Ll_transcript_288306

• Id Trinity: TRINITY_DN51344_c0_g1_i1
• Name Transcript: Ll_transcript_288306
• Sequence: TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTTTCTCGTTCCTTTACTTTTCAATAATCCAATAAATAACATTATATAGACT TGAAAATAATCACACATACCATCATCATTCATCATCTTCAGAATTCCTTGGCATCAGAGAATTGAGGATATGATGGTGGCTATGATGTATAGAGGGGAGT AGAACTAGGGTTGGTGTTCAAAATGAGAAGGGAGCTAAAAGAGGGATGCCGAGCTTCGATTCTCAGTTACCCATTTCAAATGCACTGTATATTTCCTTTA TGCTGATTTTTTGTTGCAAATGTTGGTTTTGATTCATAGTTTTAGTTATTTATCATGTATTTCTTGCCTATTTAGATTGAGATATTTCTTAGGCCTTTAA TTTCACATTAGGGTTTATAGGATGATTCAAGGAATATGCAGAACACTGATTTTTTTGTTAATTGGGTTTGGGTCTCTAGCGTTTTGAATAAGTAATAGAT GCTAAAGGTTCTATTATACATTCCGGTTTTTTTGAATTTAACTAAATAAACTAGTGATGCTAAAATGGACTTATGCAGTTATGCCCTTCTAATTGGAGCT AAATACCTTTCCTATATCTGTGAATGTGGGTTTGAATTCAAGATTGTAGGGACTATACCTAGAGATAATTTCAGCAAACCGCTTTGCTACTGCATTCACA ATTTTAGCACAGTTGCCCTAGTTTAAAACTATAAACTTTCTGCTTCAGTCAGAAAGGCTGAACCAGACTAACTGTTCCATTTCTAATTCCCTTTATGGGT ATAATAGGTTCATTAGTTGACATGGGTATATTACGTTTCGAAATAGTAAATGTACTGCGAGATGAGTACCACTTATCTATACTTATTTTTATATTTATAA GAAGGTCCAGGATGACCCCTTTCATAAATTTGTAATAGATAGCTTATAAATCTAGATAGAATGAGTTTAATAGAAACAGTCAAACAGTACAGAACTGCTT GATGCATCACATTTTTTTTAAAAACTAATAAATAAATTAGTGCACTATTTAGTAGCTTAAAATAATGATGATATGACAAAAAAAATTATTAACTAAAAGG GCGGCTCAGTGCACAAGGTTCCCACCTGGTGGGATCTAAGAATGGTAGATATGCACAGCCTTACCCTTGCAAAGGAAGGGATCGTTTCCACGATTTGAAC CCATGATCTCCAGGTCACAAGACAAGCAACCTTAGCATTGCGCCGAGGCTCTCCCTCAACTTCTTATTAACTACTTTTCAAATATCCTACCAATGCCTTA TATGCGTTTATAGAGCTTGGAGCATCCATAATCTTCCCTTCTACTAGTAGTCTAGTTTTACCACCAGATGCGTATTTTAACATATTGACTGACTTGTGTT AGCATGGCTTTCAGCTATACAAAGGGGAGCACAATCGATTCTTTTCATATTTCTGACTTTGGAGCATTTGATCAATCATACCGCATAGAGAATACTGTTT ATCTGAGTAGAAGTAAGTACTCCTGTGCACCAACATGGTGAAGTTTACATGTAACAAACATATAATGATATGTTGTATAATTATCAAATCATCTTTACAG AAACATATTTTTTATCTGTCTAAATGATGCTTAATTATCATTTATTCAAAAAAGAGAAATACTAGGGATCTGTGTAATGGTTGCTTTTTGCAAGCTGTCA GTGTGTAGCTACATGGCAAAATTTGCATTAAGAAAAGGAATAATTGCACTCGCACAGACATACCCATTCACTAATGTACACATGATGTTGCTGTTGGCTA AATAGCTGGATATTCATGTCTATCATCTTGCTCATTTTTTTGAACTCTCGCTTACAAGTATAGACTTTTTTCTCCAGCTTTTCAGTCTCTAATTAATACT CGTGATATATGATTCAGATTCAACTATTAATTTACTAAGTAGCGAATCAATTTCACGTGGTCCTGTTGATAAGTTGACAACTTCACTTGATAAAAGCCCA TTGACGAACCAAACAGAGCCTCATAGGTTGCAATTTCAAAAGGAAAAGGTTCAATCATCAAATCCTCTTACTATATTAATTGGTAATACTGAAAACTGGG AAGAGTCTGCCATGGCTGATGCCAGTCCTAGGACTGATATTTCTACAGATGCTGACACCGATGACAAGAATCAGCGGTTTGATAGAAGTCAATCTCTTGC TGGTGTGGCTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGAGTCTCCGCAGGCTTGCTCAGAATCGTGAGGCAGCAAGGAAAAGTCGT CTGAGAAAGAAAGCTTATGTCCAACAGCTGGAAAGTAGTCGTTTGAAGCTGACCCAGCTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAGTCTTCA TATCAAGCTCGGGTGATCAAGCACATTCAATGAGTGGAAATGGGGCAATGCAGTTTGACGCTGAATATGCAAGGTGGCAGGAAGAGCAGAATCGGCAAAT TAATGAGCTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACGGAACTCCGCATGATAATTGATGGTATATTGGCACATTATGATGAGATTTTTAGGCTG AAAGGTATTGCAGCTAAGGCTGATGTTTTCCATTTGTTGTCTGGAATGTGGAAAACACCCGCCGAGAGATGTTTTTTGTGGCTAGGTGGTTTTCGGTCAT CTGAAGTCCTTAAGCTTCTAGTAAATCAATTGGAGCCTCTCACGGAGCAGCAGGTGGCGGGTATCACCAACTTGCAGCAATCATCACAACAAGCAGAAGA TGCATTATCTCAGGGCATGGATGCATTGCAACAGTCCCTTGCTGAGACATTGTCTACCGGATCGCAAAACTCATCCGGTTCATCCGGGAATGTGGCAAAT TACATGGGTCAAATGGCAATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTTATTCGACAGGCTGACAATCTGCGGCAGCAAACTCTACAACAAATGC ACCGTATACTGACAACTCGTCAGTCGGCCCGTGCTCTCCTTGCAATACATGACTATTTTTCACGGCTTCGTGCTCTCAGTTCGCTCTGGCTTGCCCGCCC AAGAGATTGATGTGTGGTAAATGTTTGTTAAAAGTTAATTTAATAGGTCTTTCACCATCAATACTTGATCATTGTAGGTTTTACTTTTAATAAGTTTTAT TGTATTGTATTGTAGTTTTAACAAGTTTTTTTTGTAAAGTAGTATGGTAATAGTGTCCATTGTAATTGTTGCTGAAGGACTTTTGGTTTCAATACAAAAA AATAGGGTTACATATGATAAGTTTTAAGGGTTGGTTCAGCTGACACATTGATTTGTGATTTGAGTTTGGAAGTAAGTACTACAAGATCTCATACATTGAA ACTCGTAGATATGGATCCAAATTCATTAGTATAAAAC
• Tissue: pods
• Gene name: LI_gene_184221;
• Additional information: details;

Expression of Ll_transcript_288306

FPKM

• PAB: 1.7
• PNAB: 1.8
• PS1: 4.2
• PS2: 2.9
• PS3: 4.6
• PW1: 3.3
• PW2: 4
• PW3: 5.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288306

• Blastp: Transcription factor HBP-1b(c1) from Triticum with 79.64% of identity
• Blastx: Transcription factor TGA2.2 from Oryza sativa with 80.56% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0000028)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449314.1)
• Pfam: Basic region leucine zipper (PF07716.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;