Ll_transcript_289169

• Id Trinity: TRINITY_DN51379_c0_g1_i3
• Name Transcript: Ll_transcript_289169
• Sequence: TTCCAGAATTCGTAACTGCCTCTTATAACAAGTATTATTCTCGTAAATCGAACTTTCGACTCGTAGACCAACACCCTAATTTAAGTCACTAAATAAAAAC CCAAGACCCTAATTTAAAGAAAAAAAGAACAAAATGGGTCAACGGATCTACCAGAATAAAATCCAACGCCCATATTTACATTACAATACATCACATCCAT CTTCATTTTCTCTCTCTCTCTCTCAAACTTGGGTAGTAGAAGAACAAATTAACAAGCACAAAACTGCTTCTATTCAATTCTCTTCACTCTTCACGTTTCC GCGATGCACCGCGTGGCTAGTGTGGGTAACACAAACAACAATTCAAACCGCCCTCGTAAGGAGAAGAGGTTAACATATGTTTTGAATGATTCTGATGACA CAAAGCATTGTGCAGGCATAAATGGTTTGGCTGTACTTAAGTATGCAGTATCTGATGGGTCTGATTATCTCTTTACTGGGAGCCGTGATGGCAGGCTAAA ACGATGGGCACTATCTGAGGATGCAGCAACATGCTCTGCTACCTTTGAATCTCATGTGGATTGGGTTAATGATGCAGTTATTGTTGGTGATAATACACTT GTTTCATGTTCTTCAGATACGACCCTTAAGACATGGAATGCTTTGTCCAATGGAACTTGTACTAGGACGCTTCACCAACATTCTGATTATGTTACTTGCC TTGCAGCAGCGGGAAAAAATAGCAATATTGTTGCCTCTGGTGGCCTTGGTGGAGAGGTCTTTATATGGGATCTTGATGCTGCACTTGCTCCGGTCTCTAA GTTTAGTGATACTATGGTTGATGATTCGTCAAATGGTATGAAGGGTTCTGGCAACTTACGCACCGTTGGCTCAAACAACAATATATCTGTGCAGACTACT CAAACAGAAGGGTATATTCCAATTTCTGCCAAAGGCCACAAGGAGTCGGTTTATGCATTGGCAATGAATGAAGGTGGAACAATGCTTGTCTCTGGTGGCA CAGAAAAGGTTGTGCGTGTCTGGGACACAAGATCTGGATCAAAGACTCTGAAGCTAAAAGGGCATACAGATAACATCAGGGCTCTGCTTTTGGATTCCAC TGGCAGGTTTGTGGATATCTAAGTATAACATTTTTCTGACAAGTGAGCTGTGATATTTTTAACATTCATTAGCGCAGGTATTGTTTATCAGGATCTTCAG ACTCTATGATAAGGCTTTGGGATATAGGTCAGCAGAGGTGTGTGCATTCTTATGCAGTTCATACAGATTCTGTTTGGGCACTTGCCAGCACCCCAACATT TAGTCACGTTTATAGTGGTGGAAGAGACTTTTCAGTGAGTTTGACTTTCCATTAAAAGTTACAATGATAATATGTTTTTAATTATTATCTCCATGTTCTG TTTAACTTGTGAAACTCGTTTTTATAATCTCTATTCTTTTATTTCCTAAGTTATACTTGACAGATCTGCAAACGAGAGAGAGTAGTTTGCTTTGCACAGG CGAGCACCCTATTGTTCAATTGGCTTTACATGATGATAGCATATGGGTTGCGTCAACAGATTCTTCAGTTCACAGATGGCCCGCTGAAGGATACAACCCT CAAAAGATTTTCCAAAGAGGCAATTCTTTTTTAGCTGGAAACTTGTCCTTTTCAAGAGCAAGGGTTTCAATGGAAGGATCTACTCCTGTATGTTACATTT ATTTCTGAAAAAAACCATCACATTACTTTGCTGGAAAAATCTACCCTTGTATGTTAGATATAAATGACATTTCTGAAGGCATGGTGTATGATAGAACACA ATGGCATTGTTTAATCCACGTATGTGAATCCACATAGTGTGAACTCATTGGCATTGTTTAATCCACATATGTAATCCACCAAGTATGAAAAGGCTTTGTT GTTGTTTATCTTCAGAGTGTTGTGTTGCCTGGGAACTCAGAATATCAGTTGCATATATACATTTGAATTTTATAGATAAAGTATGTTAGTTTAGAATCCC ATATTAGTGCTACCTAGTTGGGGATATGATGGAATGGGC
• Tissue: pods
• Gene name: LI_gene_184498;
• Additional information: details;

Expression of Ll_transcript_289169

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.2
• PS2: 0.3
• PS3: 0.1
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289169

• Blastp: WD repeat-containing protein 48 from Macaca with 37.7% of identity
• Blastx: WD repeat-containing protein 48 from Silurana with 36.4% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0000363)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440511.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;