Ll_transcript_289340

Id TrinityTRINITY_DN51375_c2_g3_i1
Name TranscriptLl_transcript_289340
SequenceCTCTTCACGTCTGTGACTCACGCACCGACCACCACCGTAACTTCCTTCATTTCATTTCCCCATAGCATTATATACAAACAAACAAAAAACAAAAAACAAA AAACTCTCTCTTCTCTCTCTCTCCTTTCCATGGTGGAACGAAGAAACAGAGTCAACAGAAGAAGAAGAAAGATCAGAGAGCAATTTCGAAAATCAACTAG GGTTTGCTGAATTCATTTCATTCTTCTTTGCAAAAAATGCCGTTGTCGAAGTACCACATAAGGAACGAGCATAGTTTAGCTGATCCGGAACTGTACCGTT CAGCTGATAAAGATGATCCAGAAGCTCTTCTTGAAGGAGTTTCCATGGCAGCACTTGTTGGTTTATTGCGTCAGCTCGGTGACCTTGCTGAGTTTGCTGC ACAGATCTTTCACAATTTACATGAAGAAGTTATGGTTACTGCTGCCAGAGGCCACTGTCTTATGGACCGTGTTCAACAGCTTGAGGCTGAAGTTCCTTCG CTTGAGAAGGCTTTTTACTCTCAAACTCATCATTCATCATTCTTTACTAGTGGAGGGATTGGTTGGCATCCTAATCTTCAGTCTGAACAAAATCTCGTTA CTCATGGAGACATGCCACGATTCGTAATGGATTCATATGAAGAATGCCGTGGTCCACCAAGACTGTTCCTTCTGGACAAGTTTGATGTGGCTGGGGCTGG GGCATGTCTGAAGCGTTATACTGACCCGTCATTCTTTAAAATTGAGTTACCTTCAATAGCAACAGGAGAAGTTCACAGGGAAAAAAGAATTCGTAAGGTC AAGAAGAAAGGAGCACGGTTGAGGGATGGTGAAGCCCCCATTGTACAATCACATTCAAAATTACATCAGCTGCTTCTTGAGGATCGTATTGAGAATGGCT ATAATAATCCTGCGCGCCTTGTGAAGTTGAAGAAACGACAATTGAATGGACATTCAGCTGAAACAGAAGCTGAGAAGTGTTACATGGAGAAATTTTTGGA AACTCCCTCACCTGCCAATAAAATGATTTGTGAAACTTCACTCATTCCGCTACCTTTGAAATTGACGTTGGATGATACTAGTGAAGCAGGGATTAGAATA CTTGAATATCTCAAATCCCTTAATGAGGAGGAATTAGAACTAAAACCATTTTCAGAAGTGAATGGTGAGACATATGGAGATCTTCCGGAGGCAAAGGAAC AAATCTCACTTGGTGTGACAGATGAAATGTCTTCTAGTGATCCTAAGTTGCCTCGTGAAAGAGAAGTGACAGTACATGATCAAATGAAAATACAAGGCAC CTTAGATGGGTATCATTCTGATGATGTGGCTAGTGAGGTTGACAGTTATATGGATGCTTTAGCAACCATGGAGTCAGAATTGGAAACAGACAATGAGTGG AAACCCAAGAAAGGCTTCTTGAATATTCAAAAGGTAACAGATACAGATGGTAAAGAAGAACATCAACTACAAGCTCGATTTTCAGATTCTCAATCATTTG GAGACTCCTCAACATCTGATGATATTAATTCATTCAAAGAAGATGGAAATGGAGAAAAGGTGCAAGCTCGGCTTTCAGATTCTCACTCAACTGGAACCTC ATCTACATCAGACAGTATTAGTTCAATCAGAAGAGATGGAAATGAACATGTAGAACTGCTAGCTCACTTTTCAGATTCTCAATCAGTTGGTAACTCCTCT ACATCAGATGAGAATAATTCTTTCAAGAAAGATAAATCCTGTTTCACTCACTCTGCTTCATTAAGCACTGTTGTTGAAAATATACCATCAGAGTCTATAT TATTCAGATATGCCAAGTATCACAAACCACAGGTTGAGAATACGTCATCCAACCAGATTCCACTAGTCGTTGAGTTTCAAAATACAGATTGTGGTAAGGT TGTCATGCATGATGATGCAAATGTTAAAGAAGAGAGTTCTGATTCTTGGCAAACCTCTTCAGATCTTGTGACTACAGGACTTGATTTGTGTTCCGCCTCA CCAGTGACCTTACCTGCAGGGACTCAATCAGATGAAATCCCACCTGACCCTGCTGAACTTAATTTAAGCTTAGAAGATAATGAAGACAGAACAGATCTTG TTGAATCTATTTCTGCCAAACCTATTTCTCTCTCCCTAGTAAAAGATGATGCTTTCCCAGTGAATTCTTCCAATAAAAGATCTGTAGACAACTTGGAGGA TGATGATCCATATGTGCATTCTGATGATTTGGAAGATCTGTCACTTGTTCATCCAGTGAATTGCTTTAATGGGGAGGTATCTTCAGATTTAATTCTTGAC AGTCCAAATGATGAACCATGCTCAGCAGAAATTCAAGTTTTGCATTCTGATCTGCAATCAAAGATGGTGCATAGTGATAAAATACGTGAATCCACCTGCA GTGTTGATCCATTTGATGGTAATGGCTGTTTTAAAAACCAATCTTCTCCTGATAATCTTGTGATGGTGAATGATGTGGTAACTGAAAATATTCAGTCAGA AGATCAAGCTATTTTTACTGTTTCTTCTGTTGATAATGCTGAAAATGATGCTGGTATAATTACTTGTCCACCTTCAGGTCTGATCAATTCTCCATCAAGG AGTCTTTCAGATTTGCAAGAACCTCTTTCCGGTTCTTCAGATTCTTATAAGATGGCTATGGAATTGGCTCAAATTTCCATGGACTTGAATAAAGAGAAGG GGGAGAATCCGTTGGAACCATCAACAGAGATAACATCATCTGATACCATATTTTCTCCCATGACTAATGTAACAAAGTCGGTAGAATCTTTTTCTTCTTT CGAAGATCTACATGAGAAAGAGATGGAAGTCAGTGAGGCAATTGGTGAACAATATTTTTCAGAATTAGAGGAACAAAAAATAATGGATAAACCCGAACTT GCTTGTGCCGATGTTCAATTGAACTTAAATAAACCAGTGCCGTGTGATCCTAATGATTCCGAAGGATGGAATAATATTCAAAATTCTGCTATTGAGCAAT TCTCGCACGGTGCTTTTGTTGATGTGAAAATGTTGCCTGAATTTTCAAGGTTAGACACTCAGCAGTCAGAATCTATATTTAATGACCGGAATGATCTTTT ACAGAACGGGCAAGAAAATTATCCATCATCTTCCTGTAACCAGATGGAGTCAGAAACTGATGCTGAGCTATTCCTGGAATCACAAATTGGGGAACAGGAT ACAGAATTTCTGCCCAGAGATGAAGAAAACTTCGCCTCTGAGAAATCTCAATCTCAACAGATGCAGAGATACCGATCAAAGCAAGAAAACGTTCATGCTA CTTCTGAATTTGCTCCAGAAATATATGGAGATGGACCATCTTCATGTTATTCACCTGGCCAGGAGATTAATACAACCGAACATGTCATGGATCCATTGAA ATATCCTCTTCCTGACTTCATTCCCAAGGCAACTGAAAATAATCTTGATGTGATACCGCCTATGCCCCCTCTACCTCCTATGCAATGGAGAATGGGCAAG CTTCAGCATGCCTCCCTCTTTTCTAAGGGAGAAGAGGTAGAAGTAAATTGGGACTCGGTCCAAGCAATGCAGCCAAGTAAACCTGATAAAAAATCCCAAT CTGGTTTTCCAACTTCTGAGAGAGATAAGTTGCTGCATCAGAGTCCATTTTTGCCTGTCATGGCTGTGGGAAGTGATAACCTCCAGCATTCTGGGTTTCC AGTGGGAGTTTCAGGGAATCCTGTTGCCATACCACTTAAATTACCAATCATGGTTAATGATGCAATTGGTCAATATAATTACGTAGTGCTGGATAGAAAC CAAATCCAGAACCCTTTCTTAACTTTACCTGTTGTATCTTCAGGTAGGCCTCCACATGATTACATTGTTGCTTCTGAGAGAGAAATGGTACAGAATTCAA AGCTATTCTCTTCTATACTACCTGCTGAATTTGCTGCTTCTGGACGTGATTTCATTTCTCCACCAGAAAATCTGTGTCACCCTCCAAGTCAGTTCATGAC CCAGATTAGTTCAGAAGTTAAAGCACCTCAACATTCTATAAGCAATGTAGTGTCTACAGGCAGGCCTCCAAATGGTTGTGATGGTGATTTCGAGGGAGAA ATGCTACCGAGTTCAAACCAATACCTAAAAATACCACCTGCTGAATGTGCTGTTTTTGGACACGATTCCATTGCTCCACAAGAAAATCTGATTCAATCTC CAAGTCAGTTAATGTCGGAGACTAGTTCAGTAGTTAAAACACATGAGCAGTCTATAAGTAATGTGGTATCTATGGGGATGGCTCCACATGGTTATGCTGT TGCTTCTGAGGGAGAAATGGTACAGAATTCAAACCCATTGCCTCCAGTATCACCTGCTGAATGTTCTGTTTCTAGACAATGTTCCACATCCCTACAAGAA AGTCCAACTCAACCTCCAAGTCAATTAATGACAGAGACCAGTTTAGAAGTTAAAACACTTCAGTCTATGAGTAATGCAGAAGGGGAACAAGGGCATCCTT TTATGTCACTCATGTCACCACCAAATATGGGAAGTATGGAGCCTAATCAGAGTTTTCTGCCTTCTATGGGGGAGATGCCATCGTACTTGGATATATATGC TCAAACATCAGATTTTGAGAGTGAAAGGATAAATGGAAAACCAAAGAATAAGCTTCCTCGTCCCCGGAATCCTCTAATTGATGCGGTTGTTGCTCATGAC AAAAGCAAGCTTAGGAAAGTTACTGAACGGGTTGTGCCTCAAATAGCCCCAAACGTAGAAGAAAGAGATTCGTTGTTAGAACAGATAAGAACAAGGTCCT TCAACTTGAAGCCTGCTGTGGCTACGCGACCCAGCTTTCAGGGTCCAAGAACAAACTTGAAGCTTGCTGCCATCTTGGAGAAAGCAAATGCAATTCGCCA GGCTTTTGCTGGAAGTGATGAAGATGATGACACGGATAGTTGGAGTGACTCTTGAATTTCTAAACCGGTTAATGTTTTAAAATTCTGGTTCTCAATTTGA ACCGGGTTTCGAAAGTCATTCTTCCCTGTAAAGAATAGGAAAGCTCCCTGAAATATGGGATTCTTTATCCCACTTTGTTCATACATGATACTCTAAACTC CATCTAGCTACTCCTCTTAGTCAACCTTTTTTCAGATTCCACTTTAATATGTGCATGAACATTTGTTAAAAGCATGCGGTATGGCATCAATCCAGAACCA TTTTCTTAGGTGAAACTCACATAAGAAAGCTGAGACTCAGCGTGCAAGTGCTGTAACAGTCCAGATCCAACTTATCAATAAATAATCCCCCCCTTTCATA TGAGCATCTGTATATTTGTGTTGTCATGTAAGATTTTTTGGTTTACTATCCAATTTTGTAATTCTATGTAGTTTATGATGATAATAGATCAACTTTGTCT AGTAATATATATAAATATATACGTGTGTAACAGTCCAGATCCAACCTATCAATAAATAACCCCCCTCCCTTTCATATAAGATCCTGTATATTTGTGATGC CCTGTAATATTTTTTCTGTTTACTGACATGAGCATTCATTTTTTGGAATTCTATGTAGTTTGTAGTCATAATTGTA BLAST
Tissuepods
Gene nameLI_gene_184464; 
Additional informationdetails; 

Expression of Ll_transcript_289340

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_289340
BlastpProtein SCAR2 from Arabidopsis with 41.68% of identity
BlastxProtein SCAR2 from Arabidopsis with 62.31% of identity
EggnogNA(ENOG4111H25)
KeggLink to kegg annotations (AT2G38440)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019463768.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;