Ll_transcript_288526

• Id Trinity: TRINITY_DN51373_c1_g1_i7
• Name Transcript: Ll_transcript_288526
• Sequence: CAACATTTAGCCCTATTTATTACCTTCAACTTTGTTGCTTTTGGGTCTCACAAGTCTCAATTGAAAGCATACTAAGTTATCAAACTGTGGCACACAAAAT CAACATAGCACCAACACCATAGAACCTCAATATTGTTTAGCTTATTCTCTAAGCACCTCAGTTTCATATAAAACTTCATACAATTCAATCACTGAAAATA TGTTTGATTCCACCCACCAAGGCATCTCCTCCAATCAAATTCCCATGTATGGAAAGGATTTCCTTCTTTCAAATGTACAAGGAGGTTCATCAAATAAAAC ACCAAGTAACCCTTCTTTCAATAAGATTGAGTATTCAACAATGAACCCTTCACATAAGAATGAAGCCACATGCATTATTACAAAAAGACCAAGGTCAAAC ACAGTTACACCTTCCAAAGATTCTGATTTGAGTTCTTCACATTCACATCAAACAAATGATCAAAATAACAAGAGTTACAACAAGCTTGAAGTAGAAGAAT TTGCAACCATAAAACAAGCAAAAGAATCTACTGATAGTCACTTATGTCCATCTCCACTAAAAAAACAAAGAATGGATTCAAGTCAAGCACCAAAGAAACT CAAGTACTTGAGAAAATGTGATCAAAGACCAGCAAAAGTGAACAACTTCTCCAACTTTTTAGTACCTAAAGTGTTCATCAAATCTACTCGGCCAGCAAAA AAAGCATCTTTGGCAGAGTTGGAGGAGATTGAAGTAGGAAAAGGATCAAATTGTGTCACAGGATTTCAAGATCATCAAACTTGTTTAAATGCTAATAAAT CAAACAAACATGTTTCCCTTGTTGCAAGATGTGATGAGGAGCCACCACTTGATGAGAATTCTGATGCTATTCTTAAAGCAAAGGGAAAAGCCAAAACTAA TAGTAGCTTATATAATGAGCCATTGCTGCCATCTTCTCCTGTATGCTCCCTTGAAGCCTCAAATGATCCAAATTTTTGTATCAGAAAACATGAAGACAGT TATGAATCAACTTATTCTAGTGATAATGATGAAGAGACAGAAGAGGTAGAAGTAAAGGAAAAGGTAAAGAGAGGAAGGAATGTAAAGATTCATAATTTAT ATGAAAAGAAGGGTAGAGATAAAATGAACAAAAAGATGCGTATATTGAAAGAGCTTATACCCAACTGCAATAAGGTGGACAAAGCTTCATTGCTTGATGA TGCCATAGACTATCTTAAGAACCTCAAGCTTCAATTACAGATTATGTCAATGGGTAGTGGACTTTGCATGCCACAAATGATGTTAACTCAATTATCTGGT GCTGGAATGGGTTTCAATCCTAGCACAGGCATTAACCCTTGGAGCATACCTCAGTTCACTTTTCCACCATTGTCAAATATCAAAGACAACACACTTCAGA ATATGTTTGGTACTTTCTCCAACCAAATGCCACAGATTCCAATTCCCCATCATGCACCTAATAGTTTCATTCCTATGATGATTGGAAACAATTCTTCTAC ACAACTTGTGCCAACTACCCTACCTACCCACATGCCAAAACATGTTGCTAACTCTTCCGAGTTAACAACTCTAGATGTCTCTGATCTAAATGCAAAGGCT GAATTATGTGGCACAAACCAAACAGAGGTTTCCCTTAACCACATTCCAAGCTATCCCTTCTATTTTCCCACAAATAAAGAGGAAAAGAAATAATGGAAAG GAAAAGTAGAATGTAGGAACTAGGAAAGATATTTTTTGTGGAAGAAAAATGTATACACCTCAAACATTTGTGTAGCACACTGTGTATGATGTAAGTGCAA GTGTGCAACTGAATTAGTATATTTAAGATTTTAAGTTTGGGTTCTACACTGTTAATAAAGACAATGTAACTGCAACTGTAACTACAATTGCAATTTAGAA CCTGGATTTTATGTAAAACTGGAATAAACATATTAGGTATAGATGTACATGTAGAGAAGAAGCCAATGCTGATTCTCTTGACTTAAGGGAATCAATCTGA GGAAATTATAGTTTTTTGAGCAAATGTAGATAGGAGTGAACTTGGAAAGAAGTATGAAAACAAGCATGAATACATCATAACAACCATTATGTTAATGTCG TGTCTGTATCGAACGCATATCTGTATCAG
• Tissue: pods
• Gene name: LI_gene_184440;
• Additional information: details;

Expression of Ll_transcript_288526

FPKM

• PAB: 0.7
• PNAB: 9.8
• PS1: 0.9
• PS2: 4.8
• PS3: 0.8
• PW1: 4.8
• PW2: 5
• PW3: 5.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288526

• Blastp: Transcription factor PIL1 from Arabidopsis with 37.39% of identity
• Blastx: Transcription factor PIL1 from Arabidopsis with 36.49% of identity
• Eggnog: phytochrome interacting factor 3-like 1(ENOG4111DYW)
• Kegg: Link to kegg annotations (AT2G46970)
• CantataDB: Link to cantataDB annotations (CNT0001979)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440653.1)
• Pfam: Helix-loop-helix DNA-binding domain (PF00010.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;