Id Trinity | TRINITY_DN51344_c0_g1_i4 |
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Name Transcript | Ll_transcript_288315 |
Sequence | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTTTCTCGTTCCTTTACTTTTCAATAATCCAATAAATAACATTATATAGACT TGAAAATAATCACACATACCATCATCATTCATCATCTTCAGAATTCCTTGGCATCAGAGAATTGAGGATATGATGGTGGCTATGATGTATAGAGGGGAGT AGAACTAGGGTTGGTGTTCAAAATGAGAAGGGAGCTAAAAGAGGGATGCCGAGCTTCGATTCTCAGTTACCCATTTCAAATGCACTGTATATTTCCTTTA TGCTGATTTTTTGTTGCAAATGTTGGTTTTGATTCATAGTTTTAGTTATTTATCATGTATTTCTTGCCTATTTAGATTGAGATATTTCTTAGGCCTTTAA TTTCACATTAGGGTTTATAGGATGATTCAAGGAATATGCAGAACACTGATTTTTTTGTTAATTGGGTTTGGGTCTCTAGCGTTTTGAATAAGTAATAGAT GCTAAAGGTTCTATTATACATTCCGGTTTTTTTGAATTTAACTAAATAAACTAGTGATGCTAAAATGGACTTATGCAGTTATGCCCTTCTAATTGGAGCT AAATACCTTTCCTATATCTGTGAATGTGGGTTTGAATTCAAGATTGTAGGGACTATACCTAGAGATAATTTCAGCAAACCGCTTTGCTACTGCATTCACA ATTTTAGCACAGTTGCCCTAGTTTAAAACTATAAACTTTCTGCTTCAGTCAGAAAGGCTGAACCAGACTAACTGTTCCATTTCTAATTCCCTTTATGGGT ATAATAGGTTCATTAGTTGACATGGGTATATTACGTTTCGAAATAGTAAATGTACTGCGAGATGAGTACCACTTATCTATACTTATTTTTATATTTATAA GAAGGTCCAGGATGACCCCTTTCATAAATTTGTAATAGATAGCTTATAAATCTAGATAGAATGAGTTTAATAGAAACAGTCAAACAGTACAGAACTGCTT GATGCATCACATTTTTTTTAAAAACTAATAAATAAATTAGTGCACTATTTAGTAGCTTAAAATAATGATGATATGACAAAAAAAATTATTAACTAAAAGG GCGGCTCAGTGCACAAGGTTCCCACCTGGTGGGATCTAAGAATGGTAGATATGCACAGCCTTACCCTTGCAAAGGAAGGGATCGTTTCCACGATTTGAAC CCATGATCTCCAGGTCACAAGACAAGCAACCTTAGCATTGCGCCGAGGCTCTCCCTCAACTTCTTATTAACTACTTTTCAAATATCCTACCAATGCCTTA TATGCGTTTATAGAGCTTGGAGCATCCATAATCTTCCCTTCTACTAGTAGTCTAGTTTTACCACCAGATGCGTATTTTAACATATTGACTGACTTGTGTT AGCATGGCTTTCAGCTATACAAAGGGGAGCACAATCGATTCTTTTCATATTTCTGACTTTGGAGCATTTGATCAATCATACCGCATAGAGAATACTGTTT ATCTGAGTAGAAGTAAGTACTCCTGTGCACCAACATGGTGAAGTTTACATGTAACAAACATATAATGATATGTTGTATAATTATCAAATCATCTTTACAG AAACATATTTTTTATCTGTCTAAATGATGCTTAATTATCATTTATTCAAAAAAGAGAAATACTAGGGATCTGTGTAATGGTTGCTTTTTGCAAGCTGTCA GTGTGTAGCTACATGGCAAAATTTGCATTAAGAAAAGGAATAATTGCACTCGCACAGACATACCCATTCACTAATGTACACATGATGTTGCTGTTGGCTA AATAGCTGGATATTCATGTCTATCATCTTGCTCATTTTTTTGAACTCTCGCTTACAAGTATAGACTTTTTTCTCCAGCTTTTCAGTCTCTAATTAATACT CGTGATATATGATTCAGATTCAACTATTAATTTACTAAGTAGCGAATCAATTTCACGTGGTCCTGTTGATAAGTTGACAACTTCACTTGATAAAAGCCCA TTGACGAACCAAACAGAGCCTCATAGGTTGCAATTTCAAAAGGAAAAGGTTCAATCATCAAATCCTCTTACTATATTAATTGGTAATACTGAAAACTGGG AAGAGTCTGCCATGGCTGATGCCAGTCCTAGGACTGATATTTCTACAGATGCTGACACCGATGACAAGAATCAGCGGTTTGATAGAAGTCAATCTCTTGC TGGTGTGGCTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGAGTCTCCGCAGGCTTGCTCAGAATCGTGAGGCAGCAAGGAAAAGTCGT CTGAGAAAGAAAGCTTATGTCCAACAGCTGGAAAGTAGTCGTTTGAAGCTGACCCAGCTAGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGAGTCTTCA TATCAAGCTCGGGTGATCAAGCACATTCATCGAGTGGAAATGGGGCAATCCAATTTGATGCTGAATATGCAAGATGGCTGGAAGAGCAGAATCGACACAT TAATGAACTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACGGAGCTCCGCATGATTATTGATGTTATATTGGCACATTGTGATGATATTTTTAGGCTG AAAGGTATTGCAGCTAAGGCTGATGTTTTCCATTTATTATCTGGTATGTGGAAAACACCTGCCGAGAGGTGTTTTTTGTGGCTAGGCGGTTTTCGCTCAT CTGAAGTCCTCAAGCTTCTGATAAATCAATTGGAACCTCTCACGGAGCAGCAGGTGGCAGATATCACCAACTTGCAGCAATCATCACAACAAGCAGAAGA TGCATTATCTCAGGGCATGGATGCATTGCAACAGTCCCTTGCCGAGACGTTGTCTAGTGGATCACAGAACTCATCGGGTTCATCAGGAAATGTGGCAAAT TACATGGGTCAAATGGCAATGGCCATGGGTAAGCTCGGGACACTTGAAGGGTTTGTTCGACAGGTAAAATTTCCTTAGTAACTAGTATGCAATTACTTTG CTACACCTTTTGTGAATAGTTGAAGAATCATTTACTTCAACCTTCAATTTCTAATATATAACTTGAACCTTCACTTACTAGACTACAGTTGAATTTTCAT CTACATGTGTCATGTGCGACCAACTATAAAGCACGGATACTTCAAAATGATTGATTGGTTACTTCTATATATTTTGTTACTTTTCATTTATGTCTATCAA TTATTTTAGATTTTTTTCGTATCAATGTATTAGTATTGTGTTGTATCTGAATCCATGCTTCATTGCACCTAGGTTTGACATCCATAGTGCCTGTTTATTG GTTTTATTTATACCATTTTAGCTTCATTAACCACTTCTGCGAGGATCATTTGCATGCCCGCCCAACAAATTTTGGTTCAATTTAGTTACCATGTCATGTC ATTTTATTTACCCCTCCCCGCTTAAAAGGGGACCAAGAAAACTTTCTTGTACACAACATTTCATGTCAATTTGTTTACTTAAATGTCTTACTGCATTTCT ATGATGGTTGTTATGGTAATTAGGCTGACAATCTGCGCCAGCAAACTCTCCAGCAAATGCACCGCATACTAACAACGCGCCAATCGGCTCGTGCTCTCCT TGCAATACATGACTATTTTTCACGGCTACGTGCTCTCAGCTCGCTCTGGCTCGCCCGCCCAAGAGACTGATGAGTGTGGTAAATAGTCGATTAAAAATTA ATTTAATTGGTCCTTCACCATTAATGCTTGATCATTTTAGGCTTTTACTGTTAACAAGTTTTCTTGTGTTGTATTGTAGTCTTTTTGTATCACACTGATA TTAGTGTTTCACTGAGTCGGTCTAGAAATCAAATTTGTGACAAGCAGGATGATTATATTGTCGATTGTAATTGTCGCTGAAGGGCTTTTTGTTTCATACG GGATATATGATCAATTTTAATGGCTGTTTGTGTTGTCATAGTTTTCTCATTGATCTGAGTTTATAGAACTTGTTAGTTAACAAAATTTGCTGATTTACCA TTTTTTCTCTTAATTAGACATTTTATACTTAGCATATGCTTGTTCATTACATCATGG BLAST |
Tissue | pods |
Gene name | LI_gene_184221; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_288315
Blastp | Transcription factor HBP-1b(c1) from Triticum with 77.35% of identity |
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Blastx | Transcription factor HBP-1b(c1) from Triticum with 73.8% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000028) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449314.1) |
Pfam | Basic region leucine zipper (PF07716.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |