Ll_transcript_289180

• Id Trinity: TRINITY_DN51379_c0_g1_i14
• Name Transcript: Ll_transcript_289180
• Sequence: CTCCATTTTCTCTCTCTCTCATTTCAATTTCTCCATTTTCTCTCTCTCTCAAACTTCATCTAGTAGAAGAAACAAAACAAGCTCAAAACTGCTTCAATTC TCGTCACTCTTCACGTTTTTGCGATGCACCGCGTGGTTAGTGCGGGTAACACAAGCAACAACAATTCAACTCGCCCTCGTAAGGAGAAGAGGTTAACATA CATTTTGAATGATCCTGATGACACAAAGCATTGTGCAGGCATAAATGGTTTGGCTGTACTTAAGTATGCAGTATCTGATGGGTCTGATTATCTCTTCACT GGGAGCCGTGATGGCAAGCTAAAGCGTTGGGCACTAGCTGACGATGTAGCAACATGCTCTGCAACCTTTGAGTCTCATGTGAATTGGGTTAATGATGCTG TTATTGTTGGTGATAATACACTTGTTTCGTGTTCTTCAGATACGACCGTTAAGACATGGAATGCTTTGTCGAATGGAACATGTACTAGGACGCTCCACCA ACACTCTGATTATGTTACTTGTCTCGCAGCAGCAGGAAAAAATTGTATATGCATTTTAGAGCAATATTGTCGCCTCTGGTGGCCTTGGCGGGGAGGTTTT TATATGGGATGTTGATGCTGCGCTTGCTCCGGTTTCTAAGTGTAATGATGCTACGGTTGATGATTCTTCGAATGGTACGAAGGGTTCTGGCAACTTACAT ACTGTCGGTTCAAGCAGCAATATATGTGTGCACACTACTCAAACAGAAGGTTACATTCCAATTGCTGCCAAAGGTCATAAGGAGTCGGTTTATGCATTGG CAATTAATGAAGGTGGGACAGTTCTTGTCTCTGGTGGCACAGAAAAGGTTGTGCGTGTCTGGGACACTAGATCTGGATCGAAGACTCTGAAGCTAAAAGG GCATACAGAGAACATCAGGGCGCTGCTGCTGGATTCTACTGGAAGGTATTGTTTATCCGGATCTTCGGACTCCATGATAAGGCTGTGGGATATCGGTCAG CAGAGATGTGTGCATTCTTATGCAGTTCATACAGATTCTGTATGGGCGCTTGCCAGCACCCCATCATTTAGTCATGTTTATAGTGGTGGGAGAGACTTTT CACTATACTTGACAGACCTGCAAACGAGAGAGAGTAGTTTGCTTTGCACTGGCGAGCACCCTATTGTTAAATTGGCTTTACATGATGATAGCATATGGGT TGCGTCAACAGATTCTTCAGTTCACAGATGGCCTGCTGAAGGATACAATCCTCAGAAGATTTTCCAAAGAGGCAATTCTTTTATAGCCGGAAACTTGTCT TTTTCAAGAGCAAGGGTGTCGGTGGAAGGATCTAGTCCTGTTCCTGTATATAAAGAACCTACCTTGACTATCGCGGGCATCCCTGCAATAATGAAATATG AAGTTTTAAATAATAAGAGACATGTATTGACGAAGGATACTTCTGGTTCAGTGAAGCTGTGGGAGATCACTAAAGGTGTCGTAGTTGAAGATTATGGAAA GGTTTCATTTGAGGAGAAAAAGGAAGAGCTCTTTGAGATGGTTAGCATTGGCACATGGTTCTCTGTGGATACCAGGCTTGGAAGTTTGTCTATCCATTTG GACACTCCCCAATGCTTTTGTGCAGAGATGTATTCAGCAGAGCTTAACATTGCAGGCAAGCCTGAAGATGATAAGGTTAATTTGGGTTTGGAAACCCTTA AAGGGATCTTCACTCATTGGTTGATAAAAAGAAAGCAAAGAATGGGATCCCCAGCTCCAGCTAATGGGGAATTGTTATCTGGAAAGGATATTGCTGCTAG AAGTCTTGCCCATTCAAGAACTGCCGTTGATGGTATTTCTGAGAATGACGTTATGGTTTATCCTCCGTTTGAATTTCCAGTCACTTCCCTTCCTTCCATT ATTACGGAGGGCACTGAAGGAGGTCAATGGAGAAAAAGAGTTGCAGATTTAGATGGAACTGAGGATGAGAAAGACTTCCCCGGATGGTGTCTGGACTGCC TTTTGAATAACCGGTTACCTTCCAGAGAAGCCACTAAATGCAGTTTCTATTTGCATCCATGTGAAGGCTCTACAGTCCAGATCCTCACACAAGGCAAGCT AAGTGCCCCACGTATATTAAGAACTCACAAGGTTATTAATTATGTAGTAGAAAAGATGGTGCTTGACAAACCTCTGGATAGTGTAGCCAATGGAGGTTTT GCCCCTGTACTTGGTGCATCACAGTTACAGCATCAAGTAGTTGGGGATGGATCTTTCCAATCGGGATTTAAGTCTTGGCAAAAGCGTAAACCTTCTATTG AAATATTGTGCAACAATCAGGTTTTGCCTCCTGATATGAGCTTAGCCACAGTGAAAACTTATATATGGAAGAAAAATGAAGACCTGGTTCTACATTACAG AGTGGTTCAAGGCAGGTGACTACAAATTGCATATGCATCAGAGGATACTTCTGAGCATTTAATCTTCTTGGGTTGCCTGCATTCAACGGTGGCGCCGTAA GATTTCTGTAAATTCCGAGCTCTCATTTACCATGAATTTTTTCTCCAGACTTGCTTGGACAGTTTTTTTTCCCTATAGAAGAGAGCTGTTACTATAAATT TTGAATAAT
• Tissue: pods
• Gene name: LI_gene_184498;
• Additional information: details;

Expression of Ll_transcript_289180

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 2
• PS2: 0.5
• PS3: 0.4
• PW1: 0.7
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289180

• Blastp: WD repeat-containing protein 48 from Gallus with 33.54% of identity
• Blastx: WD repeat-containing protein 48 from Gallus with 35.17% of identity
• Eggnog: WD repeat domain 48(ENOG410XRJ5)
• Kegg: Link to kegg annotations (420427)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419683.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;