Id Trinity | TRINITY_DN51353_c2_g1_i2 |
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Name Transcript | Ll_transcript_287239 |
Sequence | TATGTCTCCATCCACTAATAAAATTACATCAAAAAATTATAAAAATAAAAAATATTATTTTTATATTATTTGATGAAACATTGGTTCGGACATAGATATC TAAAAAATTGAAGTTGAGTATTTAATACAAGTTGATTATATTTCTCATAATTTCAGCTCCATTTTCTCTCTCTATTCCTCTCTACTCTTCCCAACTCTAA TACCTGGGATCTATCTTCCTTGTTCTTCATTACTTTCAGCTTCTCATCTTTCTATACCATAAGGTAAAGCTTCCTTATTTGATGCCCTTTTGCTTTTTGC AAATACACTACTTTCCTTTTTTGATCTGGGTACCATCAAAATCAGATATTTCCACCAAATTTAGTATCTTTCTTACATTTTTCCCATCTCATACAGTAAA AACAAAAGACTCTATGTTCTGATTTTTTTTTATTTTTGTGTCATGGGGAAAATTAGATCTTCACACCAAAGTTAGTATCTTTCTTTGTTTTTCCTTTCTG GGCTTTTAATCTATTTTAGTTCCATACAATAACAAGAAGAGGGTTTGTGTTTTTGAGTTTTGACTTGTGTATCATGGAGAAGAACAACAACATAAGTCAC TGTTTTTGTGTTGGTTCATTATTTGTGTTCTTGTTATCAATTGAGCTTATCCTAGCAGCAGATTTTAAGCCAACAGATAAAATCTTACTGAGCTGTGGTG GTCCTCCATCTAGCACTGATGCTGATGGAAGGGATTGGACCACTGATATTGGTTCCAAGTTTGAATCATCTTCAGCCGCCGGAAAAAACTCCACAACATC TCCGGCCGCCACTCAAGACCCTGCAGTCCCTGAGGTGCCATACATGACAGCCCGTGTGTTCTACTCCCGGTTCACATACACCATTCCCGTGGCCCCCGGT TGGAAATTCCTCCGCCTGTACTTTTATCCTGCTTCATATGCAGGCCTCAATGTAACAAATGCCTTGTTCAGTGTCACGGCGCAGCAATCATACACCCTGC TTAGGAACTTCAGTGTGGCACAGACCACACTGGCATTGAATTATGCCTACATCGTGAAGGAGTATGTGATACATGTTGAGGGGGAAACATTGAATGTGAC TTTTGTTCCATCTCTCAATGTATCAAACTCATATGCATTTGTGAATGGGATTGAAGTGGTGTCTATGCCAGATATTTATACATCTAGTGATAGTAGTACT ATGATTGTTGGTACAGATTCTCCTTTTACTATTGATAATAGCACCACACTTGAGAATGTTTACAGGTTAAATGTAGGAGGGAACGATATCTCGCCTTCTC ATGATACTGGTCTTTTCAGATCATGGTCTGATGATGTGCCTTACCTCTTTGGTGCTGCATTTGGAGTTACCGAGCCAGCTGATCCATCTGTGAACATTGA GTATCCTCCGGGCACACCGAGTTATATTGCTCCCTATGATGTTTACGCTACAGCTAGATCAATGGGTCCAAACCCCCAAATCAACTTGAATTACAACCTT ACTTGGATTTTCTATATTGATTCGGGGTTTTCCTATCTTGTGAGACTCCATTTCTGCGAGGGCTCGACAAATATAACCAAGATCAACCAAAGGGTATTTG ATATTTTCCTCAATAATCAAACTGCTCTGCCTGGTGGTGCTGATGTTATAGCCTGGGCAGGGGCTTTCGGCCTTTCGCATTCAAATGGCATTCCGGTGCA TAAAGATTATGTTGTGTTTGTTCCCAATGGAGAGCCGAGGCAGGAACTGTGGCTTGCACTGCATCCAGATACAACTTCGAAGCCGCAGTATTATGATGCA ATCTTGAATGGAGTTGAGATATTCAAGATTAATGATAGTACCGGTAATCTTGGTGGGACAAATCCTATTCCACCTCCTTTGCAAGAAAAGATTGATCCTT CATTGGCTCGATCACATCCTCATGCAAAATCAAAGAATCAGATAGGTGTGATTGCTGGAGGTGTCAGCGGAGGAGTTGTTTTATTACTACTTGTCATTGG CCTGTTTGCTTTTGTGTGTCGCGGTAGGCATGGAAAGGAGTCTAGTGCAAGTGAAGGTCCATCTGGCTGGCTTCCACTTTCTCTCTATGGCAATTCGCAT TCTGCAGGTTCTGCCAAGACAAACACAACAGGAAGTTATGCATCTTCGCTCCCATCAAACCTTTGCAGACACTTCTCATTTGCTGAAATCAAAGCTGCTA CAAACAACTTTGATGATGCTTTAATTCTCGGAGTGGGAGGGTTTGGTAAGGTTTACAAAGGAGAAGTTGATGGTGGAACAACAAAAGTTGCAATTAAACG TGGGAATCCACTATCTGATCAAGGGGTTCATGAGTTCCAGACTGAGATTGAAATGCTCTCAAAGCTTCGACACCGTCACCTTGTTTCACTGATTGGCTAC TGTGAGGAGAACACTGAAATGATCCTTGTCTATGACTACATGGCCTATGGAACACTGAGGGAGCATCTATACAAGACTCAGAAACCACCACTTCCATGGA AGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGGGGTTTGCATTATCTACACACCGGTGCTAAACACACTATCATCCACCGTGATGTGAAGACAACAAA CATTTTACTGGACGAGAAGTGGGTAGCTAAGGTTTCTGATTTCGGATTGTCGAAAACAGGTCCAACATTGGATAACACACATGTGAGCACCGTGGTGAAG GGTAGTTTCGGGTACTTGGATCCTGAATACTTCAGGAGGCAGCAACTTACTGATAAGTCTGATGTTTACTCTTTTGGTGTGGTTCTGTTTGAGATATTGT GTGCTCGTCCTGCTTTGAATCCAACACTTGCTAAGGAGCAAGTGAGTCTTGCTGAGTGGGCACCACATTGTTATAAAAAGGGTATTCTTGATCAAATCAT GGATCCTTTTCTCAAGGGCAAGATAGCACCAGAATGCTTTAAGAAGTTTGCTGAGACCGCGATGAAGTGCGTTTCCGATCAGGGAATTGAAAGGCCTTCC ATGGGTGATGTGTTGTGGAACCTTGAGTTTGCATTGCAGCTGCAAGAAAGTGCCGAAGAGAGTGGTAACGATTTCGGTGGAAAAGTGATTCTGAATGAAG AGGAGACATTGTTTAGTGGTGATGATTGTAAAGGGAAGAAGGAGAGTGATGCAAGTAATGTTAGTGATTCAAGAAGCAGTGGTATGAGTATGAGCATTGG TGGTAGAAGCTTGGCAAGTGAAGACTCTGATGGATTAACACCTAGTGCTGTCTTTTCTCAGATCATGAATCCAAAAGGCCGTTAATTTCATTTACTAATA AGTAATAATATATTTCCTTATACCAAATTTGGTTGTATAATCTATTTTCACTTGTTAATTACTGAATCAGAGTATATTTGTATGCTACAATGTTATTCAT TTTTCTAGTATTATTACTTCTCCTTTGTCTTTATCTTTCTGATTTATTACGAATATGTAATTGCAGTTTATTATTATGCAACATAAAGATTGAAGAGCAA ACATGTTGTAATATTAGCTCCCACTTTTTAGGAGCAGGACTATTCTTCTGTTGTAAGATTAATACACAAGTTGTCAACTATAAAATGCAAATTTGTTGGT ACGTTACATACACATTGAAGAGCAT BLAST |
Tissue | pods |
Gene name | LI_gene_184289; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_287239
Blastp | Receptor-like protein kinase FERONIA from Arabidopsis with 74.46% of identity |
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Blastx | Receptor-like protein kinase FERONIA from Arabidopsis with 72.77% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G51550) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461029.1) |
Pfam | Carbohydrate-binding protein of the ER (PF12819.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |