Ll_transcript_288353

Id TrinityTRINITY_DN51348_c1_g1_i3
Name TranscriptLl_transcript_288353
SequenceCCGCTTCTTCTTCTCTCTCTTCAAACAATTTCTCTTCTTTTTTCATTCTTACGTAACAACGTAAGAGTGAGACACAAACTTAGGAAACTAAACCTATTTT CATGTTTTTTTTATCAAACACAAAACCCTTCACTGTTTCTTTGTTATATATGAAAAGGGTAAGGGATGATGTTTATTCTGGCCCTCAATTCAAACGCCCC TTTGGTTCATCACGTGCTGCTGATTCCTATGGCCAAAATCAAATCCCTAGTGGTGGAGGAGGAGCAGGCGGTGGGGGTGGAGGAGGCGGAGGAGCAACCA CATCGCAGAAACTGACTACCAATGATGCCTTATCCTATTTGAAGGAAGTGAAAGACATGTTTCAAGACCAAAGAGAAAAATATGATTTGTTCCTTGAGGT TATGAAAGATTTCAAGGCTCAAAGGATTGACACTGCTGGTGTCATAGCAAGAGTGAAGGAGCTATTCAAAGGGCATAATAATTTGATTTTTGGATTTAAT ACTTTCTTGCCGAAGGGTTATGAGATAACACTTGATGAAGGTGATGCTCCTCAAAAGAAAACAGTTGAATTTGAAGAAGCTATTACTTTTGTGAACAGGA TAAAGAAACGATTCCAAAATGACGACCATGTTTACAAGTCTTTCTTGGACATATTGAATATGTACCGCAAAGAGCACAAGGACATTGGCGAGGTTTACAG TGAGGTTGCAACCCTTTTCAAGGACCATCGAGATTTACTCGACGAGTTCACTAGATTCTTACCAGATACTTCTGGAACACATTCTATGCCGCATGCTCCA TTTGCTCGAAGTTCATTGCAGCGCTTTAGTGAGCGAAGTTCTTCAGCACCCATGATGCGGCCAATTCAAGTAGACAAGCAACGTTATCGACGAGATAGGA TTCTTCCTTCGCATGATCGCGATTTGAGTGTTGATCACACTGATCTTGATGATGACAAAACTATGATCATGAACAAGGAACAGAGGAAACGCGAGAGCAG GGATAGGAGAATTCGTGATCATGATGAGAGAGAAGCTGATCTTGATAACAACAGGGATTTGAACTCTCAACGCTTTCCTGATAAAAGGAAATCTGTCAAA AAGGCTGATGGTTTTGGATTGACTTCTGACTTTGCTTCTCATGAGGACAAAGATTCCTTAAAGAGCATGTATAGTCAAGCATTCAGTTTCTGTGAAAAAG TTAAGGAGAAGTTGAGCAGTGCAGATGACTACCAAGCATTCTTGAAGTGCCTTCACATTTTCAGCAATGGAATAATAAAAAGGACTGATTTGCAAAATTT GGTAACTGATTTACTTGGAAAACATTCGGACCTTATGGATGAATTCAATGATTTCCTGGAGCGTTGTGAGAATATTGATGGATTCCTTGCCGGTGTCATG AGTAAAAAGTCATTGTCTACCGATGCTCATGCGTCAAGATCATCAAAGTTGGAGGACAAAGACAAAGAGAAGAAGCGTGATATGGATGGAGGTAAAGAGA AGGAAAGATACAAGGACAACAAATACATGGACAAATCCATTCAAGAGCTCGACCTTAATGATTGTGAATGTTGTTCTCCCAGCTACCGGCGTCTGCCAGC AGATTATCCATTTCCTACGGTCAGTCATAGATCTGAGCTTGCTGCTGAAGTGTTGAATGATGATTGGGTATCTGTGACATCAGGAAGTGAAGATTACTCT TTCAAGCATATGCGCAGGAATCAGTATGAAGAAAACTTGTTCAGATGTGAAGATGACAGATTTGAGCTGGACATGCTATTAGAGTCTGTCAGTTCAGCTG CTAAACGTGCAGAGGAATTGTATAATAACATTGCTGAAAATAAGATCAATATGGAGAGTCTGGGCCGTGTTGAAGATCATTTTACCGCACTAAATGTAAG GTGCATTGAACGTCTATATGGTGACCATGGTCTTGATGTTGTAGACATTTTGCGTAAAAATCCAACTCATTCCCTGCCTGTCATAATTACCCGACTGAAG CAGAAACAAGAGGAGTGGACTAGGTGTCGTTCAGATTTTAATAAGGTCTGGGCTGAAATTTATGCTAAAAATCACTACAAATCACTTGATCACCGTAGCT TCTACTTCAAGCAACAAGATTCAAAGAACTTGAGCACAAAATCTTTGGTGGCTGAGATTAAAGAAATTAAAGAGAAGCAGCAAGAGGAGGATGATATTCT TCAGTCGATTTCTGCTGGAAATAAACAGCCTCTAATTCCACATCTCGAATTTGAATATTCTGATGCTGGGATTCATGAAGACCTGTATAAACTTGTTCGA TACTCGTGTGAGGAGGTCTTCTCTAGTAAGGAGTTGTTAAGTAAAATTATGAGACTTTGGGATACCTTCTTGGAGCCAATGCTCGGTGTTCCTTCCCAGT CTTGTAGGACAGAAAGGGTCGAGGACAGGAAAGAAAGCCACAATGCCTGTGATGGAAGTCCTCACAGAGACTCGGTTTCAATAAACTCAAGGTTACCGAA ATTGAATAAGAATGAGGCTGATGGTAGGGTAACGGAAGTGAAGAATGCTCATCGGACAAGTTTAGTAGCTAATGGTAAAGAAAATGTATCTGTCGGTGGT GAACTGGTTTGTAGAGACGATCCAATGATGGATAAAGGGCAGAAAAGTGTAGACTGCAGTGTGAAAGTGTCTGGATTTAGTAAACCATTTGCCTCTGATG AACAAGTTTCTAAAAATAATGCATCAATTGCAGTTAGAGAAGAAAATAGCCTGAGCAGAACCAATGCAGAATTGAATGCAGGCTGTGTTACTACTCCATC ACGGGCTACTGATACCGACGACTCTGTGGCCAAGTGTCAGAGTGCTAATGCTCCATTGGTGGAGGGATGTGACACTACAGCTCCGGTTCCAGTAGTGAAT GGGGTGCTAACTGAGAGCAGTAAAGTTAAAAGCCATGAAGAATCTGCTGGGCCTAGCAAAATTGAAAAGGAAGAGGGTGAATTATCACCAAATGGTGATT CCGAGGAAGATAACTTTGTTGGTTATGAAAATTCAAATGCACAGTCAATGGTCAAGTCAAAGCACAATATCGAAATAAGGAAATATCATTCTAGAAATGG AGAGGACGAGAGCTGTCCTGATGGTGTAGGTGATAATGACGCAGATACTGATGACGAGGACAGTGACGATGTTTCTGCAGTTGGTGAAGATGCCTCAGGC AGTGATTCTGCTGGTGATGAAGGCTCCCGTGAAGATCACGAGGAGGAGGAAGATATGGAACACGATGATGTTGATGCTAAGGCTGAGAGTGAAGGCGAAG CTGATGGAGATGCACATTCTGTTGGAGATGGTTTGTCATTACCATTGTCCGAGAGGTTCCTTTCGTCAGTGAAACCCCTCACAAAGCATATATCAGCAGT TTCATTTGTTGAAGAAATGAAGGATTCCAGGGTGTTTTATGGAAATGACAATTTTTATGCGCTTTTTAGGCTCCATCAAATTCTTTATGAAAGGATCTTA TCAGCAAAAACAAATTCAATGAGTGCAGAAACGAAATGGAAAACGAAGGATGCTAGTTCCGCAGATCCTTACTCAAGATTTATGAATGCGTTGTACAACT TGCTTGATGGATCTTCTGAGAATGCAAAGTTTGAAGATGAGTGCCGAGCGGTTATTGGGAATCAGTCGTATGTGTTATTCACATTGGACAAGTTAATATA TAAGTTGGTCAGACAGCTTCAAACTGTCGCAACCGATGAGGTAGACAGTAAACTTCTCCAATTGTACGAGTATGAGAAGTCTCGGAAACCTGGGAAACTA AATGATTCAGTCTATCATGCAAATGCACATGTCATCCTTAATGAGGAGAATATATATCGATTGCAATGTTCTTCTACTCCTTCTCGACTTTCCATCCAGA TCATGGACAATATGAATGAAAAGCCTGAGATGTTTGCTGTATCTATTGATCCGGATTTTTCCTCTTATCTGCAAAGCGATTTTCTGTCTGCCTCTCCTTG CAAAAAGGAACCAAATGGCGTTATACTGCGAAGAGCTGGAACAGAAGACGAGGAAACAGAAGCATAATGTGGAGAAAACGGATGAAAACTCAAGAAATTA TAGATCGGGTGAGGATTTCTAGTAGATTGAGTACCTTTCTGAAGTGCAACTATAAGTTGCTTCTGTTTGATTACTTCTCTCCATGTCTGTCATAGGCCAT TATATCAGCTAGGCATTATAAATGTCTTCCTTCATTGGGGCCCTTGAAGAAGAAATATATTTGGAGCAACCTCTGGTTTTGTTGCTCGAGTGGAGTCCGT GTTTATTTGCAAGCTACGGAGATGCTGAAATAGTCACTTAGGTCATCCCTTTTTTGTCAAAGTTTCAGACAATGGTTTCTAGTTTCACAATGTTAGTCTT TAAATTGTAAGTCGTGTCAACTCGGGGCGCATTTTCATGCTTACCGAGTCAGGAAAACAGTCCAATTGGGTCTTCTCCATTTTCTGTTATTCATAGTAAT ATATAGGGTCCAAGTATATCTATATCTTCAGGTAAGTATTTTGTTATTACCTTTATTGATGAATTCTTTTCATTGTACTTAGCGATTTTTAATGAAAAGA TCCGAGTTAATTTTTGTATTCATCTTTTATAATGAGATTCTAATTGACAAATTAAAATAATGTGCTTGATAATGCATAAATGATATTGCACTTTTCTACT TCTATTTTATCTATTTCATTATTTTACACCATTCAACAAGTCCGTACTCTCGATTTAATCGAGTGGCAGATAAAAACAATCACCATCTCATTTATTGTAC TCTTGCTACATTTAGACATGCATTTTCATATTTGGCTGATGCTGTCGTAATTGTTAGTTATTCGATTGATCACTTTTCGTCATCAGTTCTTTAGAATTGC AGTCTGTTGATTACCTTCATATTGCGCTGATAACAGCATCAGGAGACAGTACAGAGATCTGTTTGAAAACAGATCTTAGGGAAAATCTATAGCAGCTTAT GTTTATATACATTCATCGAAAATTTACATTACTTGATAATAACAATTCGTTTATAATAAATCAAATAAGTAAATAAAAAGGAAACAACTCAAAAAACAGT TCTTTAATTTATATCTGCAACATAAAATAATCAGTATGATGTACAATAACCTCAACGAGGCGATGCGTAAGTTGCTGCCTTTTTTTGACATGCAGAAACA AACACAAATATCGAGGCTTAGATGAGCTCTCTGCAATTTCTTCTGCCATGGATGGCGTTAAAGTGATTAACGGATTGGAATGCAAGATAGCCTGCAACTC ATCTAAGATTTCCTATGTTCTCGACACACAAGATTTTTTCTTCCGCCCCAGAAGGAAAAGAGGAACATCACGGACCGCGTCCACGTCTACTACCCGACAT TCTCGGGAGGAAAGATTTCGCAAATTGTTGGCATAACCTTAATGCTTTGTATACCCATTGCAACAGAAACCCTTTAGATACAACAAGAAATTCATGTTAA AGCAGTTTAAGACACTCAAATCCATACTTTTTATGTCTAAAGGAGTCTCGGTGCAACAACCTAGGAATCCTTTGGTTGTTAATTTTATTGTCATGATGCA AACATGAAGGTTAGGAGGGGAATGCAAATTGGTGCCTCTTCTATGTAAATAGTTTCCTGCATAATATATTAGTAGAAATTTGTACCAATTTGATCTTGCT CTTAATTAAAGGTGCAATTATATGGAATTAGATTCATATTGTTTTTTTTTTTTTTCATTGTTCCTATATAATACTTGTCTTGTTGGATTGGTGACCCTAA AATAGATCACCAATGGATTAATGAACACATGAGGTGCAATGGAAAAGCTTTTCCAATGTAAAA BLAST
Tissuepods
Gene nameLI_gene_184255; 
Additional informationdetails; 

Expression of Ll_transcript_288353

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_288353
BlastpPaired amphipathic helix protein Sin3-like 2 from Arabidopsis with 58.18% of identity
BlastxPaired amphipathic helix protein Sin3-like 2 from Arabidopsis with 56.81% of identity
EggnogPaired AMPhipathic helix protein(COG5602)
KeggLink to kegg annotations (AT5G15020)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019442614.1)
PfamPaired amphipathic helix repeat (PF02671.20)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;