| Id Trinity | TRINITY_DN51348_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_288358 |
| Sequence | CACAAGTTCAAAGAAAAACAACATAAACACAATAACCTCTTTTTCTGAACTCCTCACAACATCATCACATTTTTATTTCGAACATTTTTTGTCTCTGCTT CTGTTCTCAGTTCTGACACCAAACAACATTTTTGAGTTTCAAGTTCCATACTTTACACATATGAAAAGAGCAAGAGATGATATTTTTTCTGGCTCTCAAT TCAAACGCCCCTTTGGTTCCTCACGTGCTGATTTCTATGGCCAAAATCAAATCCCTGGAGGAGGAGGAGTAGGTGGAGGTGGTGGCAGTGGGACAGGAGG CGGAGGAGCAACTACATCACAGAAACTGACTACCAATGACGCCTTATCCTATTTGAAGGAAGTGAAAGACATGTTTCATGACCAAAGAGACAAATATGAC TTGTTCCTTGAGGTTATGAAAGATTTCAAGGCTCAAAGGATTGACACTGCTGGTGTCATAGCAAGAGTTAAGGAGCTATTCAAAGGGCACAATAATTTGA TTTTTGGATTTAATACTTTCTTGCCAAAGGGGTATGAGATAACACTTGATGAGGATGATGCTCCTCCAAAGAAAACGGTTGAATTTGAAGAAGCTATTAG TTTTGTGAACAAGATAAAGAAACGATTCCAAAATGATGAGCTTGTTTACAAATCATTCTTGGACATTTTGAATATGTACCGCAAAGAGCATAAGGACATT GGGGAGGTTTATAGTGAGGTTGCTACCCTTTTTAAGGACCACCGGGATTTACTCGACGAGTTTACTAGATTTTTACCAGATACTTCTGGAACACATTCTG CACACCATGGTCCATTTGGTCGAAATTCGATGCAGCGCTTTAATGAGCGGAGTTCTTCAGCATCCATGATGCGGCCAATGCAGCAGCGATATCGACGAGA CAGGCTACTTGGTTCTCATGATCGTGATCTGAGTATTGATCACACTGATCTTGATGATGACAAAACAATGATCATGCACAAGGAACAGAGGAAACGCGAG AGCCGGGATAGGAGAATTCGTGACCATGATGAGAGAGAAGCTGATCTTGATAACAACAGGGATCTGAACTCGCAACGCTTTCCTGACAAAAAGAAATCCT TCAGAAAGGCTGAAGGTTTTGGTATGGCTACTGACTTTGCCTCTTATGATGACAAAGATACCTTAAAGAGCATGTATAGTCAAGCATTCAGTTTCTGTGA GAAAGTTAAGGAGAAGTTGAGTAGTGCAGATGACTACCAAGCATTCTTGAAGTGCCTTCACATTTTCAGCAATGGAATAATAAAAAGGAATGATTTGCAA AATTTGGTAACCGATTTACTTGGAAAGCATTCTGATCTTATGGATGAATTCAATGATTTCTTGGAGCGTTGCGAAAATATTGATGGATTCCTCGCTGGTG TCATGAGTAAAAAGTCATTGTCTACTGATGCTCATGCATCAAGATCATCAAAGTTGGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_184255; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_288358
| Blastp | Paired amphipathic helix protein Sin3-like 2 from Arabidopsis with 62.75% of identity |
|---|---|
| Blastx | Paired amphipathic helix protein Sin3-like 2 from Arabidopsis with 60.71% of identity |
| Eggnog | Paired AMPhipathic helix protein(COG5602) |
| Kegg | Link to kegg annotations (AT5G15020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452916.1) |
| Pfam | Paired amphipathic helix repeat (PF02671.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |