Ll_transcript_289186

• Id Trinity: TRINITY_DN51379_c0_g1_i20
• Name Transcript: Ll_transcript_289186
• Sequence: TTCCAGAATTCGTAACTGCCTCTTATAACAAGTATTATTCTCGTAAATCGAACTTTCGACTCGTAGACCAACACCCTAATTTAAGTCACTAAATAAAAAC CCAAGACCCTAATTTAAAGAAAAAAAGAACAAAATGGGTCAACGGATCTACCAGAATAAAATCCAACGCCCATATTTACATTACAATACATCACATCCAT CTTCATTTTCTCTCTCTCTCTCTCAAACTTGGGTAGTAGAAGAACAAATTAACAAGCACAAAACTGCTTCTATTCAATTCTCTTCACTCTTCACGTTTCC GCGATGCACCGCGTGGCTAGTGTGGGTAACACAAACAACAATTCAAACCGCCCTCGTAAGGAGAAGAGGTTAACATATGTTTTGAATGATTCTGATGACA CAAAGCATTGTGCAGGCATAAATGGTTTGGCTGTACTTAAGTATGCAGTATCTGATGGGTCTGATTATCTCTTTACTGGGAGCCGTGATGGCAGGCTAAA ACGATGGGCACTATCTGAGGATGCAGCAACATGCTCTGCTACCTTTGAATCTCATGTGGATTGGGTTAATGATGCAGTTATTGTTGGTGATAATACACTT GTTTCATGTTCTTCAGATACGACCCTTAAGACATGGAATGCTTTGTCCAATGGAACTTGTACTAGGACGCTTCACCAACATTCTGATTATGTTACTTGCC TTGCAGCAGCGGGAAAAAATAGCAATATTGTTGCCTCTGGTGGCCTTGGTGGAGAGGTCTTTATATGGGATCTTGATGCTGCACTTGCTCCGGTCTCTAA GTTTAGTGATACTATGGTTGATGATTCGTCAAATGGTATGAAGGGTTCTGGCAACTTACGCACCGTTGGCTCAAACAACAATATATCTGTGCAGACTACT CAAACAGAAGGGTATATTCCAATTTCTGCCAAAGGCCACAAGGAGTCGGTTTATGCATTGGCAATGAATGAAGGTGGAACAATGCTTGTCTCTGGTGGCA CAGAAAAGGTTGTGCGTGTCTGGGACACAAGATCTGGATCAAAGACTCTGAAGCTAAAAGGGCATACAGATAACATCAGGGCTCTGCTTTTGGATTCCAC TGGCAGGTATTGTTTATCAGGATCTTCAGACTCTATGATAAGGCTTTGGGATATAGGTCAGCAGAGGTGTGTGCATTCTTATGCAGTTCATACAGATTCT GTTTGGGCACTTGCCAGCACCCCAACATTTAGTCACGTTTATAGTGGTGGAAGAGACTTTTCATTATACTTGACAGATCTGCAAACGAGAGAGAGTAGTT TGCTTTGCACAGGCGAGCACCCTATTGTTCAATTGGCTTTACATGATGATAGCATATGGGTTGCGTCAACAGATTCTTCAGTTCACAGATGGCCCGCTGA AGGATACAACCCTCAAAAGATTTTCCAAAGAGGCAATTCTTTTTTAGCTGGAAACTTGTCCTTTTCAAGAGCAAGGGTTTCAATGGAAGGATCTACTCCT GTTCCTGTATATAAAGAACCTACCTTAACCATCTCGGGCACCCCTGCAATAGTTCAACATGAAGTTTTAAACAATAAGAGACATGTACTAACGAAGGATA CTTCTGGTTCAGTGAAGCTGTGGGAGATCACTAAAGGTGCTGCAGTTGAAGATTATGGAAAGGTTTCGTTTGAGGAGAAAAAGGAAGAGCTATTTGAAAT GGTTAGCATTGGCACATGGTTCTCTGTGGATACCAGGCTTGGAACTTTGTCTGTCCATTTGGACACTCCCCAGTGCTTTTATGCAGAGATGTACTCAGCG GAGCTTAACATTGCAGGCAAGCCTGAAGATGATAAGGTTAATTTGGGCTGGGAAACCCTTAAAGGGCTCTTGGCTCATTGGTTGATAAAACGAAAACAGA GAATAGGATCCCCAGCTCCAGCTAATTCAGAATTGTTATCCGGAAAGGATATTGCTGCTAGAAGTTTTGCCCATTCAAGAATTGATGTTGATGGTAATTC TGAGAATGATGTTATGGTTTATCCACCTTTTGAATTCCCAGCAGTTTCCATTCCTTCCATCATCACGGAGGGCACTGAAGGAGGTCCATGGAGAAAAAGA GTTACAGATTTAGATGGAACTGAGGATGAGAAAGACTTCCCCGGGTGGTGTTTGGACTGCCTTTTGAATAACCGGTTACCTTCCAGAGAAGCTACAAAAT GCAGTTTCTATTTGCACCCATGTGAAGGATCTACAGTCCAGATCCTCACACAAGGGAAGCTAAGTGCCCCGCGTATATTAAGAATTCACAAGGTTATTAA TTATGTAGTAGAAAAGATGGTGCTTGACAAACCTTTGGATAGTGTAGCCGATGGAAGTTTTTCCCCTGCAATTGCTGGATCACAGTTACAACTTCAAGCA GTTGGGGATGGATCTTTCCGATCTGGATTTAAATCTTGGCAAAAGCTTAGACCTTCTATTGAAATATTGTGCAACAATCAGGCAAGTTACATGTTCTTTT CAATGCTGTGTTATGACATTATTTATAACGATTTCCTTCTAGATGCTGATAGTTGTCCTGCTCTTCAATATATGCTCATGCCTTCTCGTATCCTTTTTTG CTAACCTGATTGACATTGTTGGTTTCTGTTGCCGTATTTTCTGTAAATCATTGAGGTCATCATGTATCCTTAGGATTATGTTCTTCCTACTGCATTTTCG ATTATGTTTGCATTTGCAAGGTCACAGCTTAGATTTACATCTAGAGTCAATGGAGTCAATGGTCAAAATCTTGGTCTGTAGCTTTAAATGTGGTTTAAAT GTTTTTGGTCTACTTATCCTGAAAATCAGTTCAATGTACAATTGTTCCGTATACCTATAATACCTTGACTTGAAACAATTGGTTCAAAAACTTATCTTCA ACTCAAACAACAATTATTAGTCATCTTGTAGTATGAGCAGATAATGAGACCTTAAAAGGATCATATCTTCAGACTTCAATGCTTAATCGTCTTAAAATAG GTGATAGTAACTGTGTTCTATCTGCAGTTATAATTGTTCTGTTCTCCCAAATTTGTTTTCATTTTTTTGTTTCGTGTAGTTTTTCAATTTATATCCTATG ATTATTTTGAGGATGGCAGTTCCTTTTTTCTTTAAAAAATATATTGTTTGATCTAAATTAAGAAGGAT
• Tissue: pods
• Gene name: LI_gene_184498;
• Additional information: details;

Expression of Ll_transcript_289186

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 0.2
• PS2: 0.1
• PS3: 0.3
• PW1: 0.3
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289186

• Blastp: WD repeat-containing protein 48 from Silurana with 34.38% of identity
• Blastx: WD repeat-containing protein 48 from Silurana with 33.96% of identity
• Eggnog: WD repeat domain 48(ENOG410XRJ5)
• Kegg: Link to kegg annotations (780319)
• CantataDB: Link to cantataDB annotations (CNT0000363)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440510.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;