Ll_transcript_289815

• Id Trinity: TRINITY_DN51350_c0_g2_i16
• Name Transcript: Ll_transcript_289815
• Sequence: CTCTCTGCATGAGGAGCCAGAAATTGTTACCTCACAAACCACGTTACTTTTTCAAAAAATATTCCCATAAAGTTTATAACTTTTCTTCATTTCTCACCTT TCCTGCTTCTGGGTTTTCTCTCTCCGTCACTCTGAATTGTTGTGTCACAAAAAGGGAGTAGCCTCTTGTTTATACTATTTAGTGTGTGCATATGGCTTCC CTTGGTGATATAGGACTTTCAGCAGCAATAAACCTCCTTAGTGCATTTGTTTTCTTGGTGGCATTTGCAATACTTCGGATCCAACCTATAAATGATAGGG TGTATTTTCCAAAATGGTATATGAAGGGTTTAAGAAGCAGTCCTTTGCACTCAAGGGCATTTGTGGGCAAGTTTGTCAATTTAGATTTCACTTCATATGT AAAGTTCTTGAATTGGATGCCTGCAGCATTGCAAATGCCAGAACCTGAACTAATCGACCACGCCGGCTTGGATTCGGCTGTTTACTTGAGAATCTACTTG CTTGGGCTGAAAATATTTGTACCCATTGCATTCCTAGCATTTTCTGTTATGGTTCCTGTCAATTGGACCAATAACACTTTGGCTCGTTCAAATCTGACAT ATAGTAGCATAGATAAGCTTTCTATATCAAATATTCCCCTTGGATCAAATAGATTTTGGACCCATTTGGTAATGGCTTATGCTTTTACTTTCTGGACATG CTATATCTTGAAAAGGGAGTATGAAGTAGTTGCAACAATGAGATTGCATTTTCTTGCATCACAAAGGCGCCGTCCTGACCAATTTACAGTAATTGTGAGG AATGTACCGCCTGATGCTGATGAATCAGTTAGTGAACTTGTGGAACATTTCTTTTTGGTCAACCATCCGGATCACTATCTTACTCATCAGGTTGTTTACA ATGCGAAGAAACTTTCCAGTCTGGTTGCTAAGAAGAAGAAAATGCAGAATTGGCTTGACTACTATCAACTTAAGCATTCTAGAAATCAATCTGCAAGGCC AACTAAAAGGGTACACAGATCTGGTTCATTTGAACTCAAAATTGTCTTCCATTTTGAATTTGGTTTCAGCATTAGCTTTCTCTTGTCTCTTTTTAAGCCT TTCCATTTCATTATTTTTCTTCCACTATTTTATTCCAGTGGTTAACATTGTACTTGCAGACTGGTTTTTTAGGCCTTTGTGGTAGTAAAGTAGATGCGAT GGAATTTTATATTACGGAAATCGACAAACTATCAAAAGATGTAAGCGATGGATTATTCTTTTCTTACCTTCTATGTTTTTACAATTTCTCCAGTATTGGA TGTGTCTTCTTTGTGATTGCATTACATGTAACTTACAACTTTTATACCTTCTATGTTTTTGTTCTTTTTAGCCGATGAAGATCTTCAAAGTTGATGCTGT ATTTAATGAAAATTACTTCATACATTGTAACTCTCTTTAAAGGATTACATACCACTTGCTTTAAACATGTTTCTTCAGTTGTTTACATTAAAATTTCAAT AACTAACAATGAAATTATTATATTTCCCTCTAGGTTATGCTACTTTAGATATTTGAATAACAAATTCTAAGTACATGGAGTTGTATTGTTTTCACATACC GATAATATGAAAATCCTTTGTAGAAGCCACCCAGTGAGCATGTTCATCACTATATACACTACTCCAAATTGATTTTCTGTTAAAATGCTTCTGTTGCATA ATTTTGCTGAATACAAATTATTGAATTGTTATTAACATTCAGATAGAATTGGAGAGAGAGAAGGTGGTGCAGAATCCTAAGTCTATAATGCCAGCAGCTT TTGTTTCCTTTAGAACTCGTTGGGGTGCTGCAGTTTGTGCACAAACTCAACAAACTAAAAATCCAACAATATGGTTAACTGAGTGGGCTCCGGAACCTCG TGATGTGTATTGGGATAACATGGCAATACCATATGTTTCACTCACAATAAGGAGGCTTATAATTTTTGTTGCTTTCTTCTTTCTCACTTTCTTTTTCATG ATCCCCATTGCATTTGTTCAATCACTAGCTAACATCGAAGGCATTGAAAAAGCAGCTCCTTTTCTTAAGCCCTTTATTGAAATAAATTTCATAAAATCAT TGATACAAGGTTTCCTACCCGGGATTGCTTTGAAGTTATTCCTCATTTTCTTGCCAACAATATTGATGATAATGTCCAGATTTGAAGGGTTTATAAGCCT GTCTGGTCTAGAAAGGAGAGCAGCCACAAGATATTACATCTTCCAGTTCATTAATGTTTTTCTTGGGAGCATAATTACTGGCTCTGCATTCCAACAATTA GATAAGTTTATCAACCAATCTGCAAATCAAATTCCAAAAACAGTTGGCGTCTCAATTCCAATGAAAGCAACTTTCTTCATAACTTACATAATGGTAGATG GATGGGCTGGTTGTGCTGGTGAGATTCTGAGGTTGAAGCCATTGATATTTTTTTCACTTGAAAAATTTCTTCTTGGTGAAGACAGACAAGGACCGCGAAG AAGCAATGGATCCTGGGACTATCGGTTTCAATACAGGAGAACCTCAAATACAACTTTATTTCTTACTTGGCCTTGTTTATGCTGTGGTTACACCCTTTCT ACTTCCATACATCATAGTGTTCTTTGGTTTTGCATATGTTGTCTACCGTCATCAGGTAAAAATTTGTTCACAAAACCTCTTTACAGTCGGCACAAAGTTA CTATATTTGTAATCACATGAGAATTTCTGAGGATGACTGTTCTATTTTCTGATTGAAGCATATATATCTAGGAGAAACTGATAGAGTTAGAGCAAAGTCA ATCTAAATTCTAAACCATTGAATAAAAATTTTATGTCAAATATATCCATGTTGCCTACATATATTTTTATTACATTTCATAATATCTCAAAAAACAAAAG TACTCCCTTAGTGTATTTAACTTCAAATACAATATATTTGGTGAGGTTTTGTATGAACAGAAGAGTAAATGGTGTAGCTCCAATGCAAGCATAGCATAGT TGCAAATTGAAATTCTGTATGGAAAGAAAAAATTGGTGAGTAGTTACTAATTTCCATCAGCTGCTGGAAACTTAAATGTGCTAGCTCTTTACATGTCATT GGAATTATAAGTTTGCATGTCCTATCTGTTGTTAATGCCTGAAATTGAATGACAGATTATAAATGTATACAACCAAGAATACGAGAGTGCTGCTGCATTC TGGCCTGATGTTCATGGACGTATTATATTTGCATTGGTGATCTCACAGCTTCTGTTAATGGGATTAATGAGTACAAAAGAAGCTGCTAACTCAACTCCAT TGCTGATAGCTCTCCCAGTTTTAACCATATGGTTCCATATATTTTGTAAGGGACGATACGAACCCGCTTTTATAAAGCATCCATTACAGGAAGCAATGAT GAAGGACACGTTGGAGCGCGCACGAGAGCCGAACTTCAATTTGAAAGAGTTCCTCCAGAATGCATATATCCACCCTGTTTTCAAGGGTGATGAAGATAAT GACAGTGAAGTAATGAGTGAAGGGTGGGAGCAGGAGCCCGCAGTTGTCCAAACAAAACGCCAGTCAAGACGAAGCACACCATTGCCGAGCAAGCATAGTG GTTCTGTATCACCCTCCTCTCATTCGCTGCATGAGTCATGACACTGCTGATAACCATTCCAGGCCTTACTAAATTCATTCCTTAGTCCAGTATTAGATAA GTAAATGACCACCTGAGTGAGGTAAGTTTGATGAAAAGCTTGGTAGTGTAGTTAGCTCAGAACTCCTTTTATTTCATCTTGCTCTGGCTGCTTAACAATT TCCAAATGCCCAATCAAACTTAGTTATTTTACTCTTACTAACGAAATCGCTATCTCTCCTTTTTCTACGGTAAGGTTGTTTGTCTTTTAACCTGACAGTG CAAATCTTGAAACAAATTTTCCGCTTGGGAGGATAAAACCGTACAACTACATATGTCTATCATCACTAGACCTTATTAGAGGTGTCAAGGGAAAATATAG TCTGACAAGTGACAGATTGACACAGGCCACAAATCTCCATGAAACTTGGATCAGGAGTCAACTGTTCTGCAAGGTGATCTGTACACAAATTGTGTGTTGC TGAATAACATGTTAAATGGTTGATGATAAGAAACAATTTGCGTGTTAGAGTGATCCACTTTCTAGCAAACAAATAAAACATGTAGGAAGATTGTATACTT ATTTTTCTACACTTTGATCAAACTACAATAAAAGTTGTTTCTCATACTTCTTCAACTTAAACATGTATAATAAGCAAACAAACTTGAGTGCATTTCCAGT CTCCACAGCTTAGCCACTGATATGGGG
• Tissue: pods
• Gene name: LI_gene_184266;
• Additional information: details;

Expression of Ll_transcript_289815

FPKM

• PAB: 0
• PNAB: 0.8
• PS1: 0.1
• PS2: 0.3
• PS3: 0.4
• PW1: 0.4
• PW2: 0.5
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289815

• Blastp: CSC1-like protein At1g11960 from Arabidopsis with 74.36% of identity
• Blastx: CSC1-like protein At1g11960 from Arabidopsis with 74.36% of identity
• Eggnog: transmembrane protein 63C(COG5594)
• Kegg: Link to kegg annotations (AT1G11960)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434074.1)
• Pfam: Late exocytosis, associated with Golgi transport (PF13967.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;