Ll_transcript_288350

• Id Trinity: TRINITY_DN51348_c1_g1_i1
• Name Transcript: Ll_transcript_288350
• Sequence: CACAAGTTCAAAGAAAAACAACATAAACACAATAACCTCTTTTTCTGAACTCCTCACAACATCATCACATTTTTATTTCGAACATTTTTTGTCTCTGCTT CTGTTCTCAGTTCTGACACCAAACAACATTTTTGAGTTTCAAGTTCCATACTTTACACATATGAAAAGAGCAAGAGATGATATTTTTTCTGGCTCTCAAT TCAAACGCCCCTTTGGTTCCTCACGTGCTGATTTCTATGGCCAAAATCAAATCCCTGGAGGAGGAGGAGTAGGTGGAGGTGGTGGCAGTGGGACAGGAGG CGGAGGAGCAACTACATCACAGAAACTGACTACCAATGACGCCTTATCCTATTTGAAGGAAGTGAAAGACATGTTTCATGACCAAAGAGACAAATATGAC TTGTTCCTTGAGGTTATGAAAGATTTCAAGGCTCAAAGGATTGACACTGCTGGTGTCATAGCAAGAGTTAAGGAGCTATTCAAAGGGCACAATAATTTGA TTTTTGGATTTAATACTTTCTTGCCAAAGGGGTATGAGATAACACTTGATGAGGATGATGCTCCTCCAAAGAAAACGGTTGAATTTGAAGAAGCTATTAG TTTTGTGAACAAGATAAAGAAACGATTCCAAAATGATGAGCTTGTTTACAAATCATTCTTGGACATTTTGAATATGTACCGCAAAGAGCATAAGGACATT GGGGAGGTTTATAGTGAGGTTGCTACCCTTTTTAAGGACCACCGGGATTTACTCGACGAGTTTACTAGATTTTTACCAGATACTTCTGGAACACATTCTG CACACCATGGTCCATTTGGTCGAAATTCGATGCAGCGCTTTAATGAGCGGAGTTCTTCAGCATCCATGATGCGGCCAATGCAGCAGCGATATCGACGAGA CAGGCTACTTGGTTCTCATGATCGTGATCTGAGTATTGATCACACTGATCTTGATGATGACAAAACAATGATCATGCACAAGGAACAGAGGAAACGCGAG AGCCGGGATAGGAGAATTCGTGACCATGATGAGAGAGAAGCTGATCTTGATAACAACAGGGATCTGAACTCGCAACGCTTTCCTGACAAAAAGAAATCCT TCAGAAAGGCTGAAGGTTTTGGCATGTATAGTCAAGCATTCAGTTTCTGTGAGAAAGTTAAGGAGAAGTTGAGTAGTGCAGATGACTACCAAGCATTCTT GAAGTGCCTTCACATTTTCAGCAATGGAATAATAAAAAGGAATGATTTGCAAAATTTGGTAACCGATTTACTTGGAAAGCATTCTGATCTTATGGATGAA TTCAATGATTTCTTGGAGCGTTGCGAAAATATTGATGGATTCCTCGCTGGTGTCATGAGTAAAAAGTCATTGTCTACTGATGCTCATGCATCAAGATCAT CAAAGTTGGAG
• Tissue: pods
• Gene name: LI_gene_184255;
• Additional information: details;

Expression of Ll_transcript_288350

FPKM

• PAB: 0.2
• PNAB: 0.8
• PS1: 3
• PS2: 1.7
• PS3: 3.3
• PW1: 0.6
• PW2: 1.6
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288350

• Blastp: Paired amphipathic helix protein Sin3-like 2 from Arabidopsis with 61.4% of identity
• Blastx: Paired amphipathic helix protein Sin3-like 2 from Arabidopsis with 59.38% of identity
• Eggnog: Paired AMPhipathic helix protein(COG5602)
• Kegg: Link to kegg annotations (AT5G15020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452919.1)
• Pfam: Paired amphipathic helix repeat (PF02671.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;