| Id Trinity | TRINITY_DN51349_c1_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_287760 |
| Sequence | CATCAACCCATAACATAACATCATCTTAGTTATTATTGTTGTTGGTGTTCATTCTCTTTGGTAGTTTCGTTAGTAACTCCTATGGCTGGTTGGTGGAGTA GAAACTCGTCCAAGAAGAAGCACAAGGAGGATGAAGAAGATGAAAAAAGTGGCAGTGCTAATTTTAATTGTATGAAATCATCAACCAGAAAAAGTAAGAA GAAGGGAAAAGTTAAGGATAAGGTTAATAACTTGGATGAATTATTGCCTCATGCTCAAAGGGTGTTTCAACATGGATATGCTTCTTCCACTTCTACCTCG GGTTCCAGTGCAAGCTCTTCTGCTTCCTTTGATGATCACCCTACTTCACCTCATTTTCATTTTCTCAACAGTTCCTTTTGCAGAGGAGTAGGTACTGAAA TGAAGTTGAATGTGAAGTCAAAAAGTAATGTTGGGTCAAGAGGACCCATTTGCAACCCTGCGGCTATATCACCGCTCCATCCAAGGTTGCATCTTTTCAG TCTTGACACTACTCAAGACCATGGAAGGAGTCAAAGTCAAGGTCAATGTCATCCTCTGCCTCTGCCTCTTCCACCACCACCCTCTCCTCCTCCTTTCAAC ACACCATTGTTAAAAAACACCACCAATAATCTTTCTAAGTGGCAAAAAGGGAAGCTTCTAGGACGAGGAACATTTGGCCATGTTTATCTTGGATTCAATA GTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTTAAGCTTGTCTTGGATGATCAAACATCAAAAGAGTGCCTAAAACAACTTAACCAGGAGATAAATTT GCTTAATCAGCTTTCACATCCGAACATTGTTCAATACTATGGGAGTGAACTGGGCAAAGAAGTGCTTTCCGTTTATTTGGAATATGTCTCTGGTGGTTCC ATTCATAAATTACTTCAGGAATATGGCCCATTTAGTGAGCCTGTTATTCAAATTTATACCAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGGAAGAA ATACAGTACACAGGGATATCAAAGGGGCTAATATATTAGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTCGGAATGGCAAAACATATAAGTTCTTC CGCCTCAATGCTTTCTTTCAAAGGAAGTCCACACTGGATGGCACCTGAGGTTGTCCTGAATACAAATGGCTACAGTCTTCCCGTTGATATTTGGAGCTTG GGATGCACAATTCTTGAAATGGCAACAGCGAGGCCTCCATGGAGTCAGTTTGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAATGATATGCCTG AAATCCCTGAGCATCTTTCAAATGATGCAAAGAACTTCATTAAGCTATGCTTACATAGGAACCCATTAGCTCGCCCAACAGCCCAAAAGTTACTCGACCA CCCCTTCATTCGAGATCAACCAGCAACAAAAGCTTCAAATTTTGGCATAACAAGAGATACTTTCCCCTACATGTTTGATGGAAGCCAGACACCGGTATAG TCTGATGTTTATTTATTTTCTTCATGAAGTTGTGTTTCTTCACCGAAGGTTGCATAACATGCTCTATCCATGTTTGCAATTGTTTTGAAGTTTGGATGAC TCAAAATGTTATAGAATATTGAATAACACATGTTAATGATGATGCCCAAAATCTTAATAGCAATTGACTTTTATCATTATATATATAATTAAGGCACTAT TATACCACATCGGGATATTATCTCATGGATTGTTTAGGTTTTTTATTGTCATGTTTTTAAATGCATTATGTAAACACAACTTCTGTTTAGTAGTATTATC AAACTCCAAAACATTAGAATGTAAAGATGGCCTGTTATTTATATCAATGAAGTGGTACATATGAATTGCTAGTTGAGAATGCAGTTTGACTTGCTGCTTG GTTTTGGTTATAGAGTGACATGTCAAGCACAAATACAACATTGTAAGAAAAAAAGTGTTCGCCTGTCACACTTATGGTTTGCTGGTTGTGTTTGTTTATA ATGATATCAAACTATTTGGCTCCATATTATCCTTTAGAATGTGATCCTCATATGCCTTAGAGCATTGTTGCGATGCATACCATAAGAATTTGTGAAGTCT ATATGGCACAAATGTTAGAGAAAATCGAAGTTGGAGAATAGATTAGGAAGCCGACCATAATCCATAGTTTAATTAGAAATGAAAAGAGAAATACATGAAT ATGACATGGTGGTGGAGTATATAGCTTTATATAGCCTTTGAGTGATGTTTTTTTAACAGCCATGTTATTAAAGGTTCTTAATCCTTGGTCACATTAGTTT GTGCAAATTTCTGTATAATTTTAGCCATGTTACTAGATATGCACCAAGTCCCCAAAAGGGACTTTTTGATCCTTGGATTGAATCCCAGCCAGGCTAATTG GACATACTTCTCAGTCCTCACACTAAATGATGCGATTTTAAAGTTGCCCAGTTTTTGAAGATCTGTTTCTATGGCCAGTGTTGGTCTGAATCTAACTTTC TTGTTTGTTTCTGATAGCAGCCTGTTTTAAAGCCTCATTCGAATCGAACAAGTAAGACTTCACATGATAGAGACTTTGCAACTTTGCCAGCTCTCGCTGC TTCACGTGGGTCAAATAAACCCAGAGATAACACAAGAATGATTACATCTTTACCAGTGTCTCCCTCTTCAAGTCCATTAAGACAGTATGTGGCAGCACAA AAAAGCTGTTTCTCTTCTCCTACTCATCCGAATTACACAATGACCCGACAAAATAATCACACCTCATCATTTCCAGTGAGATTAAATGCAACATTCACTC TTGACCCTCGGCATGAGACATCTCCATATAGAGCTCAAACACCACCTGGTGGATCTCCAAGAAGGAGATTCATTTCAGTTGCTGATTGTAAATACCAGCA GAACTAAGCTCTTTTCAGATTTCCACAGCATGCTTTGTGAACCTCAATCTCAACCCTGAAGCTCAAATTCTAGCTGAAAGGTTCTGGTCCATGATTTTTA CATGTGTACAAGACAGCTGAAGAAATGAGGGGCCATAACATTAATTGCATTGGATTAGGGAGACCTTGTTAGTTGTAACAATTTCTTGATTATTGTAAAT GGTATTTGTTTCCTAAGTTTGTAGTAACGTTTATGCTGTATATTTTTAGTTCATAGTAGAAGAAATAAAGTAATTTTTCATATACACTGTTTTCATTATA AGAATTTATAAGGCTAAGATTTGATTGTATAGGCTTGATAGAGTCAATCTAGTAAGGGGGCATTTGATGCATACTGAGTCATAACACAAACAAAACAATA TGGCATCTTTGGATATGATGGACATCACATTATTAAGTATCAGGGAAGAAGAGCAAGTGAGCATTTATGTTATTATGTTTATGAATAGTTTGTTCCATTC TTTAGCATATGCGCAACATAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_184263; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_287760
| Blastp | Mitogen-activated protein kinase kinase kinase 3 from Arabidopsis with 65.17% of identity |
|---|---|
| Blastx | Mitogen-activated protein kinase kinase kinase 3 from Arabidopsis with 65.17% of identity |
| Eggnog | mitogen-activated protein kinase kinase kinase(ENOG410XQGS) |
| Kegg | Link to kegg annotations (AT1G53570) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462480.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |