Id Trinity | TRINITY_DN51350_c0_g2_i2 |
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Name Transcript | Ll_transcript_289797 |
Sequence | CTCTCTGCATGAGGAGCCAGAAATTGTTACCTCACAAACCACGTTACTTTTTCAAAAAATATTCCCATAAAGTTTATAACTTTTCTTCATTTCTCACCTT TCCTGCTTCTGGGTTTTCTCTCTCCGTCACTCTGAATTGTTGTGTCACAAAAAGGGAGTAGCCTCTTGTTTATACTATTTAGTGTGTGCATATGGCTTCC CTTGGTGATATAGGACTTTCAGCAGCAATAAACCTCCTTAGTGCATTTGTTTTCTTGGTGGCATTTGCAATACTTCGGATCCAACCTATAAATGATAGGG TGTATTTTCCAAAATGGTATATGAAGGGTTTAAGAAGCAGTCCTTTGCACTCAAGGGCATTTGTGGGCAAGTTTGTCAATTTAGATTTCACTTCATATGT AAAGTTCTTGAATTGGATGCCTGCAGCATTGCAAATGCCAGAACCTGAACTAATCGACCACGCCGGCTTGGATTCGGCTGTTTACTTGAGAATCTACTTG CTTGGGCTGAAAATATTTGTACCCATTGCATTCCTAGCATTTTCTGTTATGGTTCCTGTCAATTGGACCAATAACACTTTGGCTCGTTCAAATCTGACAT ATAGTAGCATAGATAAGCTTTCTATATCAAATATTCCCCTTGGATCAAATAGATTTTGGACCCATTTGGTAATGGCTTATGCTTTTACTTTCTGGACATG CTATATCTTGAAAAGGGAGTATGAAGTAGTTGCAACAATGAGATTGCATTTTCTTGCATCACAAAGGCGCCGTCCTGACCAATTTACAGTAATTGTGAGG AATGTACCGCCTGATGCTGATGAATCAGTTAGTGAACTTGTGGAACATTTCTTTTTGGTCAACCATCCGGATCACTATCTTACTCATCAGGTTGTTTACA ATGCGAAGAAACTTTCCAGTCTGGTTGCTAAGAAGAAGAAAATGCAGAATTGGCTTGACTACTATCAACTTAAGCATTCTAGAAATCAATCTGCAAGGCC AACTAAAAGGGTACACAGATCTGGTTCATTTGAACTCAAAATTGTCTTCCATTTTGAATTTGGTTTCAGCATTAGCTTTCTCTTGTCTCTTTTTAAGCCT TTCCATTTCATTATTTTTCTTCCACTATTTTATTCCAGTGGTTAACATTGTACTTGCAGACTGGTTTTTTAGGCCTTTGTGGTAGTAAAGTAGATGCGAT GGAATTTTATATTACGGAAATCGACAAACTATCAAAAGATGTAAGCGATGGATTATTCTTTTCTTACCTTCTATGTTTTTACAATTTCTCCAGTATTGGA TGTGTCTTCTTTGTGATTGCATTACATGTAACTTACAACTTTTATACCTTCTATGTTTTTGTTCTTTTTAGCCGATGAAGATCTTCAAAGTTGATGCTGT ATTTAATGAAAATTACTTCATACATTGTAACTCTCTTTAAAGGATTACATACCACTTGCTTTAAACATGTTTCTTCAGTTGTTTACATTAAAATTTCAAT AACTAACAATGAAATTATTATATTTCCCTCTAGGTTATGCTACTTTAGATATTTGAATAACAAATTCTAAGTACATGGAGTTGTATTGTTTTCACATACC GATAATATGAAAATCCTTTGTAGAAGCCACCCAGTGAGCATGTTCATCACTATATACACTACTCCAAATTGATTTTCTGTTAAAATGCTTCTGTTGCATA ATTTTGCTGAATACAAATTATTGAATTGTTATTAACATTCAGATAGAATTGGAGAGAGAGAAGGTGGTGCAGAATCCTAAGTCTATAATGCCAGCAGCTT TTGTTTCCTTTAGAACTCGTTGGGGTGCTGCAGTTTGTGCACAAACTCAACAAACTAAAAATCCAACAATATGGTTAACTGAGTGGGCTCCGGAACCTCG TGATGTGTATTGGGATAACATGGCAATACCATATGTTTCACTCACAATAAGGAGGCTTATAATTTTTGTTGCTTTCTTCTTTCTCACTTTCTTTTTCATG ATCCCCATTGCATTTGTTCAATCACTAGCTAACATCGAAGGCATTGAAAAAGCAGCTCCTTTTCTTAAGCCCTTTATTGAAATAAATTTCATAAAATCAT TGATACAAGGTTTCCTACCCGGGATTGCTTTGAAGTTATTCCTCATTTTCTTGCCAACAATATTGATGATAATGTCCAGATTTGAAGGGTTTATAAGCCT GTCTGGTCTAGAAAGGAGAGCAGCCACAAGATATTACATCTTCCAGTTCATTAATGTTTTTCTTGGGAGCATAATTACTGGCTCTGCATTCCAACAATTA GATAAGTTTATCAACCAATCTGCAAATCAAATTCCAAAAACAGTTGGCGTCTCAATTCCAATGAAAGCAACTTTCTTCATAACTTACATAATGGTAGATG GATGGGCTGGTTGTGCTGGTGAGATTCTGAGGTTGAAGCCATTGATATTTTTTTCACTTGAAAAATTTCTTCTTGGTGAAGACAGACAAGGACCGCGAAG AAGCAATGGATCCTGGGACTATCGGTTTCAATACAGGAGAACCTCAAATACAACTTTATTTCTTACTTGGCCTTGTTTATGCTGTGGTTACACCCTTTCT ACTTCCATACATCATAGTGTTCTTTGGTTTTGCATATGTTGTCTACCGTCATCAGGTAAAAATTTGTTCACAAAACCTCTTTACAGTCGGCACAAAGTTA CTATATTTGTAATCACATGAGAATTTCTGAGGATGACTGTTCTATTTTCTGATTGAAGCATATATATCTAGGAGAAACTGATAGAGTTAGAGCAAAGTCA ATCTAAATTCTAAACCATTGAATAAAAATTTTATGTCAAATATATCCATGTTGCCTACATATATTTTTATTACATTTCATAATATCTCAAAAAACAAAAG TACTCCCTTAGTGTATTTAACTTCAAATACAATATATTTGGTGAGGTTTTGTATGAACAGAAGAGTAAATGGTGTAGCTCCAATGCAAGCATAGCATAGT TGCAAATTGAAATTCTGTATGGAAAGAAAAAATTGATTATAAATGTATACAACCAAGAATACGAGAGTGCTGCTGCATTCTGGCCTGATGTTCATGGACG TATTATATTTGCATTGGTGATCTCACAGCTTCTGTTAATGGGATTAATGAGTACAAAAGAAGCTGCTAACTCAACTCCATTGCTGATAGCTCTCCCAGTT TTAACCATATGGTTCCATATATTTTGTAAGGGACGATACGAACCCGCTTTTATAAAGCATCCATTACAGGAAGCAATGAT BLAST |
Tissue | pods |
Gene name | LI_gene_184266; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289797
Blastp | CSC1-like protein At1g11960 from Arabidopsis with 74.36% of identity |
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Blastx | CSC1-like protein At1g11960 from Arabidopsis with 74.36% of identity |
Eggnog | transmembrane protein 63C(COG5594) |
Kegg | Link to kegg annotations (AT1G11960) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434074.1) |
Pfam | Late exocytosis, associated with Golgi transport (PF13967.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |