| Id Trinity | TRINITY_DN51379_c0_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_289183 |
| Sequence | CTCCATTTTCTCTCTCTCTCATTTCAATTTCTCCATTTTCTCTCTCTCTCAAACTTCATCTAGTAGAAGAAACAAAACAAGCTCAAAACTGCTTCAATTC TCGTCACTCTTCACGTTTTTGCGATGCACCGCGTGGTTAGTGCGGGTAACACAAGCAACAACAATTCAACTCGCCCTCGTAAGGAGAAGAGGTTAACATA CATTTTGAATGATCCTGATGACACAAAGCATTGTGCAGGCATAAATGGTTTGGCTGTACTTAAGTATGCAGTATCTGATGGGTCTGATTATCTCTTCACT GGGAGCCGTGATGGCAAGCTAAAGCGTTGGGCACTAGCTGACGATGTAGCAACATGCTCTGCAACCTTTGAGTCTCATGTGAATTGGGTTAATGATGCTG TTATTGTTGGTGATAATACACTTGTTTCGTGTTCTTCAGATACGACCGTTAAGACATGGAATGCTTTGTCGAATGGAACATGTACTAGGACGCTCCACCA ACACTCTGATTATGTTACTTGTCTCGCAGCAGCAGGAAAAAATAGCAATATTGTCGCCTCTGGTGGCCTTGGCGGGGAGGTTTTTATATGGGATGTTGAT GCTGCGCTTGCTCCGGTTTCTAAGTGTAATGATGCTACGGTTGATGATTCTTCGAATGGTACGAAGGGTTCTGGCAACTTACATACTGTCGGTTCAAGCA GCAATATATGTGTGCACACTACTCAAACAGAAGGTTACATTCCAATTGCTGCCAAAGGTCATAAGGAGTCGGTTTATGCATTGGCAATTAATGAAGGTGG GACAGTTCTTGTCTCTGGTGGCACAGAAAAGGTTGTGCGTGTCTGGGACACTAGATCTGGATCGAAGACTCTGAAGCTAAAAGGGCATACAGAGAACATC AGGGCGCTGCTGCTGGATTCTACTGGAAGGTATTGTTTATCCGGATCTTCGGACTCCATGATAAGGCTGTGGGATATCGGTCAGCAGAGATGTGTGCATT CTTATGCAGTTCATACAGATTCTGTATGGGCGCTTGCCAGCACCCCATCATTTAGTCATGTTTATAGTGGTGGGAGAGACTTTTCACTATACTTGACAGA CCTGCAAACGAGAGAGAGTAGTTTGCTTTGCACTGGCGAGCACCCTATTGTTAAATTGGCTTTACATGATGATAGCATATGGGTTGCGTCAACAGATTCT TCAGTTCACAGATGGCCTGCTGAAGGATACAATCCTCAGAAGATTTTCCAAAGAGGCAATTCTTTTATAGCCGGAAACTTGTCTTTTTCAAGAGCAAGGG TGTCGGTGGAAGGATCTAGTCCTGTTCCTGTATATAAAGAACCTACCTTGACTATCGCGGGCATCCCTGCAATAATGAAATATGAAGTTTTAAATAATAA GAGACATGTATTGACGAAGGATACTTCTGGTTCAGTGAAGCTGTGGGAGATCACTAAAGGTGTCGTAGTTGAAGATTATGGAAAGGTTTCATTTGAGGAG AAAAAGGAAGAGCTCTTTGAGATGGTTAGCATTGGCACATGGTTCTCTGTGGATACCAGGCTTGGAAGTTTGTCTATCCATTTGGACACTCCCCAATGCT TTTGTGCAGAGATGTATTCAGCAGAGCTTAACATTGCAGGCAAGCCTGAAGATGATAAGGTTAATTTGGGTTTGGAAACCCTTAAAGGGATCTTCACTCA TTGGTTGATAAAAAGAAAGCAAAGAATGGGATCCCCAGCTCCAGCTAATGGGGAATTGTTATCTGGAAAGGATATTGCTGCTAGAAGTCTTGCCCATTCA AGAACTGCCGTTGATGGTATTTCTGAGAATGACGTTATGGTTTATCCTCCGTTTGAATTTCCAGTCACTTCCCTTCCTTCCATTATTACGGAGGGCACTG AAGGAGGTCAATGGAGAAAAAGAGTTGCAGATTTAGATGGAACTGAGGATGAGAAAGACTTCCCCGGATGGTGTCTGGACTGCCTTTTGAATAACCGGTT ACCTTCCAGAGAAGCCACTAAATGCAGTTTCTATTTGCATCCATGTGAAGGCTCTACAGTCCAGATCCTCACACAAGGCAAGCTAAGTGCCCCACGTATA TTAAGAACTCACAAGGTTATTAATTATGTAGTAGAAAAGATGGTGCTTGACAAACCTCTGGATAGTGTAGCCAATGGAGGTTTTGCCCCTGTACTTGGTG CATCACAGTTACAGCATCAAGTAGTTGGGGATGGATCTTTCCAATCGGGATTTAAGTCTTGGCAAAAGCGTAAACCTTCTATTGAAATATTGTGCAACAA TCAGGTTTTGCCTCCTGATATGAGCTTAGCCACAGTGAAAACTTATATATGGAAGAAAAATGAAGACCTGGTTCTACATTACAGAGTGGTTCAAGGCAGG TGACTACAAATTGCATATGCATCAGAGGTGGGTTATCCTGATCTTTTCGTAGACTTTCTCGGCTACACTATGATACTAACCTTTCATTTTTCCAGTAATT AATTTGTGTTAATTTTCTGTATGATATTCGGCACTGAATTTATCCCCTCCTTCCTGTGTCCAGTACTTTACTTATTCTCGGGTGTGCAAGGGGAGCACAT GTCCTTTATTATGATTAGTTAAAAATGTATTTAAGTCAAAAGTTTATCGGTTAGGTTTTTTTCCTGACCAATCAAAGTAATACACTTTTGTGGTACAATA GATATACTCCCGTGCAAAAATATATTACTTTTTGTTGTCTCGGCATGGTTTGCAGACTTCATTTATATTAATACTTGCAGGTTTTCTGATGATTGTGTAG GATACTTCTGAGCATTTAATCTTCTTGGGTTGCCTGCATTCAACGGTGGCGCCGTAAGATTTCTGTAAATTCCGAGCTCTCATTTACCATGAATTTTTTC TCCAGACTTGCTTGGACAGTTTTTTTTCCCTATAGAAGAGAGCTGTTACTATAAATTTTGAATAATTATCTAGCTGGTGTGCATACTTTTACTTGATATG ATGGAGTCATTGATGTTCTGCATCTAGAAATTGACTGTTGAGAATTAGTGGGGATCATAATATTGGGGTGTTCTTCATGAACCTGTGAGTTAATTTAGAG ATGACAAAGAAAATATTGTACATTTGAATTTGAATTGTGAGTTAAATAAATACATAGCCATTGAATTATTTAACCATTAGTAATGACATTATTCGATTCA TGTAGCCGACCACATCTAGTGGAACTAAGACGTGAATGTTGGTTGTATTTAATCATTGGCAATATTATTCTCATTTTTTTTTCAAATTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_184498; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289183
| Blastp | WD repeat-containing protein 48 from Gallus with 35.32% of identity |
|---|---|
| Blastx | WD repeat-containing protein 48 from Gallus with 35.15% of identity |
| Eggnog | WD repeat domain 48(ENOG410XRJ5) |
| Kegg | Link to kegg annotations (420427) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419683.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |