Ll_transcript_288897

• Id Trinity: TRINITY_DN51343_c2_g1_i5
• Name Transcript: Ll_transcript_288897
• Sequence: AAAAAAGATAATTGGGCCTGTGATGGTACTAAAAAGCCCAACTCTGCTAGAGAAAACAAAGAGCCTCTTTCGTCCTTTTCCAATATCCGACAACATCATG AGCCGCTACGACGGCCGCTCCGGCGACCCCACTTCCTACCGTGAACGGCGGAGTGATTCCGGGCTAGGTGCAGCTTCAGGGTATGGTGGATCAGTACACT CTTCATCTAGCAAAACGAATGACGATGGTGGGTCACCGAGGAAGCTCAACTTGGATGGGTTGCCTCATTTTGAGAAAAACTTCTACTCTGAGTCACCGGC AGTAAAGGCAATGACCGAGGATGAAGTTGATGAGTACCGGAAGCGGAGGGAAATAACTGTTGAAGGCCGAGATGTCCCGAAACCTGTAAAGACGTTTCAT GATGTTGGTTTTCCAGTTTGATGATGAAGTGAGCTTGGGACTGAATACAAGTTTGAGGTTTAGTTCTATGGTATGATATGATTGTCAAGCAAAATATTGT GCTAAATGGGATTTCCTAATGGCCAAGGGATCAGTTTGCTTATCTTATTGGACGGCAGCATGTGATATCATTAGATTGAAGTGGTCCAAATTTCGACTTT GAAGAAAACAAGCCATAAAAGAAAGGAGATCATTTTGTTTGGAAATTGTTTTACATTATTATCATGAGAGTACTTTCTTATTTTATGGGATGCCTTGTTT CAGATATCTCCTACTGACTTTACAACCTTGATTTAACCCAGAATATGTAATTCAAGAAATTGAAAAAGCTGGCTTTACCGAACCTACAGCCATTCAATCT CAAGGCTGGCCAATGGCTTTGAAAGGGCGTGATCTGATAGGAATTGCAGAAACAGGATCAGGGAAGACACTTGCGTATTTGTTGCCTGCCATAGTGCATG TTAACGCTCAGCCGATTCTAGATCTTGGAGATGGACCAATTGTGTTAGTCTTGGCTCCAACTCGTGAACTTGCTGTCCAAATTCAACAAGAGGCTACTAA ATTTGGTGAATCATCAAGGATTAAGAGTACATGCATCTATGGTGGGGTTCCAAAGGGACCTCAAGTGCGCGATCTACAGAAAGGTGTTGAAATTGTAATT GCAACCCCGGGAAGGTTAATTGATATGCTCGAGTCAAATCACACTAACTTGCGGAGGGTCACATACCTTGTATTGGATGAAGCTGATAGAATGTTAGACA TGGGTTTTGACCCTCAGATTCGGAAGATTGCCTCTCAGGTTGGATTTATTCTATTATTTGATCAACATGTTGAAGATGTATAATTTCAAGAAATGGCTTA ATAAGTTTTTTGGCCATAGTCAAGTTGCTCTTCTAGAGGCTTCATTCGCTTGCTCAGTTCACTATTCCTTCTTAGTTGCTTATTCATTGCCAATTACGGA TTGTGATGTTCTTGGGTACCCTCCCTCAACCCCATTTTGTTTATATGGAAATATGATTTTCAATGTGATTTTATTTATAAAACAGTTAAAAATAAATTGC TCCCCGAACTGAAGTACTAGGCTCTGCCACTGTTGTCAGTGAATTTGAGTTGAATTAGGAAAGACAGATTGCTGAAGCTGCAGGTTTGAAACATTGAATT TCTTTATTCTCCTAAGTACCTGATTATTATTTTTACTTTTTTTTATGTAGATTCGTCCAGACCGTCAAACTTTGTACTGGAGTGCCACCTGGCCAAAGGA GGTTGAACAATTGTCAAGAAAGTTCCTTTATAACCCATACAAAGTAATTATTGGTTCCGAGGATTTAAAAGCTAACCATGCAATAAAGCAATATGTTGAC ATTGTTTCTGAAAAGCAGAAATATGATAAATTGGTGAAATTGCTGGAGGACATCATGGATGGCAGCCGAATACTGATATTCATGGATACGAAGAAAGGAT GTGATCAGATCACTAGGCAGCTCCGCATGGATGGATGGCCTGCACTTTCAATTCATGGAGATAAAAGTCAAGCAGAAAGGGATTGGGTGCTCTCAGAATT TAAATCCGGAAAGAGTCCTATTATGACAGCAACAGATGTTGCAGCTCGCGGTTTAGATGTGAAGGATGTGAAGTATGTGGTAAATTATGACTTCCCGGGA TCACCCGAGGACTATGTTCATCGCATTG
• Tissue: pods
• Gene name: LI_gene_184215;
• Additional information: details;

Expression of Ll_transcript_288897

FPKM

• PAB: 0.8
• PNAB: 1.3
• PS1: 2.2
• PS2: 1.1
• PS3: 2.1
• PW1: 1.3
• PW2: 1.4
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288897

• Blastp: DEAD-box ATP-dependent RNA helicase 20 from Oryza sativa with 92.31% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 20 from Oryza sativa with 91.07% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (9268869)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424682.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;