Ll_transcript_288351

• Id Trinity: TRINITY_DN51348_c1_g1_i2
• Name Transcript: Ll_transcript_288351
• Sequence: CACAAGTTCAAAGAAAAACAACATAAACACAATAACCTCTTTTTCTGAACTCCTCACAACATCATCACATTTTTATTTCGAACATTTTTTGTCTCTGCTT CTGTTCTCAGTTCTGACACCAAACAACATTTTTGAGTTTCAAGTTCCATACTTTACACATATGAAAAGAGCAAGAGATGATATTTTTTCTGGCTCTCAAT TCAAACGCCCCTTTGGTTCCTCACGTGCTGATTTCTATGGCCAAAATCAAATCCCTGGAGGAGGAGGAGTAGGTGGAGGTGGTGGCAGTGGGACAGGAGG CGGAGGAGCAACTACATCACAGAAACTGACTACCAATGACGCCTTATCCTATTTGAAGGAAGTGAAAGACATGTTTCATGACCAAAGAGACAAATATGAC TTGTTCCTTGAGGTTATGAAAGATTTCAAGGCTCAAAGGATTGACACTGCTGGTGTCATAGCAAGAGTTAAGGAGCTATTCAAAGGGCACAATAATTTGA TTTTTGGATTTAATACTTTCTTGCCAAAGGGGTATGAGATAACACTTGATGAGGATGATGCTCCTCCAAAGAAAACGGTTGAATTTGAAGAAGCTATTAG TTTTGTGAACAAGATAAAGAAACGATTCCAAAATGATGAGCTTGTTTACAAATCATTCTTGGACATTTTGAATATGTACCGCAAAGAGCATAAGGACATT GGGGAGGTTTATAGTGAGGTTGCTACCCTTTTTAAGGACCACCGGGATTTACTCGACGAGTTTACTAGATTTTTACCAGATACTTCTGGAACACATTCTG CACACCATGGTCCATTTGGTCGAAATTCGATGCAGCGCTTTAATGAGCGGAGTTCTTCAGCATCCATGATGCGGCCAATGCAGCAGCGATATCGACGAGA CAGGCTACTTGGTTCTCATGATCGTGATCTGAGTATTGATCACACTGATCTTGATGATGACAAAACAATGATCATGCACAAGGAACAGAGGAAACGCGAG AGCCGGGATAGGAGAATTCGTGACCATGATGAGAGAGAAGCTGATCTTGATAACAACAGGGATCTGAACTCGCAACGCTTTCCTGACAAAAAGAAATCCT TCAGAAAGGCTGAAGGTTTTGGTATGGCTACTGACTTTGCCTCTTATGATGACAAAGATACCTTAAAGAGTAAGTCCATCATATGCTTTGGACAAAATCA CATTGCTTGGACATGTTTCTTGCATTTTAGATACAGTTCTTTTGGTTGCTGATAAGTTATTGTGTTTTGCTTGAATTGTAAAAGTATTGAAACTAAACAC AAAAGTAAATGAGAGAGAATTGAAAAGTGTTCCTTTATTGAATGAATTAATTGATTACAATGTAGAAGGCTTATCTCTTTATATAAGATGGGAAAACTTA CAAAGGAAGGAACTATAGGAGGTGACGTGAACGGCAAGTCACCTCCTTTAACTAATTGAAACAGTAACTGTTATAAGCAGTTAACTGAAAAGCTAACTAT TGAGACAACTGTCACAGCATTTGGTAAGTAACCTAACTAGACTAACTAAGCTAGACTTTAGGTCTTATTCTCTAATGTCAATATACAGTTTTCTATGTCA GAAATTAGTTTTCATTATCAGCTGTTGTGCAGAAAACATAACCAAAGAAAAGTAAGAAAAGAAGAGGAAAGGGAGTAGTAATTATTTTTCTCGGCGTTAA ACACACCAAATGAAAATTATGAAGATATTAAATGTAGCTTTTCATATTTCATATACTGTCATCTCTGTCCTCATTCTTGTTTTGCGTTTTGAGAAATAGA TAGATCATTGATCTTATTAACAAGACCAATAAGTGTTGAATGTTTGCAATCTGTTGAGGTGAAAAAATCATATGCGTAATTAAATGTAGTGATAACTGGC TGTATGGAGTTTCGGTAGTTCTATTATTTGCATTTCTTTGGCCCTTTATTATGTTTCTTGATAAAAAAAAATCATTTTAAAATAATGGTAAGAAAGAATA GGACCACGAATCCACGATCATCACATTTACCTTACCTGTATAGTTTTCTAACTTGTCGAATCTTGTAATTTTTGTCTTCATACCACCAGGCATGTATAGT CAAGCATTCAGTTTCTGTGAGAAAGTTAAGGAGAAGTTGAGTAGTGCAGATGACTACCAAGCATTCTTGAAGTGCCTTCACATTTTCAGCAATGGAATAA TAAAAAGGAATGATTTGCAAAATTTGGTAACCGATTTACTTGGAAAGCATTCTGATCTTATGGATGAATTCAATGATTTCTTGGAGCGTTGCGAAAATAT TGATGGATTCCTCGCTGGTGTCATGAGTAAAAAGTCATTGTCTACTGATGCTCATGCATCAAGATCATCAAAGTTGGAG
• Tissue: pods
• Gene name: LI_gene_184255;
• Additional information: details;

Expression of Ll_transcript_288351

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0
• PS2: 0.3
• PS3: 0.2
• PW1: 0.1
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288351

• Blastp: Paired amphipathic helix protein Sin3-like 2 from Arabidopsis with 59.42% of identity
• Blastx: Paired amphipathic helix protein Sin3-like 2 from Arabidopsis with 57.14% of identity
• Eggnog: Paired AMPhipathic helix protein(COG5602)
• Kegg: Link to kegg annotations (AT5G15020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452916.1)
• Pfam: Paired amphipathic helix repeat (PF02671.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;