Ll_transcript_289796

• Id Trinity: TRINITY_DN51350_c0_g2_i1
• Name Transcript: Ll_transcript_289796
• Sequence: AGAATATAAAACTCCTTCCACCATTAAATTATTAATTAACATTTTCCCACTTCAATTCACCGTTCAAATTTCTCTCATAATTCACATTTAATATTTCTTT TCGGTTACTTTTTTTTATCACTTTCCTACACTATTTGTATTCATTGCCTGAATTCTTGCATTCTCCTCATCCCTTTGAAATTATTACCATAAAGTTTGTA GCTTTTCTTCATTTCTGACTTTTTTGACTTCTGGGTTTTCTCTCTCTCTCTGTGCTAGCTTCATTTCTCACTCTTTTGTACAATTTCACACTGTTTGGAA AGAGAGTAGCTTCTTCTTTACTCTTTGGTGTGTGCAAATGGCTTCCCTTGCTGATATAGGACTATCGGCGGCAATTAACCTCCTTAGTGCATTTATTTTC TTACTGGCATTTGCCATACTTCGGATCCAACCTATAAATGATAGGGTGTATTTTCCAAAATGGTATATGAAGGGTTTAAGAAGCAGTCCGTTGCACACAG GGGCGTTCGTGAGCAAGTTTGTCAATATAGATTTCAAGTCATATGTAAGGTTCTTGAATTGGATGCCTGCAGCATTGCAAATGCCAGAACCGGAACTTAT TGACCACGCGGGCTTGGATTCTGCTGTTTACTTGAGAATCTACTTGCTTGGGCTTAAAATATTTGTCCCCATTGCATTCCTGGCATTTTCTGTTATGGTT CCTGTCAATTGGACCAATAGAACCTTGGAGCGTTCAAATCTGACATATAGTAGCATTGATAAGCTTTCTATGTCAAATATTCCACTCGGGTCCAATCGAT TTTGGACCCATTTGGTAATGGCTTATGCTTTTACTTTCTGGACATGCTATATCTTGAAACGGGAGTATCATATAGTTGCAACAATGAGATTGCATTTTCT TGCATCAGAAAGGCGCCGTCCTGATCAATTTACAGTACTTGTTAGGAATGTACCACCTGATGCTGATGAATCAGTTAGTGAGCTAGTAGAACATTTCTTT TTGGTCAACCATGCAGATTATTATCTTACTCATAAGGTTGTTTATGATGCAAAGCAACTTTCTAGTCTAGTTGCTAAGAAGAAGAAAAATCAAAATTGGC TTGACTACTATCAACTTAAGTATTCTAGAAGTAAATCCGTAAGACCAACTAAAAAGACTGGTTTTCTAGGTCTTTGTGGTAATAAAGTGGATGCTATGGA TTTTTATACTACCGAAATCGAGAAACTATCAAAAGAAATAGAATTGGAGAGAGATAAGTTGATGAAGGATCCGAAATCTATAATGCCAGCCGCATTTGTT TCGTTCAGAAGTCGTTGGGGTGCTGCAGTTTGTGCACAAACTCAACAATCTAGAAATCCAACCATATGGTTGACAGAGTGGGCTCCAGAACCTCGTGACG TGTATTGGGATAACATGGCAATACCATATGTTTCACTCTCAATAAGGAGGCTTATAATTCTTGTTGCTTTCTTCTTTCTCACTTTCTTTTTCATGATCCC CATTGCATTTGTACAGTCACTAGCTAACATTGAAGGGATTGAACGTGCAGTCCCCTTCCTCAAGCCCTTTATCGAGATAAAATTCATAAAATCACTGATA CAAGGTTTCCTACCTGGGATTGCTTTGAAATTATTCCTTATTTTCCTTCCATCAATCTTGATGCTAATGTCCAAATTTGAAGGGTTTATAAGCCTGTCTG CTCTAGAAAGGAGATCAGCCTCTAGATATTATATCTTCCAGTTCATTAATGTATTTCTTGGGAGCATAATCACCGGCTCTGCGTTTGAACAATTAGATAA ATTTAGTCGCCTTCCTGCAAATGAAATTCCAAAAATAGTTGGTGTCTCAATTCCAATGAAAGCAACTTTCTTCATAACTTACATAATGGTGGATGGTTGG GCAGGATGTGCTGGTGAGATTCTAAGGTTGAAGCCATTGATATTTTTTCACTTGAAAAACTTCTTTTTGGTGAAGACAGAAAAGGACCGTGAAGAAGCAA TGGATCCTGGAACTATTGGTTTCAATACAGGAGAACCTCAAATACAACTTTATTTCTTACTTGGCCTTGTTTATGCTGTGGTTACACCCTTTCTACTTCC ATACATCATAGTGTTCTTTGGTTTTGCATATGTCGTCTACCGTCATCAGATTATAAATGTGTACAACCAAGAATATGAGAGTGCTGCAGCATTTTGGCCT GATGTCCATGGACGTATTATATATGCACTAGTGATCTCACAGCTGCTGTTAATGGGATTATTCAGTTCAAAAGGAGTTGCTAACTCAACTCCATTCCTCA TTGTTCTCCCAATTTTAACCATATGGTTTCATATATTTTGCAAGGGACGATATGAACCCGCTTTTATTAGGCATCCATTACAGGAAGCAATGATCAAAGA TACGTTGGAGCGCACAAAAGAGCCAAACTTCAATTTGAAAGAGTTCCTCCAGAATGCATATATCCACCCGGTTTTCAAGGGCGATGAAGATGTTGACAGT GATGTAATGAGTGAAGGGTGGGAGCAGGAACCTGCAGTTGTCCAAACAAAACGCCAGTCAAGAAGAAACACGCCATTGCCTAGCAAGCATAGTGGTTCAC TATCACCCTCCCATTCCCTGAATCATTAGTCATGACACTGTTGATAACCAAGTAAGTAAGGTGAAGTTTAGTGAAAAGCAGCATGATGCTACTACAAGAT ATCCCCTTGTAGTGTAGTTATCTCAGCATAACTTTTATTTCATCTTGCTCTAGCAGCTTAATGATTTCCAAATGCTCAATGACCTTTTGTGCATATACTA TGAAAGGCAACAAAAATCTGGGAGGAGGAGTATTCTGTAGGCCTGAATTTACCAGCTTATAGTTTGTTTTATTTTTACAATCACAATTCTCTCTTTTTTG CTACATTGGAGGGTGCCCGGGGAGAATATAGTTGATGATGAGAAATGAAAAATGTTGATGGCTTTTTAACAACCTAGTCACTGTGTGGGTTAAAAAAAAT TGTTGATGGCTTTTTAACTCCATACCAATACTATTAAGTAGTTAGTTATAACAAAAGAAATCGTCAGTGTCAAATCGTTATGAGAACTATTACCTGTTTT TATAAAATAGAGCAACTGGAATGTTAATGTTTTGGAGGAGTCTCTCTGAGGTCAAGGGTTTAAGCTTTGGATAAAGCACTTACGGG
• Tissue: pods
• Gene name: LI_gene_184266;
• Additional information: details;

Expression of Ll_transcript_289796

FPKM

• PAB: 0
• PNAB: 5
• PS1: 4.2
• PS2: 0
• PS3: 2.4
• PW1: 3.1
• PW2: 0.7
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289796

• Blastp: Calcium permeable stress-gated cation channel 1 from Arabidopsis with 73.66% of identity
• Blastx: CSC1-like protein At3g21620 from Arabidopsis with 73.46% of identity
• Eggnog: transmembrane protein 63C(COG5594)
• Kegg: Link to kegg annotations (AT4G22120)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461627.1)
• Pfam: Late exocytosis, associated with Golgi transport (PF13967.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;