCATATTCGACCTTGTAGCAATGAGCATTACTCTTTTGAAAGATATCACATATCAACTTTTAGCAAACAATAAAATATGGATATCAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_184202; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289914
| Blastp | V-type proton ATPase catalytic subunit A from Citrus with 98.57% of identity |
|---|---|
| Blastx | V-type proton ATPase catalytic subunit A from Vigna with 90.7% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414699.1) |
| Pfam | ATP synthase alpha/beta family, nucleotide-binding domain (PF00006.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |