| Id Trinity | TRINITY_DN51383_c1_g1_i29 |
|---|---|
| Name Transcript | Ll_transcript_289780 |
| Sequence | GTCATTCCTCTTGTATTATTTTGTTGAAAGTTGAAATCATGATTTTCTTAGGATATTCCAATTGATGGCTTCAGCAAATTTTCCATGTCAATGTTCATGG TCTATTGGATTTACAGTGATTGTCTTATGCAGGAACTCAATTCTGATTGGCAACAATCAGCAACACGTCTACTTGTTGCAATAGGCTCACATTTACCTGA TCTTATGATGGAAGAAATTTTTCTTCATTTATCTGGTACAAATGCAGCATTACCTGCTATGGTCCAAATACTTGCAGAATTTGCTTCTACTGATCCCTTG CAGTTCATTCCCCGTTGGAAAGGTGTACTTTCACGAATTTTGCCAATTCTTGGAAATGTACGAGACATGCACCGGCCAATTTTTGCAAATGCATTTAAGT GTTGGTGTCAAGCTGCTTGGCAATACAGTACAGATTTTCCTTCACATTTTCCCCTGGGTGGTGATGTCATTGCAGGTCATTTCTAAATTCTGCTTTTGAG CTTTTGTTGAGAGTTTGGGCAGCTTCACGGGACCTAAAGGTTCGGGTAGCATCTGTGGAAGCACTGGGACAGATGGTTGGTCTCATAACACGTACACAAT TAAAAGCAGCTTTACCAAGGCTTGTTCCTACAATATTGGACTTGTATAAAAAGGATCAAGATATTGCTTTTCTTGCAACATGTAGTCTCCACCATCTGTT AAATGCCTCGTTATTGTCAGAAAGTGGTCCTCCTATGATTGACTTCGAGGATTTGACTCTTATTCTGTCAACACTTCTACCCGTGGTTTCTTTCAATAGT GACAGCAATGATCAATCAGATTTCTCCGTGGGTCTGAAGATGTATAATGAGGTGCAGCATTGCTTTCTGACAGTTGGCTTGGTGTATCCAGAAGATCTGT TTTTGTTCCTTGTAAATAAATGCAGGCTGAGGGAAGAACCATTGACCTTTGGTGCACTGTGTGTTCTGAAGCATCTTTTACCAAGGTTATCTGAAGCTTG GCACAGTAAAATACCTGTACTAGTTGAAGCTGTGAAGTCTTTGCTAGAGGAGCTAAACTTAGGTGTCCAAAAAGCACTTTCTGAGTTAATTGTGGTTATG GCTTCGCACTGCTACTTGGTTGGTTCATCTGGTGAATTGTTCATTGAATATCTTGTCCGCCATTGCGCTCTAACAGATCAACATTGGAGTGATTTTGAGA GCATCCCATATAAGAAAACAGAGATGAAAATTGGAGCAGTTACTCCAGCAGAGTTAAGAGCAGTTTGCGAAAAAGGTCTCCTTCTGGTAACTATCACTAT TCCTGAAATGGAGCACATTCTTTGGCCATTTCTGTTGAGGATGATTGTTCCACGGTCCTACACTGGTGCTGTTGCCACGGTTTGCAGGTGCATCTCGGAA TTGTGGCGGCATAGATCTTATGGCAATGACATGTTGAGTGAGTGTAAAAACCGTCCTGATATGCCAATTGCTGAGGAACTTCTTGCCCGTTTAATCGTGC TTTTGCATAATCCTCTTGCAAGGGAGCAGTTGGCCACCCAGATTTTGACAGTTCTATGTCTTCTGGCACCTCTATTTCCAAATAATATCAATTTGTTTTG GCAAGATGAGATTCCAAAGATGAAGGCATATGTTAGTGATACAGAAGACTTGAAACAAGATCCACAATGTCAAGACATTTGGGATGACATGATAATTAAT TTTCTTGCAGAATCTTTGGATGTGATTCAAGATGCAGATTGGGTTATGTCTCTCGGAAATGTTTTTGCCAAACATTATGAACTTTATGCATCTGATGATG AACACGCCGCACTCCTTCACCGGTGCTTGGGGATTCTGCTTCAAAAGGTTAATGACAGAGCTTATGTCCATGATAAAATAGATTTGATGTATAGGCAGGC GAGCATTGCGATTCCAACAAATAGGCTTGGGTTGGCAAAAGGAATGGGATTGGTTGCGGCATCCCACTTGGATACGGTGTTGGAGAAGCTAAAGGATATT CTAGACAATGTTGGACAGACCATATTTCAGAGGATAATGTCATTATTCTCCCATAGTTTCAGAACAGAAGAGTCTGATGACATACATGCTGCTTTGGCAC TAATGTATGGATATGCTGCAAAATATGCCCCATCCTCAGTTATCGAAGCCAGAACAAATGCCCTTGTTGGGACCAATGTGCTTTCACGGCTTCTTCATGT GCGGCACCCCAGAGCAAAGCAAGCTGTCATCACAGCAATTGATTTACTAGGTCTGTGATTATCTTCTGGCGTTTCCTTATTATTGATTCTTGTTGTTATC CTTCTTTTTTGATGCAGCTGCTGTTAATTTTGTCATTAATGCTTCTTATTGATTACTTGTGGGGTTGTTTAGTGTATTTGACCGGAGCAGAATGCCCACA ATTATTTAAAAGGGTTTTGTTCTTTTACTGTTCTTGAGCCACTTTTTGCTTACAACAATTGTCACTTGCATTTCACTTCAAGATGTATCAGTGGTTAACT TGAGTTGTGGGTATATTCTTCTCTTACACAGTTTACAATAAAGGAAAAGCTCTTAGGCATTCACGAGATCAATTGTAGTATCTTAATGCTCTCTTCTTTT GTGTTATCAGCTCATTTTCAGCTCTCTTCATCTCCTGCTGAGACTTCTTCATAACTTAATCAATTTTGAGTTTAATAAATATGCATGACGGCTGATATTT CCCTGGTAACCTTATGAGTGTGACATGGTCCTAATAATACAGGTAATGCGGTCATTAATGCCGCTGAAAGTGGTGCACCATTTCCCTTGAAAAGAAGGGA CCAATTGCTTGATTATATTTTAACTTTAATGGGTCGAGATGACAGTGATGGCTTTGCAGATTACAATGAACATTTGCGTACACAGGCCCTTGCTATAAGT GCTTGCACCACTTTGGTCTCTGTGGAGCCAAAACTAACAGTTGAAACTAGAAACCATGTAATGAAGGCCACACTAGGGTTCTTTGCTATACCAAATGATC CAGTTCATGTTGTCAATCCTCTTATAGACAACCTAATCACTCTCTTGTGTGCAATTCTTCTCACTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_184522; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289780
| Blastp | Protein SHOOT GRAVITROPISM 6 from Arabidopsis with 73.47% of identity |
|---|---|
| Blastx | Protein SHOOT GRAVITROPISM 6 from Arabidopsis with 73.75% of identity |
| Eggnog | Heat repeat(ENOG410XQE8) |
| Kegg | Link to kegg annotations (AT2G36810) |
| CantataDB | Link to cantataDB annotations (CNT0002789) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425603.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |