Id Trinity | TRINITY_DN51354_c0_g1_i4 |
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Name Transcript | Ll_transcript_287856 |
Sequence | GAAAAAATATTCGATAGGAGGATTAACCATATAATAGATATTGTGAACTTAGACATGATTGATTTTAGTGTAGACAGGAAACAAAAAAAAAACATGGACG TTGTTTGCATATTTTTGTGTGGTAGGTGATAGAAGGACCAAGGAAATGAAGCGTGGAACACCTTAACCATACCTTCAATTCCCACGTTCTCGGGTCTGAT ACACGTGGACCACAACATTGCATTGTGCGCTCAAGCTCCTCCAACCTTAACCCGAAAAAATCTATCTTCATTGTCTCTGTTCTCTTCTCTGTCACCATGT CTCTTCTACTAGCAGCTACACAAACACAATCTCTGTTAATTCCTTCCATCGCTTATCACAACAACAAATCTCAACCTCTTATCATCAAAGCCACTCGGAA TCGCTTTCCTTTCACCACAACGCGAAAAACCGTTCATTCTCGGCGTATTCTCTTAACATCTTATCTTCCAAAATCAGCTTCCATCAACGGAGCCTCCTTC CAGAACAATTCAGAAGCTTCGAATGAAGTCAATGCTACTGAATTTCTTCATAGACTCAGAAAATGGATTCAGTTGTTTCCTTCGATTTTGCCAGGTGGAA AATGGTGGGACCTATCAGATGATGATGTTAAGGTTCAGGTTCTGGCTCAACCTGTCACTGTGTGGCGTGCCTTGGCTAAAATGTGGGACCTTGTTTCTCG TGACCGGTGGGTCATTTTTGCTGCTTTCTCTGCTCTTATTTTCGCTGCGGTTTCGGAGATTTCAATACCGCATTTCATGACAGCATCAATATTCTCAGCA CAGAGTGCTGATGTTACGGTTTTTCACCGGAATGTGCGTTTGTTGGTTCTCATGTGTACAATTTCGGGAATATGCAGGTCAAAATCTTTGGGATCCGAGG TTGCTGTTTTGGCATTGCAAACATGATTCTGGTTAAGAGAATGAGAGAAACATTGTACTCTTCCCTTCTTCTTCAGGATATATCATTTTTTGACACTGAA ACAGTTGGTGATTTGACAAGTAGGCTTGGGGCAGATTGTCAGCAAGTGTCGCGGGTCATTGGAAATGATATTAACTTGATATTGCGCAATTTTCTTCAGG GGACAGGTTCATTAATCTATTTGTTGACTTTGTCTTGGCAACTTGGTTTATCTACATTACTGATATGCTCCATACTAGCTGCAGTCATGCTACGTTATGG GAGGTACCAGAAAAAGTTAGCAAGGTTGATCCAGGAAGTCACAGCTTCTGCCAATGAAGTGGCTCAGGAGACATTCTCTCTCATTAGAACTGTCCGTGTT TATGGAACAGAAGAAGAAGAACTTGGAAGGTACAAATCGTGGCTGGGGAAATTAGCTGACATAAGCTTGCGACAAAGTGCTGCATATGGATTTTGGAATT TAAGCTTCAACACTCTTTATCATTCAACTCAGGTTATTGCTGTGCTGTTTGGAGGAATTTCTATTCTTGCGGGTCATATTACAGCAGAGAAACTTACTAA GTTTATACTATACAGTGAATGGCTAATTTTTTCAACCTGGTGGGTGGGAGATAATATCTCCAATTTGATGCAATCTGTTGGGGCTAGTGAAAAAGTATTC CATTTAATGGATCTCGCATCTGGCAACCAATTCATATCTCGAGGAGTAAAGTTGCAGAGCTTAACAGGGCAAATTGAGTTTCTAAACATATCTTTTCACT ATCCTTCAAGGCCAACGGTAGATCTCTATTGCTAACATCTCATTTGAATCCGAGATTTTATACTTGCTTATTTGATGCTCTTTTTGCTCTCCAGTTGCTT CAGTAAAGGATAAATTATGATACAATAGAAATAAAAATTTCAATGCTAATTTTTTTGAAAACACTCCCCTCCCCTAAAAAATCGTGGGTTCATACATCAA GAGTGTATGCTGTTGACAGATAATCAGTGGTGATATGGTATGCTATTATCATCTTTCTAGGAAAATGGATGTTTAATATTAACGTTGATTAAAAAAAATT ATTTTTTGGGGTTGTGAGAAGAGTTTTTGGATCAGTGTATTATCTAATGCTTCCTCATTATAACACTGTGCATGTAACTTCATTCTTCAATAGAAATGAA ATTTCTGAAGTGAGTGGAATGGTTTATATTCTGGGTATTATGTTGACATCTGAATTCTTCTGGCACCCTTCTCTTTCTCTCTTTGCATGGCTTTTTTAAC CAGTTACATTCAGTTTTATTGTCCATCCACATGAGGTTAAGATTATCATTGTCAGTCATACAAGCTCAATTAATGACAGGGCACTGTAACAGGTACCGGT AGTGCAACTTGTAAACTTTGTTGTCTATCCCAGTGAGGTGGTTGCAATTGTTGGTCTTAGTGGTAGTGGAAAAAGCACAATGGTAAACCTTTTGCTCCGT CTGTATGAGCCTACAAATGGTCAGATTTTGATAGATGGAATCCCTCTTAAAAACTTGGATGTCAAATGGTGGAGAGAGAGAATCGGATATGTGGGACAGG AACCCAAGCTGTTTCGAATGGATATTAGTTCAAACATCAGATATGGATGTACTCGAGATGTAAAGCAGGAGGATATTGAATGGGCTGCAAAGCAGGCTTA TGCCCATGATTTCATCGCTGCACTTCCCAATGGTTATGAAACACTTGTTGATGATGATTTGTTAAGTGGGGGACAAAAGCAGCGAATTGCTATTGCTAGA GCTCTTCTTAGGGACCCAAAAATATTGATCCTTGATGAAGCCACCAGTGCATTGGATGCTGAGAGTGAACATAATGTCAAGGGTGTTCTTCGATCTGTGA GAAGTGATTCCCATTCGAGGAGAAGTGTTATAGTCATTGCACACAGGCTTTCTACCATACAAACAGCTGACAGGATTGTGGTAATGGATTGTGGTCAAGT TGTTGAGGTTGGTAATTGTTTATTCATTTCGAATGCCCTAAATATTCTTAATTTGTTTGCTTCATTACCAATGTAAATAAAACTCATGCCTGTGAAAAGT GTTAGAAGGTTATACATGTTTTCTGAATGTCAATATTTATGGATTTAAATTTGACTCCTCTAACTCTTCTGCTGGTTCATGATGAGTGAACATAGCACAT ACATATAGGATAGAACCATGAAGACAATGATTGTTGCCATGTTTTTATCTCATTGTTTAATTATGTAGGGATAAAACTCACATTAAGTTTCTCTTGTTTA ATTAAGGCTTGTTTAACAACCCATGCATTACTGTATCACCCCAAAAAAAGTCACATGTCTTACTGAAACTGAGAAATGTGTTGAATGAAAAAGTATATCT TGTTTTTTCCATTATCCTTTTTTTACCCTAACCTTAAACATAATGTCATTAACTTGTGTCCTCTAGAATGGAAGCCACAGGGAACTTCTGTTAAAAGATG GTCTATATGCACGGTTGACCAGAAAACAGGCCGATGCCATGGCATGATCTTGGTTTTCCATAGAACATCTTCTGAATGCAGAATAGTGGGGCAAGCAACC TTTTTTCTCTTGCTGACCCATATATTTATAGATACAAGAAAAAATTGTGAAGTTTTATCAAAGAAAGACCTGCATATTGGTCAGGCGGATTCGGTTCAAA AGCAAGGCAGCCTCAGAAAGATTTCACGGTATCAGGAGGTTCTCAGGCATATTTATGCAGAAAAGCATGAAACCAGGTCTATGGGGCTTATTGATCTCCA AGATGCTGATAAGTTACACTCTCTCATCCCATTAGTGAAACTTTGACTTGCCTGAGTTATATTCCACTTGGTACTCAACTTGAAATGTACAAATTATCTT TATATAATTAATTAATTAATGAAATAAATAATTGTTATTTAAAAAAATGATGAAGCAGACATGTTTTATGTGTTTGTTGATACCAAAATGAGTACATTCA ATCCAAAGAAGTTAATAAATATGAAAAACAC BLAST |
Tissue | pods |
Gene name | LI_gene_184293; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_287856
Blastp | ABC transporter B family member 26, chloroplastic from Arabidopsis with 81.56% of identity |
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Blastx | ABC transporter B family member 26, chloroplastic from Arabidopsis with 67.46% of identity |
Eggnog | (ABC) transporter(COG1132) |
Kegg | Link to kegg annotations (AT1G70610) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_006574634.1) |
Pfam | ABC transporter (PF00005.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |