| Id Trinity | TRINITY_DN51373_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_288523 |
| Sequence | TGTATGAAAATGCGTGATCTCAAAATTTAGCACTATTTATTACCTCCACCTTTGTTTTTTTCTTTTTGGCCTCACAAGTCACAACTGAAAAGAAAAACTA GCTAGTTACTAACTCACTATATACATCAAACTTTGTCTCACAAAAACAACATAGCACCAAAGGCACAAAAGCTCAATATTGTTTAGCTAGCTTATTCTTT AAGCACCTCAATTTCTTTTGAAAGTTCATCATACAATTCAATGAATGAGAAAATATTTGGCTCCTCCCATCAAATTTCCAAGAATGGAAATGATTTTCTT GAACTAGGATGGGAAAATGGTGAAATTGTTGTAAAAAGAGGTTCATCAAATATAACACAACATAACCCTTCATGCAATATTGAGTATTCAACAATAAACA CTTCACATAAAGATGAAGCCATATACACTACAAAAAGAACAAGGTTAAACAAATTATGTTCACTTTTGAATAATCAATTCCCACCTTATAATGACTTTAA CCTTAGCTCTTCAAATTTACACCAAACCAAAGACCAAAATGATTTTCAATTATCACAAAACAACAAGAGTTTCAATAAGGTTGAAGAAGATTTTGCAACC ATAAAACATGAAAAAGTGTTATCTCCTTCATTAGAAGAAAACTCAAAGAAACTCAAGTGCTTGGAAAATTGTGATCAAAGAAAAGTGAAGGTGAACAACT TCTCCAACTTTTTAGTACCTAAAGTGTTTCTCAAATCTACTAAGCCAATAAGAAATGAAACTTTTGCAAAGTTAGAAGAGATTGAAGTAGCAAAAGGATC AAAGGGTATCAAAGGATTTCATGATCAACAAACTTCTTTAACTACTAATGATAAATCAAATGATCATGTATCTCTTGTTGTTGCAAAAAGTGATGAAAAA ACAGCTCTTGATGATGAAAATTCTGAAGCTGTGGCTATTGTTAGAGCAAAGGGAAAAGCTAAAAATAGCTTATGTGATGAACCCTTGCTCTCATCTTCTC ATGTATGGTCACTTGAAGCCTCAAATGACCCAAAATTTTGTGTCATGAAACATGAAGATAGTGATGAATCAACTTATTCTAGCAGAGATAATAATGAAGA TACAGAAGATGTAGTAGTAAAGGAAACACTAGCACAAGAGGGTAACAATGTCAAGAGAAAAAGGAATGCTGAGACTTATAATTTATGTGAAAAGAATCAT AGAGATATAATGAACAAGAAGATGCGTATATTGAAAGACCTTATACCAAATTGCAATAAGGTGGACAAAGCTTCATTGCTAGATGATGCCATCAACTATG TAAAGAGCCTCAAGCTTCAATTACAGATTATGTCAATGGGTAATGGACTTTGCATGCCACAAATGATGTTACCTCAATTAATGGGACCTGGGATGGGTTT CAGTTTCAGGCCAAGCACAGCCATTAATCCTTGGACCCTACAACAGTTACCTATTCCATCATTGTCTAGTATCAAAGACAACAACACACTTCAGAATATG TTTGGTTCTTTCTCCAACCAAATGTTACAAATCCCACCAATTCCACATCATGTACCTAATTTCATGCCTATGATGATTGGAAACAATTCTTCTTTACAAC AACAACTTATGCCAAACACTGCACCTACCAACATGCAAAAACATCTTGTTAACTCTTCACTAACAACTCTAGATGTTTCAGATCCACATGCAAAATCTGA ATTATGTGGCACAAATCAAGCACAGAATCAGGCTTCATTTGACCACATTCCTAGTTATTATCCCTTTTGATTTTGCTACAAATAAGGGAAAAAAAATAAT GGAAAGGAAAACTACAATGATATAGGAACTAGGAAAGATATTTTCTGGAAAAAATTGATACACTTAAACCCAACATTTGTATTGAATAGTGCATGATGTA TGTGTAGCTGAATTAGTATATGCAATGTTTTAAATTTGAGTTCTCTACCATAGTGAAGGTCCAAATATTAAGAATTTTGTAGCCTTTCAAGCTGCCTCAT TGTATCATAATTGTTGCCCTAATGGCTGTATTACAATTTTAATAAGAGAATAAAATATACCTAACGAGATAAGTTTTCTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_184440; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_288523
| Blastp | Transcription factor PIL1 from Arabidopsis with 40% of identity |
|---|---|
| Blastx | Transcription factor PIL1 from Arabidopsis with 42.21% of identity |
| Eggnog | phytochrome interacting factor 3-like 1(ENOG4111DYW) |
| Kegg | Link to kegg annotations (AT2G46970) |
| CantataDB | Link to cantataDB annotations (CNT0001979) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418670.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |