Ll_transcript_288872

• Id Trinity: TRINITY_DN51357_c3_g1_i2
• Name Transcript: Ll_transcript_288872
• Sequence: GGCAGCGGCTTTGACGGGTTTAGGGAGATTGGTCGAGGCAGTGAGGGAGTGTGAGGAGGCTGTGATGTTGGATCCTAAGTATTGCAGGGCTCATCGCCGA TTGGCAACTCTTTTCCTCAGGCTAGGACAGGTTGAGAATGCCAGGAAGCATTTATGTCATCTTGGGCTGCAGCCGGATCCATCTGAGATGCAGAAGTTGC AAATGGTTGAAAAGCATATCAGCAAATGCACAGACGTAAGAAGGATAGGGGATTGGAGAAGTGTTTTGCGGGAAGTTGATGCTGCTATTGCTGCTGGAGT CGACTCTTCTCCTCAGAGCTGAAGCTCTTTTGAAGCTCCACCAAATTGACGATGCAGAATCAATTTTGTCGCGTTTTCCCAAATCAGAACGGCATACTAA TTCCTCTTCACAAGCAAGATATTTTGGGATGCTTTCTGAAGCCTATTCCTACTTTATCAGAGCTCAGATTGAGTTGGCATTCGGAAGGTTTGAGAATGCA GTTACAGCGGCAGAGAAAGCCAGTCATATTGATTCCCGAAATGTTGAAGTTGCAGTCTTGCTCAACAATGTAAGGATGGTTGCAAGAGCTCGAGTGCGTG GCAATGATCTTTTTAAATCCGAAAGGTTTACTGAAGCTTGCTCGGCATATGGTGAAGGTTTGAAGCTGGACCCTTCAAATTCCGTTTTATATTGCAATAG AGCAGCTTGTTGGTTTAAACTTGGACAATGGGAAAGATCAATTGAAGACTCCAATCAAGCTTTACTTATCCAACCAAATTACACAAAAGCCCTTCTTCGA AGGGCTGCTTCTAACAGCAAGCTTGATAGGTGGGAAGAAGCTGTCAAAGATTACGAGGTCCTGCGGAGAGACCTTCCAAATGACAATGAAATTGCTGAAG CTCTTTTTCATGCACAAATTGCACTGAAGAAATCACGTGGCGAAGAAGTACATAATTTGAAATTTGGCTGTGAAGTGGAAGAGGTTTCAGGTCTTGAGAA GTTTAGAGCTGCAATATCTTTAGCAGGTGTTTCTGTTGTCCATTTTAAAATTGCATCAAATTTACAATGCAAGCAAATATCGCCATTTGTGGATACACTA TGTGGTCAATATCCATCTATTAACTTCCTCAAGGTCGATATTCATGAATGTCCAACGATCGCCACTTCTGAGAATGTTAGGATTGTGCCAACCTTCAAGA TATACAAAAACGGAAATCGAGTGAAGGAAATCGTATGCCCTAGTCGTGATATGTTGGAACACTCTGTGAGGCATTACAGCTTATAGAACTTATGACTTGC ACTGCTTCTCTCTGTTGTCTTTTGCATTCCCTTCTTCTTGCCGCCAAAACCTCCAGTTAAGCTCACAAGTCCTTCCCGTTCTTCCAGTCTCCCGATCCCA CCATAAAACGATCACCTGATACCTGTGACATAGTCAAAACCAGATAATAATCTTAAGCAGCCAATGCCATTGGAACCAAGAGATAGTCTAGTACCTTTAT GCATTTTTATTTATTCATTCATTCCCCATTGCTCTTTGGTTCCATGTTCCTCCCAACTCCCTTTGTGAAGTTCCTTTTTATCTTCATTTCAGTTCACTCG GTCAGCTCTTCTTGTATCACTACTTTCTTTAAGTTTAAAGGACAAAAAAAAACCAAAAAAATATGTTTTTGTATGTACAATTGATTCAATTATGAGTTTA AATTACTTTTGAGACAGACAAATATAGACAGAAGGAAAGGGAGGTACGTGTATATATTTTATGATATATACTAAACAGTGGAAGCCTTAGAAGGAGATAA TATGAATGGTGGGTACCTACTACCTATTGAGTTAGCCAAAGGAGGGTGAAATATGTTGTTATTATTATTATTATTTATTTTTCCTTCCTGTCTTAGCCAT TTAATCAATAAAAGTTCCCATTTTTTGTTATCCTCCATGCTTTTTATTTACTTCAAGTAACATTTGAGAGACATGTTAGAATGGTACTTTGCTCTATGTT GAACATGTTTTATAAATACAACAGAACATGTACTTTATTCTGGTCTGTTCACTCTACCATAAAGACCAAAACCATACAAGTGATGAGTGTTGAGAAGGAA TTGTCCTATGTATTGGGCAGAGGTTTGAAAAGCTGACTTGGTCTTGGGATTGGAAATCATTTGGTTATGGCATTTAATTTGATGTCGGTTGTAAAATTGT TAGTATAAAAGTTTATACACAATCATTATATTATTTATCATTCATTTGTATTATTTATATTTAAAAGTTAACGATGATCAAATATGAATGATGAATGATA CAGTGAGAGTGTAAAAATAGTATACATCTTTTGCTATTTGTTATGTTTGATACGTAGAGGCAAGGTAACGTGTGTTCTTAAATGAAGGTTGGTTATGATA TTAGAGGGGAAGTGGACTTTGACCCTTTATCCCTTTACACTTTCCTATATAATGAAAGGTGGACCACTAATTCCTGTTTGATTTTTAATACACTGAGCAA GCTTGTTTATATAGCTAAGTTGTGATGCTTGAAAAGCACTAAAGCAGAATAATAAAACTAATGAGAGAGGTTGCCCTTTGAGGAAAGGGGTTATGTTCAC ATGTGGGCATTTAAGAAGTTGCTTCTTCCAAAAGAGGGCACTCAAAGCTACCATAAAAGAGTCCAAAAGGTCATATTGGTGGGTGTTTGAACTTTGATGT GTTGCTCTTCATATTAGCTGTGTTGTGTGATATGTGAAGGCAAGTCATTCCAATTGGTGGTGGGGCTTGATTAGATGATTGCCATTCTTTGTGGACCTAT TCAAGGTCATTGCCACATGAAGTATATTCACTATTCATTTTTAGTTTTTATAGATTTCCATATCTGATTTCATGTATATGTAAAAATAAAA
• Tissue: pods
• Gene name: LI_gene_184314;
• Additional information: details;

Expression of Ll_transcript_288872

FPKM

• PAB: 0.9
• PNAB: 0.6
• PS1: 0.5
• PS2: 0.2
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288872

• Blastp: TPR repeat-containing thioredoxin TTL1 from Arabidopsis with 68.62% of identity
• Blastx: TPR repeat-containing thioredoxin TTL1 from Arabidopsis with 69.43% of identity
• Eggnog: TPR repeat-containing thioredoxin(ENOG410ZSQA)
• Kegg: Link to kegg annotations (AT1G53300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456891.1)
• Pfam: Tetratricopeptide repeat (PF13431.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;