| Id Trinity | TRINITY_DN51344_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_288311 |
| Sequence | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTTTCTCGTTCCTTTACTTTTCAATAATCCAATAAATAACATTATATAGACT TGAAAATAATCACACATACCATCATCATTCATCATCTTCAGAATTCCTTGGCATCAGAGAATTGAGGATATGATGGTGGCTATGATGTATAGAGGGGAGT AGAACTAGGGTTGGTGTTCAAAATGAGAAGGGAGCTAAAAGAGGGATGCCGAGCTTCGATTCTCAGTTACCCATTTCAAATGCACTGTATATTTCCTTTA TGCTGATTTTTTGTTGCAAATGTTGGTTTTGATTCATAGTTTTAGTTATTTATCATGTATTTCTTGCCTATTTAGATTGAGATATTTCTTAGGCCTTTAA TTTCACATTAGGGTTTATAGGATGATTCAAGGAATATGCAGAACACTGATTTTTTTGTTAATTGGGTTTGGGTCTCTAGCGTTTTGAATAAGTAATAGAT GCTAAAGGTTCTATTATACATTCCGGTTTTTTTGAATTTAACTAAATAAACTAGTGATGCTAAAATGGACTTATGCAGTTATGCCCTTCTAATTGGAGCT AAATACCTTTCCTATATCTGTGAATGTGGGTTTGAATTCAAGATTGTAGGGACTATACCTAGAGATAATTTCAGCAAACCGCTTTGCTACTGCATTCACA ATTTTAGCACAGTTGCCCTAGTTTAAAACTATAAACTTTCTGCTTCAGTCAGAAAGGCTGAACCAGACTAACTGTTCCATTTCTAATTCCCTTTATGGGT ATAATAGGTTCATTAGTTGACATGGGTATATTACGTTTCGAAATAGTAAATGTACTGCGAGATGAGTACCACTTATCTATACTTATTTTTATATTTATAA GAAGGTCCAGGATGACCCCTTTCATAAATTTGTAATAGATAGCTTATAAATCTAGATAGAATGAGTTTTAATAGAAACAGTCAAACAGTACAGAACTGCT TGATGCATCACATTTTTTTTAAAAACTAATAAATAAATTAGTGCACTATTTAGTAGCTTAAAATAATGATGATATGACAAAAAAAATTATTAACTAAAAG GGCGGCTCAGTGCACAAGGTTCCCACCTGGTGGGATCTAAGAATGGTAGATATGCACAGCCTTACCCTTGCAAAGGAAGGGATCGTTTCCACGATTTGAA CCCATGATCTCCAGGTCACAAGACAAGCAACCTTAGCATTGCGCCGAGGCTCTCCCTCAACTTCTTATTAACTACTTTTCAAATATCCTACCAATGCCTT ATATGCGTTTATAGAGCTTGGAGCATCCATAATCTTCCCTTCTACTAGTAGTCTAGTTTTACCACCAGATGCGTATTTTAACATATTGACTGACTTGTGT TAGCATGGCTTTCAGCTATACAAAGGGGAGCACAATCGATTCTTTTCATATTTCTGACTTTGGAGCATTTGATCAATCATACCGCATAGAGAATACTGTT TATCTGAGTAGAAGTAAGTACTCCTGTGCACCAACATGGTGAAGTTTACATGTAACAAACATATAATGATATGTTGTATAATTATCAAATCATCTTTACA GAAACATATTTTTTATCTGTCTAAATGATGCTTAATTATCATTTATTCAAAAAAGAGAAATACTAGGGATCTGTGTAATGGTTGCTTTTTGCAAGCTGTC AGTGTGTAGCTACATGGCAAAATTTGCATTAAGAAAAGGAATAATTGCACTCGCACAGACATACCCATTCACTAATGTACACATGATGTTGCTGTTGGCT AAATAGCTGGATATTCATGTCTATCATCTTGCTCATTTTTTTGAACTCTCGCTTACAAGTATAGACTTTTTTCTCCAGCTTTTCAGTCTCTAATTAATAC TCGTGATATATGATTCAGATTCAACTATTAATTTACTAAGTAGCGAATCAATTTCACGTGGTCCTGTTGATAAGGTGAGTTTTTAAAGTTATTTTCAACT GACGAGATTCCATATTTGGTAACTAAGGTGAATCTTAGCTTGCTGCTGGCTACAGTATGTCTTATAAGAACTTTTCTCTTTTTCTCTTTAATTTAGTTGA CAACTTCACTTGATAAAAGCCCATTGACGAACCAAACAGAGCCTCATAGGTTGCAATTTCAAAAGGAAAAGGTTCAATCATCAAATCCTCTTACTATATT AATTGGTAATACTGAAAACTGGGAAGAGTCTGCCATGGCTGATGCCAGTCCTAGGACTGATATTTCTACAGATGCTGACACCGATGACAAGAATCAGCGG TTTGATAGAAGTCAATCTCTTGCTGGTGTGGCTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGAGTCTCCGCAGGCTTGCTCAGAATC GTGAGGCAGCAAGGAAAAGTCGTCTGAGAAAGAAAGCTTATGTCCAACAGCTGGAAAGTAGTCGTTTGAAGCTGACCCAGCTAGAGCAAGAGCTTCAGCG AGCTAGGCAGCAGGGAGTCTTCATATCAAGCTCGGGTGATCAAGCACATTCATCGAGTGGAAATGGGGCAATCCAATTTGATGCTGAATATGCAAGATGG CTGGAAGAGCAGAATCGACACATTAATGAACTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACGGAGCTCCGCATGATTATTGATGTTATATTGGCAC ATTGTGATGATATTTTTAGGCTGAAAGGTATTGCAGCTAAGGCTGATGTTTTCCATTTATTATCTGGTATGTGGAAAACACCTGCCGAGAGGTGTTTTTT GTGGCTAGGCGGTTTTCGCTCATCTGAAGTCCTCAAGCTTCTGATAAATCAATTGGAACCTCTCACGGAGCAGCAGGTGGCAGATATCACCAACTTGCAG CAATCATCACAACAAGCAGAAGATGCATTATCTCAGGGCATGGATGCATTGCAACAGTCCCTTGCCGAGACGTTGTCTAGTGGATCACAGAACTCATCGG GTTCATCAGGAAATGTGGCAAATTACATGGGTCAAATGGCAATGGCCATGGGTAAGCTCGGGACACTTGAAGGGTTTGTTCGACAGGTAAAATTTCCTTA GTAACTAGTATGCAATTACTTTGCTACACCTTTTGTGAATAGTTGAAGAATCATTTACTTCAACCTTCAATTTCTAATATATAACTTGAACCTTCACTTA CTAGACTACAGTTGAATTTTCATCTACATGTGTCATGTGCGACCAACTATAAAGCACGGATACTTCAAAATGATTGATTGGTTACTTCTATATATTTTGT TACTTTTCATTTATGTCTATCAATTATTTTAGATTTTTTTCGTATCAATGTATTAGTATTGTGTTGTATCTGAATCCATGCTTCATTGCACCTAGGTTTG ACATCCATAGTGCCTGTTTATTGGTTTTATTTATACCATTTTAGCTTCATTAACCACTTCTGCGAGGATCATTTGCATGCCCGCCCAACAAATTTTGGTT CAATTTAGTTACCATGTCATGTCATTTTATTTACCCCTCCCCGCTTAAAAGGGGACCAAGAAAACTTTCTTGTACACAACATTTCATGTCAATTTGTTTA CTTAAATGTCTTACTGCATTTCTATGATGGTTGTTATGGTAATTAGGCTGACAATCTGCGCCAGCAAACTCTCCAGCAAATGCACCGCATACTAACAACG CGCCAATCGGCTCGTGCTCTCCTTGCAATACATGACTATTTTTCACGGCTACGTGCTCTCAGCTCGCTCTGGCTCGCCCGCCCAAGAGACTGATGAGTGT GGTAAATAGTCGATTAAAAATTAATTTAATTGGTCCTTCACCATTAATGCTTGATCATTTTAGGCTTTTACTGTTAACAAGTTTTCTTGTGTTGTATTGT AGTCTTTTTGTATCACACTGATATTAGTGTTTCACTGAGTCGGTCTAGAAATCAAATTTGTGACAAGCAGGATGATTATATTGTCGATTGTAATTGTCGC TGAAGGGCTTTTTGTTTCATACGGGATATATGATCAATTTTAATGGCTGTTTGTGTTGTCATAGTTTTCTCATTGATCTGAGTTTATAGAACTTGTTAGT TAACAAAATTTGCTGATTTACCATTTTTTCTCTTAATTAGACATTTTATACTTAGCATATGCTTGTTCATTACATCATGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_184221; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_288311
| Blastp | Transcription factor HBP-1b(c1) from Triticum with 77.35% of identity |
|---|---|
| Blastx | Transcription factor HBP-1b(c1) from Triticum with 73.8% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000028) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449314.1) |
| Pfam | Basic region leucine zipper (PF07716.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |