Ll_transcript_288356

Id TrinityTRINITY_DN51348_c1_g1_i5
Name TranscriptLl_transcript_288356
SequenceCAGCCCACACCTTAAAAAACAAAGCATATAAGCATAAGCTCACACAAAAACCTCTTTTCATAATCATCACTTTTTTTCTTCTCATTCCAAACAACAAAAT TTTGAGTTTAAGTTCCACACTTTGCACATATGAAAAGGGTAAGGGATGATGTTTATTCTGGCCCTCAATTCAAACGCCCCTTTGGTTCATCACGTGCTGC TGATTCCTATGGCCAAAATCAAATCCCTAGTGGTGGAGGAGGAGCAGGCGGTGGGGGTGGAGGAGGCGGAGGAGCAACCACATCGCAGAAACTGACTACC AATGATGCCTTATCCTATTTGAAGGAAGTGAAAGACATGTTTCAAGACCAAAGAGAAAAATATGATTTGTTCCTTGAGGTTATGAAAGATTTCAAGGCTC AAAGGATTGACACTGCTGGTGTCATAGCAAGAGTGAAGGAGCTATTCAAAGGGCATAATAATTTGATTTTTGGATTTAATACTTTCTTGCCGAAGGGTTA TGAGATAACACTTGATGAAGGTGATGCTCCTCAAAAGAAAACAGTTGAATTTGAAGAAGCTATTACTTTTGTGAACAGGATAAAGAAACGATTCCAAAAT GACGACCATGTTTACAAGTCTTTCTTGGACATATTGAATATGTACCGCAAAGAGCACAAGGACATTGGCGAGGTTTACAGTGAGGTTGCAACCCTTTTCA AGGACCATCGAGATTTACTCGACGAGTTCACTAGATTCTTACCAGATACTTCTGGAACACATTCTATGCCGCATGCTCCATTTGCTCGAAGTTCATTGCA GCGCTTTAGTGAGCGAAGTTCTTCAGCACCCATGATGCGGCCAATTCAAGTAGACAAGCAACGTTATCGACGAGATAGGATTCTTCCTTCGCATGATCGC GATTTGAGTGTTGATCACACTGATCTTGATGATGACAAAACTATGATCATGAACAAGGAACAGAGGAAACGCGAGAGCAGGGATAGGAGAATTCGTGATC ATGATGAGAGAGAAGCTGATCTTGATAACAACAGGGATTTGAACTCTCAACGCTTTCCTGATAAAAGGAAATCTGTCAAAAAGGCTGATGGTTTTGGATT GACTTCTGACTTTGCTTCTCATGAGGACAAAGATTCCTTAAAGAGCATGTATAGTCAAGCATTCAGTTTCTGTGAAAAAGTTAAGGAGAAGTTGAGCAGT GCAGATGACTACCAAGCATTCTTGAAGTGCCTTCACATTTTCAGCAATGGAATAATAAAAAGGACTGATTTGCAAAATTTGGTAACTGATTTACTTGGAA AACATTCGGACCTTATGGATGAATTCAATGATTTCCTGGAGCGTTGTGAGAATATTGATGGATTCCTTGCCGGTGTCATGAGTAAAAAGTCATTGTCTAC CGATGCTCATGCGTCAAGATCATCAAAGTTGGAGGACAAAGACAAAGAGAAGAAGCGTGATATGGATGGAGGTAAAGAGAAGGAAAGATACAAGGACAAC AAATACATGGACAAATCCATTCAAGAGCTCGACCTTAATGATTGTGAATGTTGTTCTCCCAGCTACCGGCGTCTGCCAGCAGATTATCCATTTCCTACGG TCAGTCATAGATCTGAGCTTGCTGCTGAAGTGTTGAATGATGATTGGGTATCTGTGACATCAGGAAGTGAAGATTACTCTTTCAAGCATATGCGCAGGAA TCAGTATGAAGAAAACTTGTTCAGATGTGAAGATGACAGATTTGAGCTGGACATGCTATTAGAGTCTGTCAGTTCAGCTGCTAAACGTGCAGAGGAATTG TATAATAACATTGCTGAAAATAAGATCAATATGGAGAGTCTGGGCCGTGTTGAAGATCATTTTACCGCACTAAATGTAAGGTGCATTGAACGTCTATATG GTGACCATGGTCTTGATGTTGTAGACATTTTGCGTAAAAATCCAACTCATTCCCTGCCTGTCATAATTACCCGACTGAAGCAGAAACAAGAGGAGTGGAC TAGGTGTCGTTCAGATTTTAATAAGGTCTGGGCTGAAATTTATGCTAAAAATCACTACAAATCACTTGATCACCGTAGCTTCTACTTCAAGCAACAAGAT TCAAAGAACTTGAGCACAAAATCTTTGGTGGCTGAGATTAAAGAAATTAAAGAGAAGCAGCAAGAGGAGGATGATATTCTTCAGTCGATTTCTGCTGGAA ATAAACAGCCTCTAATTCCACATCTCGAATTTGAATATTCTGATGCTGGGATTCATGAAGACCTGTATAAACTTGTTCGATACTCGTGTGAGGAGGTCTT CTCTAGTAAGGAGTTGTTAAGTAAAATTATGAGACTTTGGGATACCTTCTTGGAGCCAATGCTCGGTGTTCCTTCCCAGTCTTGTAGGACAGAAAGGGTC GAGGACAGGAAAGAAAGCCACAATGCCTGTGATGGAAGTCCTCACAGAGACTCGGTTTCAATAAACTCAAGGTTACCGAAATTGAATAAGAATGAGGCTG ATGGTAGGGTAACGGAAGTGAAGAATGCTCATCGGACAAGTTTAGTAGCTAATGGTAAAGAAAATGTATCTGTCGGTGGTGAACTGGTTTGTAGAGACGA TCCAATGATGGATAAAGGGCAGAAAAGTGTAGACTGCAGTGTGAAAGTGTCTGGATTTAGTAAACCATTTGCCTCTGATGAACAAGTTTCTAAAAATAAT GCATCAATTGCAGTTAGAGAAGAAAATAGCCTGAGCAGAACCAATGCAGAATTGAATGCAGGCTGTGTTACTACTCCATCACGGGCTACTGATACCGACG ACTCTGTGGCCAAGTGTCAGAGTGCTAATGCTCCATTGGTGGAGGGATGTGACACTACAGCTCCGGTTCCAGTAGTGAATGGGGTGCTAACTGAGAGCAG TAAAGTTAAAAGCCATGAAGAATCTGCTGGGCCTAGCAAAATTGAAAAGGAAGAGGGTGAATTATCACCAAATGGTGATTCCGAGGAAGATAACTTTGTT GGTTATGAAAATTCAAATGCACAGTCAATGGTCAAGTCAAAGCACAATATCGAAATAAGGAAATATCATTCTAGAAATGGAGAGGACGAGAGCTGTCCTG ATGGTGTAGGTGATAATGACGCAGATACTGATGACGAGGACAGTGACGATGTTTCTGCAGTTGGTGAAGATGCCTCAGGCAGTGATTCTGCTGGTGATGA AGGCTCCCGTGAAGATCACGAGGAGGAGGAAGATATGGAACACGATGATGTTGATGCTAAGGCTGAGAGTGAAGGCGAAGCTGATGGAGATGCACATTCT GTTGGAGATGGTTTGTCATTACCATTGTCCGAGAGGTTCCTTTCGTCAGTGAAACCCCTCACAAAGCATATATCAGCAGTTTCATTTGTTGAAGAAATGA AGGATTCCAGGGTGTTTTATGGAAATGACAATTTTTATGCGCTTTTTAGGCTCCATCAAATTCTTTATGAAAGGATCTTATCAGCAAAAACAAATTCAAT GAGTGCAGAAACGAAATGGAAAACGAAGGATGCTAGTTCCGCAGATCCTTACTCAAGATTTATGAATGCGTTGTACAACTTGCTTGATGGATCTTCTGAG AATGCAAAGTTTGAAGATGAGTGCCGAGCGGTTATTGGGAATCAGTCGTATGTGTTATTCACATTGGACAAGTTAATATATAAGTTGGTCAGACAGCTTC AAACTGTCGCAACCGATGAGGTAGACAGTAAACTTCTCCAATTGTACGAGTATGAGAAGTCTCGGAAACCTGGGAAACTAAATGATTCAGTCTATCATGC AAATGCACATGTCATCCTTAATGAGGAGAATATATATCGATTGCAATGTTCTTCTACTCCTTCTCGACTTTCCATCCAGATCATGGACAATATGAATGAA AAGCCTGAGATGTTTGCTGTATCTATTGATCCGGATTTTTCCTCTTATCTGCAAAGCGATTTTCTGTCTGCCTCTCCTTGCAAAAAGGAACCAAATGGCG TTATACTGCGAAGGTACAAATCTGCAAGATTAAACTTATAAGTTTCATTTTGGTACATTTCTCTTGATGAGTAAAAAGGGGTGGGGGTTAATTCTTCTGA AAATGATTAACTTCAATGATCATTGTATTCCTTTTTTCTATTACATTTTTTTCTCCAAGTAACTTGTTAATTCTATATTTTCTAATTGGGACTTTAACTT ACTGCGTGTGAGATTTTATTGCATACTTTAGCTAGTATATTGTCGATCACTTTCAATTAAGATGACTTGAAGATAAACCGGAGAACATTTTGTGTGAATT TTGCTTTAGGGTATCCTTTAACAACTTATATTTATATACATTAGTTAAAGATTTACTTCACTTAATAAGAAGGAAACAATTTATAAAACAGAGCTGGAAC AGAAGACGAGGAAACAGAAGCATAATGTGGAGAAAACGGATGAAAACTCAAGAAATTATAGATCGGGCCATTATATCAGCTAGGCATTATAAATGTCTTC CTTCATTGGGGCCCTTGAAGAAGAAATATATTTGGAGCAACCTCTGGTTTTGTTGCTCGAGT BLAST
Tissuepods
Gene nameLI_gene_184255; 
Additional informationdetails; 

Expression of Ll_transcript_288356

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_288356
BlastpPaired amphipathic helix protein Sin3-like 2 from Arabidopsis with 58.18% of identity
BlastxPaired amphipathic helix protein Sin3-like 2 from Arabidopsis with 56.86% of identity
EggnogPaired AMPhipathic helix protein(COG5602)
KeggLink to kegg annotations (AT5G15020)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019442610.1)
PfamPaired amphipathic helix repeat (PF02671.20)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;