Ll_transcript_289348

• Id Trinity: TRINITY_DN51375_c2_g3_i6
• Name Transcript: Ll_transcript_289348
• Sequence: TATTAACCAAATAAAATATAAACTCTCTCTCTCTCTTCCATGGTGGAACGAAGAGACAGAGTCACCGTAAGAAGAAGAAAATATCAAACAGCATTCGTGA AATAACAACTACTGTTTTCTCAATTCATTTCATTATTCTTCTTCTTCAAAAAATGCCGTTATCAAAGTACCACATAAGGAACGAGCACAGTTTAGCTGAT CCCGAATTGTACCGTTCAGCTGACAAAGATGATCCAGAAGCTCTTCTTGAAGCTGTTTCCATGGCAGCACTTGTTGGTCTCTTGCGCCAGCTCGGTGACC TTGCTGAGTTTGCTGCTGCCATCTTCCATAATCTGCATGAAGAGGTAATGGTTACTGCTGCAAGAGGCCACAGTCTTATGGGTCGTGTTCAACAGCTCGA GGCTGAAGTTCCTTCTCTTGAGAAGGCTTTTTACTCTCAAACTCATCATTCATCATTCTTTACTAATGGAGGGATTGGTTGGCATCGTAATCATCCATCA GAACAAAATCTTGTTACTCGTGGAGACTTACCTCGATTCGTAATGGATTCATATGAGGAATGCCGTGGACCCCCAAGACTGTTCCTTCTGGACAAGTTTG ATGTGGCTGGGGCTGGGGCATGTCTGAAACGTTTTACTGATCCGTCATTCTTTAAAATGGAGTCAGCTTCATTTGGTATATCGACAGTAGAAGCTCACAG GGAAAGAAGAATTCGCAAGGTCAAGCAGAAGAAAGGAGCACGGTTGAGAGACGGTGAAGCTCACATTTTACTACCGCATTCAAAATTACATCAGCTGCTT CTTGAGGATCGTATTGAGAATGGCTATAGTAATCCTGCACGCCTTGTGAAGTTGAAGAAAAGACAATTGAATGGATTTTCAGCTGAAACGGCAGCTGGGA AGAGTTACATGGAGAAATTTCTTCAAACTCCCTCACCTGATCTTAAAATGATTTGTGAAACTTCGATCATTCCGCGACCTGTGAAACTGACATTGGATGA TACTAGTGAAGTGGGGATTAGAATACTTGAAATAAGTAGCATTAATCCTGTGAAAAAGTCATTTGGAAATCACATATCCCCGAATGAGGTGGAATTACAA CTAAAACCATTTTCAGAAGTGAATGGCGAGACATATGGAGCTCCCTCAGAGGCAAAAAAACTAAGCTCAGCTTGTGGGGCAGTTGAAATGTGTTCTATTG ACCCTAAGTTGCCCCGTGAAAGAGAATTGGCAGTCCATGAACAAAAGAAAATACAAGGCAGCTTAGATGGGTATCATTCTGAAGATGTGGCTAGCGAGGT TGACAATTATATGGATGTTTTAACTACCATTGAGTCAGAACTGGAAACAGACAATGAGTTTAAATCCAAGAAAGGTGTCTTGAATATTCAAATGGTAACA GATACAGATGGTAAAGAAGAGCATCAACTACAAGCTCGATTGTCAGATTCTCAATCATTTGGAGACTCCTCAACATCTGACGATATTAGTTCATTCAAAG AAGATAAAAATGGGGTGAAGGTTCAAGCTCGCCTTTCAGATTCTCACTCACCTGGAACCTCCTCTACATCAGACGATATTAGTTCATTCAGAAGAGATGG AAATAAGCATATAGAACTGCAAGCTCACTTTTCAGATTCCCAATCAGTTGATAACTCCTCTACATCAGATGAGAATATCTCTTTCAAGAAAGATAAATCC TGTTTCACTCACTCTGATTCATTAAGCACTGTAGTTGGGAATATACCATCAGAACCTATATTATTCAGATATGCCAAGTATCACGAACCTGAGGTCGAAG GTACATCATCCAACCAGATGCCCCGAATTGTTGAGCTTCAAAATACAGATAGTGGTAAGGTTGTCTTGCATGATGAGGCAAATGTTGAAGAGATTTCTGA TTTTGAGCAAGCCTCTTCTGATCTTGTGACTAGAGGACTTGATTTTAGTTCTGCCTCACCAGTGACCTTACCTGCAGAGACTCAATTAGATCAAACCTCA TCTGACCCAGCTGAACTTAATTTAAGATTAAAAGATAATGAAAACAGAACAGGTCTTGTTGAATCAATTGCTGTCAAACCTGTTTCTCTCTCCCTAGTAG AAGATGATGCTTGCCATGTGGGTTCTTTCGATAAAAAATCTCTAAATAATTTGGAGGATGACGAACATTGTATTCATTCTGATGATTTGTTACAAGTTTC TAATGATTTAGATTCAACTTGTGAAGATGATTGCATTGGGCATTCTGGTATCAAAATGTTGAATGCAGAATCTTCTAATGAAAATTCTTCTGAAATTTTG GTTAGTAGAGACGCTGTACAAGGAGTGAATCACATTTTCCCGTCTATGGAAAAATTAGACTTGAACTCAGGTACTATGTCGGTGCTTGATAGTCGAGACT CAAAGGATAAGGATTGTATAGTAGGAACTCAACTTAATTTGGAAGATTTGTCTCCTGTTCATCCAGTATGTTGCTTTACTGGGGAGGTATCTTCAGATTT AATTCATGACAGTCCACGTGATGAACCAAGCTCAGCAGAAATTGAAGTTTTGCATTCTGATTTGCAATCATCTTATTCATCTGGCCAAGTGATTAATCCA ACAAAAAATTTCATGGACCCACTGAAGTCTCCTCTTCCTGACCTCTTTCCTAAGGCAAATGAAAATAATCTTGATGAGATGCCACCTTTGCCCCCTCTAC CTCCTATGCAATGGAGAATGGGCAAGGTTCAACATGCTTCCCTCATTTCACAGAGAGAACATGTAGAAGTAAATTGGGCCTCATCCCAACCAATGCAGCC AATTAAACCTGATAAGAAATCTCAATCTGGTTTTCAAACTTCTGAGAAAGGTAAGTTGCTGCATCAGAATCCATGTTTGCCCATCATGGCTGTGGAAGGT GATAAGCTCCAATGTTCTTCTGGGTTTCCAGTGGGAGTTTCAGGGAATCCTGTTGCCATACCGTTTCAATTCCCAGTCATGGTTAATGATGCAAATGGTC TATATAACTATGTAGTGCTGGATAGAAACCAAATCCAGAACCCCTTCTTTGCTTTACCTGTGGTATCTTCAGAGAGGCCTCCACATAATTATATTGTTGC CTCTGAGGGAGAAATGCTACAGAATTCAAACCTATGCTCTCCTATACTTCCTGCTGAATCTGCTGTTTCTGGGCATGATTCCATCTCTCCACCAGGGAAC CTGAGTCAAATCACAGCAGAGACTAGTTCAGAAGTCAAAACACTCCAGCTGTCTGTAAGTAACCTAGAGTCTACAGGAAGCCCTCTGCATGGTTACGATG TTGCTCTTGAGGGAGAAATGCTGCGGAGTTCAAACCAATACCTAACAATAGCACCTGATGAATGTGCTGCTTCTGGACATGATTCCATTGCTCCACATGT AAAACCAACTCAATCTCCAAGTCAATTAATGGAGACTAGCTCAGAAGTTAAAACACTTGAGCACTCTGAACGTACTGTGGTATCTGTCGACATGGCTCCA CATAGTTATGCTGTTGCTTCTGAGGGAGAAATCCTACAGAACTCAAACCCATCGTCTCCCTTATCACCTGCCGAATGTACTGTTTCTGGACATGATTCCA TCTCTCTACAAGATAATACAGGTCAATTAATGACGGAGACTAGATCAGAAGTTAAAACATCTAATCAGTCTATGAGTAATGTGGAAGGTGAAAAGGGACA TCCTTTTATCTCATTCATGTTGCCACCAAACATGGAAAGTATGGAGCCTAATCAGAATTTTCTGTTTTCTGCGGGGGAGATGCCATCATCCTTTGATACA TATGCTCAAACATCAGATTTTGAGAGTGAAAGGATAAATGGAAAACCAAAGACTAGGCTACCTCGTCCTCGGAATCCTCTAATTGATGCTGTTGTTGCTC ATGATAAAAGCAAGCTTAGGAGGGTTACTGAACGGGTTATGCCTCTAATAGCACCAAACGTAGAAGAAAGAGATTCATTGTTAGAACAGATAAGAACAAA GTCCTTCAACTTGAAGCCTGCAGCGGCTACACGACCCAGCATTCAGGGTCCAAAGACAAACTTGAAGCTTGCCGCCATCTTGGAGAAAGCAAATGCTATC CGCCATGCTTTTGCTGGAAGTGATGAAGATGATGATGCGGATAGTTGGAGTGACTCTTGAATTTATCATTTTAAAGTGTTCTCAGCCAGTTAATATATTA AAACTTTGGTTCTCACCAAAACCAGGTCTAGAAGATATTCTTCCCTGTAAAGAATAGGAAAACTCCCTCAAATATCAGATTCTTTATCATAATCTAGCTC CTCCATAGTCCTCTTTCTTCACAATTCACACCTATATGCATGAACATTTGGTAAAAGCATGCAGTTCCGGTTGCATTTTCGACAAGCGATGTACCAGTCC AGATCCAACCTATGATAAGATATCATCCTCCCCTTTCCTATAAGCAACTGTATATTTGTGTTGTCCTGTGGTATTTTTTTGGTTTACTATCTTTAGAATT CATTTTAGTAATTCTATGTAGTTTTTTGATAATTGTACCATTTGTCTAGTAGTTCAACTGTGCCAAGTGCAGTGATATATATACGTGTAAAATCCTTTCA GTGTATACTTTCTATCATTACGCTTGTTCAGTGATCTAACTACCAAGAGTATGGTTAGAAATTCATACTAGAATCTGGTCCCAATGTGCAAATTTATTAT TTTC
• Tissue: pods
• Gene name: LI_gene_184464;
• Additional information: details;

Expression of Ll_transcript_289348

FPKM

• PAB: 1.5
• PNAB: 2.6
• PS1: 3.9
• PS2: 2.4
• PS3: 3.7
• PW1: 3.9
• PW2: 3.7
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289348

• Blastp: Protein SCAR2 from Arabidopsis with 49.29% of identity
• Blastx: Protein SCAR2 from Arabidopsis with 49.29% of identity
• Eggnog: NA(ENOG4111H25)
• Kegg: Link to kegg annotations (AT2G38440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446605.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;