Ll_transcript_289915

• Id Trinity: TRINITY_DN51341_c0_g1_i5
• Name Transcript: Ll_transcript_289915
• Sequence: GGCCCTGCATCATATAGGTGGTCTCCACGTATTTTGATGATACACGTGTGCAATAGCAATTGGTGGATGAAGGAGAGCACACGCAAATGTAACCGCATGG GATGAAAACCTTAGAACAATGATTGAATGGTACAAAAGGCAATGAGTTGAGAATTGAGATCAGATCTAAAATCAAAATCAAAATCAAACAAAATCTTCTT CTCCCTTCTCTCTTTGATTCATTTCACATTCGGATCTGATCTGATCCAAAATCCAATTAATCAAAAAATGCCATCTGTGTACGGAGCTCGATTAACAACC TTCGAAGATTCAGAGAAGGAGAGTGAATATGGTTACGTTCGCAAGGTTTCAGGACCAGTGGTGGTGGCTGATGGCATGGCCGGGGCTGCTATGTATGAAC TTGTTCGTGTCGGTCGTGATAACCTCATTGGTGAAATCATTCGTCTAGAAGGAGATTCTGCTACTATTCAAGTGTATGAGGAAACTGCGGGATTGATGGT TAATGATCCAGTGTTGCGGACACACAAGCCTTTGTCTGTGGAGTTAGGGCCTGGAATATTAGGAAATATTTTTGATGGGATTCAGAGGCCTTTGAAAACT ATTGCTAAAAGATCTGGCGATGTCTATATTCCCCGTGGTGTCTCAGTTCCAGCACTTGACAAAGATACACTATGGGAATTTCAGCCTAAAAAAATTGGTG AAGGAGATCTATTGACTGGAGGAGATCTATATGCTTCTGTTTTTGAGAACACCCTAATGCAACACCATATTGCACTTCCTCCCGATGCCATGGGAAAGGT TACCTACATTGCACCACCTGGTCAATATGCCTTGAAGGATACTGTGTTGGAGCTTGAGTTTCAAGGTGTGAAAAAGAAGTTCACCATGCTTCAGACTTGG CCTGTGCGTACACCAAGGCCTGTTGCATCAAAACTCGCTGCTGATACTCCTCTTCTCACTGGTCAGCGTGTTCTTGATGCCCTTTTCCCCTCAGTTCTTG GTGGGACTTGTGCCATACCCGGAGCTTTTGGTTGTGGTAAAACAGTCATTAGTCAGGCTCTTTCTAAGTATTCCAACTCTGATACTGTTGTTTACGTTGG TTGTGGGGAGCGTGGAAATGAAATGGCAGAGGTTCTGATGGACTTTCCACAACTTACAATGACCTTGCCTGATGGTCGTGAGGAATCTGTCATGAAGCGT ACAACACTAGTTGCTAATACTTCAAACATGCCAGTGGCTGCTCGTGAAGCTTCAATTTACACAGGAATCACTTTGGCTGAGTATTTCAGAGATATGGGTT ATAATGTCAGCATGATGGCAGATTCAACATCTAGATGGGCAGAAGCATTGCGTGAAATCTCTGGACGACTGGCTGAAATGCCCGCAGATAGTGGATATCC TGCTTACCTTGCTGCACGTTTAGCCTCTTTCTATGAACGTGCTGGGAAAGTAAAATGTCTTGGAGGTCCTGAACGTACAGGTAGTGTCACAATCGTTGGT GCTGTTTCTCCACCTGGAGGAGATTTTTCAGATCCTGTGACTTCTGCAACCCTCAGTATAGTTCAGGTTTTCTGGGGATTGGACAAAAAGCTTGCTCAGA GGAAGCACTTTCCTTCTGTGAACTGGCTTATTTCTTATTCAAAATACTCAACAGCGCTCGAATCCTTTTATGAGCAATTTGATCCAGATTTTATTAACAT TAGGACAAAAGCTCGTGAAATTCTTCAAAGAGAAGATGATCTGAATGAGATTGTCCAGCTTGTTGGTAAGGATGCTTTAGCTGAAGGAGATAAGGTCACC TTAGAAACTGCAAAGCTTTTGAGAGAGGATTATCTTGCTCAAAATGCTTTTACACCGTATGACAAATTCTGTCCCTTCTACAAGTCTGTTTGGATGATGC GCAACATTATCCATTTCTACAATTTGGCAAATCAGGCGGTGGAGAAGGGAGCTGGTGCAGATGGTCACAAGATTACTTACAGCCTTATCAAGCATCGAAT GGGAGATCTCTTCTATCGATTAGTGTCTCAGAAATTTGAGGACCCTGCAGAAGGTGAATCTGCTTTGGTTGCCAAGTTTAAGCAGTTGCACGATGATCTG ACTAATGGTTTCCGCAACCTTGAGGATGAAAGCCGGTAATTGAAGATGGGTGAAAGTATAATGTTATTACAATTGTGAAAGGCAAACAAGGATGTGGTGG TGTTTTTGTATTTGACTGTTATATATTCTTTCAGTTCACACAATTGTGCTGGTTTTTGGCTTTTGATGATGTGGTTGGTAGAGTCATGTTTTTCAGTCAT CCCCAGTTATTTATTGAGAAATAAGAGATGGACTTGTTCTTTTAATATGTATTTAGTCGAATAAATTTGTTTTAGAAAGTGAAGAATCTGCACTGCATGA TTCTGGATTCATTGATGTACTTACTTTGTGGGGGACATGTTGCCTCTTTTATTCCATATTCGACCTTGTAGCAATGAGCATTACTCTTTTGAAAGATATC ACATATCAACTTTTAGCAAACAATAAAATATGGATATCAAA
• Tissue: pods
• Gene name: LI_gene_184202;
• Additional information: details;

Expression of Ll_transcript_289915

FPKM

• PAB: 106.5
• PNAB: 169.9
• PS1: 112.4
• PS2: 92.1
• PS3: 118.2
• PW1: 163.7
• PW2: 164
• PW3: 103.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289915

• Blastp: V-type proton ATPase catalytic subunit A from Vigna with 96.31% of identity
• Blastx: V-type proton ATPase catalytic subunit A from Vigna with 96.31% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426074.1)
• Pfam: ATP synthase alpha/beta family, beta-barrel domain (PF02874.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;