Id Trinity | TRINITY_DN51379_c0_g1_i2 |
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Name Transcript | Ll_transcript_289168 |
Sequence | TTCCAGAATTCGTAACTGCCTCTTATAACAAGTATTATTCTCGTAAATCGAACTTTCGACTCGTAGACCAACACCCTAATTTAAGTCACTAAATAAAAAC CCAAGACCCTAATTTAAAGAAAAAAAGAACAAAATGGGTCAACGGATCTACCAGAATAAAATCCAACGCCCATATTTACATTACAATACATCACATCCAT CTTCATTTTCTCTCTCTCTCTCTCAAACTTGGGTAGTAGAAGAACAAATTAACAAGCACAAAACTGCTTCTATTCAATTCTCTTCACTCTTCACGTTTCC GCGATGCACCGCGTGGCTAGTGTGGGTAACACAAACAACAATTCAAACCGCCCTCGTAAGGAGAAGAGGTTAACATATGTTTTGAATGATTCTGATGACA CAAAGGTGAACTCGTTATTTCTTTGTTTTTTTATTTTCGCCATAAAAACAGGCAACTTTCATGGTTGCTTCTTGTTATTGAATGCTTTCCCCCTCAGACA TTTTGACATTTTGCATCTAAACCTGCCAACTCGTTGCGACCTATTGGGTTCTTAATGTTAGATTTAGACTCTGGTTATTCTCTCTTTAAATTTAGAGTTA GACTCTGGTTGTTTGCATATTTCCCCTTTTATTTTTTCATATTTATCCACTATTCTACCTTCTAACCAATCGAAGCTTCATCAATAGTTTGTAGGACACT ATGATACCTGACTCTTTTCGCCTCTGTACTTAGAGTTTTGCTTCAAGGTGTCATGTCATAGATTCTATATTTGCATCAATATTAGTTGTTTTGGTTGAAA TTCTTTCAATTTTGAAAGTTTTCTCAGAGCATCTCCAACAATGCAACTCTCTTGAGTTGGCATCGTTGGGCACTACCATGCAACTTCTGTTTCTCTTTAC TTTATGCAACTCTCCACGAGGCCACTCCAACCACACAACTCTTAAAATGTCATTAGACTTACCTTACAAGTTATCCAACATATTTATACTTTATTCACTT TTATTTCTTTCAACTTAAAGTATTAAGCATTAACACATTTCTATAATTAAGTTTGTTGGGCCCATATTAAATCTATGCTGCTGTTGCATACACCTTAACA TGGTTTTTGTTTCTCTAATAACCATGCAACTCTTTTGTAACAATTGTAAAAAGATCTATGCAACCCCCATTGGAGATGCTTTTACTGCTCTGTGTCTGTC AATATTTTAATTTGACAGTGGGTTCTTTTCTGCAGCATTGTGCAGGCATAAATGGTTTGGCTGTACTTAAGTATGCAGTATCTGATGGGTCTGATTATCT CTTTACTGGGAGCCGTGATGGCAGGCTAAAACGATGGGCACTATCTGAGGATGCAGCAACATGCTCTGCTACCTTTGAATCTCATGTGGATTGGGTTAAT GATGCAGTTATTGTTGGTGATAATACACTTGTTTCATGTTCTTCAGATACGACCCTTAAGACATGGAATGCTTTGTCCAATGGAACTTGTACTAGGACGC TTCACCAACATTCTGATTATGTTACTTGCCTTGCAGCAGCGGGAAAAAATAGCAATATTGTTGCCTCTGGTGGCCTTGGTGGAGAGGTCTTTATATGGGA TCTTGATGCTGCACTTGCTCCGGTCTCTAAGTTTAGTGATACTATGGTTGATGATTCGTCAAATGGTATGAAGGGTTCTGGCAACTTACGCACCGTTGGC TCAAACAACAATATATCTGTGCAGACTACTCAAACAGAAGGGTATATTCCAATTTCTGCCAAAGGCCACAAGGAGTCGGTTTATGCATTGGCAATGAATG AAGGTGGAACAATGCTTGTCTCTGGTGGCACAGAAAAGGTTGTGCGTGTCTGGGACACAAGATCTGGATCAAAGACTCTGAAGCTAAAAGGGCATACAGA TAACATCAGGGCTCTGCTTTTGGATTCCACTGGCAGGTTTGTGGATATCTAAGTATAACATTTTTCTGACAAGTGAGCTGTGATATTTTTAACATTCATT AGCGCAGGTATTGTTTATCAGGATCTTCAGACTCTATGATAAGGCTTTGGGATATAGGTCAGCAGAGGTGTGTGCATTCTTATGCAGTTCATACAGATTC TGTTTGGGCACTTGCCAGCACCCCAACATTTAGTCACGTTTATAGTGGTGGAAGAGACTTTTCATTATACTTGACAGATCTGCAAACGAGAGAGAGTAGT TTGCTTTGCACAGGCGAGCACCCTATTGTTCAATTGGCTTTACATGATGATAGCATATGGGTTGCGTCAACAGATTCTTCAGTTCACAGATGGCCCGCTG AAGGATACAACCCTCAAAAGATTTTCCAAAGAGGCAATTCTTTTTTAGCTGGAAACTTGTCCTTTTCAAGAGCAAGGGTTTCAATGGAAGGATCTACTCC TGTTCCTGTATATAAAGAACCTACCTTAACCATCTCGGGCACCCCTGCAATAGTTCAACATGAAGTTTTAAACAATAAGAGACATGTACTAACGAAGGAT ACTTCTGGTTCAGTGAAGCTGTGGGAGATCACTAAAGGTGCTGCAGTTGAAGATTATGGAAAGGTTTCGTTTGAGGAGAAAAAGGAAGAGCTATTTGAAA TGGTATGATTACTGCTTTACATCATGAATTTCTTTTTCAGAAATACTTCCTATCTGGTAACATAACATCAATGATTTATAGTAGTTCAGTAGCTCTGCCT AGCTTTTATTTTCTTTAAATGCGGCCCATGCTGCCTCAGGTTAGCATTGGCACATGGTTCTCTGTGGATACCAGGCTTGGAACTTTGTCTGTCCATTTGG ACACTCCCCAGTGCTTTTATGCAGAGATGTACTCAGCGGAGCTTAACATTGCAGGCAAGCCTGAAGATGATAAGGTTAATTTGGGCTGGGAAACCCTTAA AGGGCTCTTGGCTCATTGGTTGATAAAACGAAAACAGAGAATAGGATCCCCAGCTCCAGCTAATTCAGAATTGTTATCCGGAAAGGATATTGCTGCTAGA AGTTTTGCCCATTCAAGAATTGATGTTGATGGTAATTCTGAGAATGATGTTATGGTTTATCCACCTTTTGAATTCCCAGCAGTTTCCATTCCTTCCATCA TCACGGAGGGCACTGAAGGAGGTCCATGGAGAAAAAGAGTTACAGATTTAGATGGAACTGAGGATGAGAAAGACTTCCCCGGGTGGTGTTTGGACTGCCT TTTGAATAACCGGTTACCTTCCAGAGAAGCTACAAAATGCAGTTTCTATTTGCACCCATGTGAAGGATCTACAGTCCAGATCCTCACACAAGGGAAGCTA AGTGCCCCGCGTATATTAAGAATTCACAAGGTTATTAATTATGTAGTAGAAAAGATGGTGCTTGACAAACCTTTGGATAGTGTAGCCGATGGAAGTTTTT CCCCTGCAATTGCTGGATCACAGTTACAACTTCAAGCAGTTGGGGATGGATCTTTCCGATCTGGATTTAAATCTTGGCAAAAGCTTAGACCTTCTATTGA AATATTGTGCA BLAST |
Tissue | pods |
Gene name | LI_gene_184498; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289168
Blastp | WD repeat-containing protein 48 from Macaca with 39.57% of identity |
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Blastx | WD repeat-containing protein 48 from Silurana with 42.13% of identity |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000363) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440511.1) |
Pfam | WD domain, G-beta repeat (PF00400.31) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |