| Id Trinity | TRINITY_DN51375_c2_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_289341 |
| Sequence | TATTAACCAAATAAAATATAAACTCTCTCTCTCTCTTCCATGGTGGAACGAAGAGACAGAGTCACCGTAAGAAGAAGAAAATATCAAACAGCATTCGTGA AATAACAACTACTGTTTTCTCAATTCATTTCATTATTCTTCTTCTTCAAAAAATGCCGTTATCAAAGTACCACATAAGGAACGAGCACAGTTTAGCTGAT CCCGAATTGTACCGTTCAGCTGACAAAGATGATCCAGAAGCTCTTCTTGAAGCTGTTTCCATGGCAGCACTTGTTGGTCTCTTGCGCCAGCTCGGTGACC TTGCTGAGTTTGCTGCTGCCATCTTCCATAATCTGCATGAAGAGGTAATGGTTACTGCTGCAAGAGGCCACAGTCTTATGGGTCGTGTTCAACAGCTCGA GGCTGAAGTTCCTTCTCTTGAGAAGGCTTTTTACTCTCAAACTCATCATTCATCATTCTTTACTAATGGAGGGATTGGTTGGCATCGTAATCATCCATCA GAACAAAATCTTGTTACTCGTGGAGACTTACCTCGATTCGTAATGGATTCATATGAGGAATGCCGTGGACCCCCAAGACTGTTCCTTCTGGACAAGTTTG ATGTGGCTGGGGCTGGGGCATGTCTGAAACGTTTTACTGATCCGTCATTCTTTAAAATGGAGTCAGCTTCATTTGGTATATCGACAGTAGAAGCTCACAG GGAAAGAAGAATTCGCAAGGTCAAGAAGAAAGGAGCACGGTTGAGGGATGGTGAAGCCCCCATTGTACAATCACATTCAAAATTACATCAGCTGCTTCTT GAGGATCGTATTGAGAATGGCTATAATAATCCTGCGCGCCTTGTGAAGTTGAAGAAACGACAATTGAATGGACATTCAGCTGAAACAGAAGCTGAGAAGT GTTACATGGAGAAATTTTTGGAAACTCCCTCACCTGCCAATAAAATGATTTGTGAAACTTCACTCATTCCGCTACCTTTGAAATTGACGTTGGATGATAC TAGTGAAGCAGGGATTAGAATACTTGAATATCTCAAATCCCTTAATGAGGAGGAATTAGAACTAAAACCATTTTCAGAAGTGAATGGTGAGACATATGGA GATCTTCCGGAGGCAAAGGAACAAATCTCACTTGGTGTGACAGATGAAATGTCTTCTAGTGATCCTAAGTTGCCTCGTGAAAGAGAAGTGACAGTACATG ATCAAATGAAAATACAAGGCACCTTAGATGGGTATCATTCTGATGATGTGGCTAGTGAGGTTGACAGTTATATGGATGCTTTAGCAACCATGGAGTCAGA ATTGGAAACAGACAATGAGTGGAAACCCAAGAAAGGCTTCTTGAATATTCAAAAGGTAACAGATACAGATGGTAAAGAAGAACATCAACTACAAGCTCGA TTTTCAGATTCTCAATCATTTGGAGACTCCTCAACATCTGATGATATTAATTCATTCAAAGAAGATGGAAATGGAGAAAAGGTGCAAGCTCGGCTTTCAG ATTCTCACTCAACTGGAACCTCATCTACATCAGACAGTATTAGTTCAATCAGAAGAGATGGAAATGAACATGTAGAACTGCTAGCTCACTTTTCAGATTC TCAATCAGTTGGTAACTCCTCTACATCAGATGAGAATAATTCTTTCAAGAAAGATAAATCCTGTTTCACTCACTCTGCTTCATTAAGCACTGTTGTTGAA AATATACCATCAGAGTCTATATTATTCAGATATGCCAAGTATCACAAACCACAGGTTGAGAATACGTCATCCAACCAGATTCCACTAGTCGTTGAGTTTC AAAATACAGATTGTGGTAAGGTTGTCATGCATGATGATGCAAATGTTAAAGAAGAGAGTTCTGATTCTTGGCAAACCTCTTCAGATCTTGTGACTACAGG ACTTGATTTGTGTTCCGCCTCACCAGTGACCTTACCTGCAGGGACTCAATCAGATGAAATCCCACCTGACCCTGCTGAACTTAATTTAAGCTTAGAAGAT AATGAAGACAGAACAGATCTTGTTGAATCTATTTCTGCCAAACCTATTTCTCTCTCCCTAGTAAAAGATGATGCTTTCCCAGTGAATTCTTCCAATAAAA GATCTGTAGACAACTTGGAGGATGATGATCCATATGTGCATTCTGATGATTTGGAAGATCTGTCACTTGTTCATCCAGTGAATTGCTTTAATGGGGAGGT ATCTTCAGATTTAATTCTTGACAGTCCAAATGATGAACCATGCTCAGCAGAAATTCAAGTTTTGCATTCTGATCTGCAATCAAAGATGGTGCATAGTGAT AAAATACGTGAATCCACCTGCAGTGTTGATCCATTTGATGGTAATGGCTGTTTTAAAAACCAATCTTCTCCTGATAATCTTGTGATGGTGAATGATGTGG TAACTGAAAATATTCAGTCAGAAGATCAAGCTATTTTTACTGTTTCTTCTGTTGATAATGCTGAAAATGATGCTGGTATAATTACTTGTCCACCTTCAGG TCTGATCAATTCTCCATCAAGGAGTCTTTCAGATTTGCAAGAACCTCTTTCCGGTTCTTCAGATTCTTATAAGATGGCTATGGAATTGGCTCAAATTTCC ATGGACTTGAATAAAGAGAAGGGGGAGAATCCGTTGGAACCATCAACAGAGATAACATCATCTGATACCATATTTTCTCCCATGACTAATGTAACAAAGT CGGTAGAATCTTTTTCTTCTTTCGAAGATCTACATGAGAAAGAGATGGAAGTCAGTGAGGCAATTGGTGAACAATATTTTTCAGAATTAGAGGAACAAAA AATAATGGATAAACCCGAACTTGCTTGTGCCGATGTTCAATTGAACTTAAATAAACCAGTGCCGTGTGATCCTAATGATTCCGAAGGATGGAATAATATT CAAAATTCTGCTATTGAGCAATTCTCGCACGGTGCTTTTGTTGATGTGAAAATGTTGCCTGAATTTTCAAGGTTAGACACTCAGCAGTCAGAATCTATAT TTAATGACCGGAATGATCTTTTACAGAACGGGCAAGAAAATTATCCATCATCTTCCTGTAACCAGATGGAGTCAGAAACTGATGCTGAGCTATTCCTGGA ATCACAAATTGGGGAACAGGATACAGAATTTCTGCCCAGAGATGAAGAAAACTTCGCCTCTGAGAAATCTCAATCTCAACAGATGCAGAGATACCGATCA AAGCAAGAAAACGTTCATGCTACTTCTGAATTTGCTCCAGAAATATATGGAGATGGACCATCTTCATGTTATTCACCTGGCCAGGAGATTAATACAACCG AACATGTCATGGATCCATTGAAATATCCTCTTCCTGACTTCATTCCCAAGGCAACTGAAAATAATCTTGATGTGATACCGCCTATGCCCCCTCTACCTCC TATGCAATGGAGAATGGGCAAGCTTCAGCATGCCTCCCTCTTTTCTAAGGGAGAAGAGGTAGAAGTAAATTGGGACTCGGTCCAAGCAATGCAGCCAAGT AAACCTGATAAAAAATCCCAATCTGGTTTTCCAACTTCTGAGAGAGATAAGTTGCTGCATCAGAGTCCATTTTTGCCTGTCATGGCTGTGGGAAGTGATA ACCTCCAGCATTCTGGGTTTCCAGTGGGAGTTTCAGGGAATCCTGTTGCCATACCACTTAAATTACCAATCATGGTTAATGATGCAATTGGTCAATATAA TTACGTAGTGCTGGATAGAAACCAAATCCAGAACCCTTTCTTAACTTTACCTGTTGTATCTTCAGGTAGGCCTCCACATGATTACATTGTTGCTTCTGAG AGAGAAATGGTACAGAATTCAAAGCTATTCTCTTCTATACTACCTGCTGAATTTGCTGCTTCTGGACGTGATTTCATTTCTCCACCAGAAAATCTGTGTC ACCCTCCAAGTCAGTTCATGACCCAGATTAGTTCAGAAGTTAAAGCACCTCAACATTCTATAAGCAATGTAGTGTCTACAGGCAGGCCTCCAAATGGTTG TGATGGTGATTTCGAGGGAGAAATGCTACCGAGTTCAAACCAATACCTAAAAATACCACCTGCTGAATGTGCTGTTTTTGGACACGATTCCATTGCTCCA CAAGAAAATCTGATTCAATCTCCAAGTCAGTTAATGTCGGAGACTAGTTCAGTAGTTAAAACACATGAGCAGTCTATAAGTAATGTGGTATCTATGGGGA TGGCTCCACATGGTTATGCTGTTGCTTCTGAGGGAGAAATGGTACAGAATTCAAACCCATTGCCTCCAGTATCACCTGCTGAATGTTCTGTTTCTAGACA ATGTTCCACATCCCTACAAGAAAGTCCAACTCAACCTCCAAGTCAATTAATGACAGAGACCAGTTTAGAAGTTAAAACACTTCAGTCTATGAGTAATGCA GAAGGGGAACAAGGGCATCCTTTTATGTCACTCATGTCACCACCAAATATGGGAAGTATGGAGCCTAATCAGAGTTTTCTGCCTTCTATGGGGGAGATGC CATCGTACTTGGATATATATGCTCAAACATCAGATTTTGAGAGTGAAAGGATAAATGGAAAACCAAAGAATAAGCTTCCTCGTCCCCGGAATCCTCTAAT TGATGCGGTTGTTGCTCATGACAAAAGCAAGCTTAGGAAAGTTACTGAACGGGTTGTGCCTCAAATAGCCCCAAACGTAGAAGAAAGAGATTCGTTGTTA GAACAGATAAGAACAAGGTCCTTCAACTTGAAGCCTGCTGTGGCTACGCGACCCAGCTTTCAGGGTCCAAGAACAAACTTGAAGCTTGCTGCCATCTTGG AGAAAGCAAATGCAATTCGCCAGGCTTTTGCTGGAAGTGATGAAGATGATGACACGGATAGTTGGAGTGACTCTTGAATTTCTAAACCGGTTAATGTTTT AAAATTCTGGTTCTCAATTTGAACCGGGTTTCGAAAGTCATTCTTCCCTGTAAAGAATAGGAAAGCTCCCTGAAATATGGGATTCTTTATCCCACTTTGT TCATACATGATACTCTAAACTCCATCTAGCTACTCCTCTTAGTCAACCTTTTTTCAGATTCCACTTTAATATGTGCATGAACATTTGTTAAAAGCATGCG GTATGGCATCAATCCAGAACCATTTTCTTAGGTGAAACTCACATAAGAAAGCTGAGACTCAGCGTGCAAGTGCTGTAACAGTCCAGATCCAACTTATCAA TAAATAATCCCCCCCTTTCATATGAGCATCTGTATATTTGTGTTGTCATGTAAGATTTTTTGGTTTACTATCCAATTTTGTAATTCTATGTAGTTTATGA TGATAATAGATCAACTTTGTCTAGTAATATATATAAATATATACGTGTGTAACAGTCCAGATCCAACCTATCAATAAATAACCCCCCTCCCTTTCATATA AGATCCTGTATATTTGTGATGCCCTGTAATATTTTTTCTGTTTACTGACATGAGCATTCATTTTTTGGAATTCTATGTAGTTTGTAGTCATAATTGTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_184464; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289341
| Blastp | Protein SCAR2 from Arabidopsis with 41.16% of identity |
|---|---|
| Blastx | Protein SCAR2 from Arabidopsis with 61.15% of identity |
| Eggnog | NA(ENOG4111H25) |
| Kegg | Link to kegg annotations (AT2G38440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463768.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |