Id Trinity | TRINITY_DN51390_c0_g1_i11 |
---|---|
Name Transcript | Ll_transcript_289698 |
Sequence | GAACTTTTACAACGTGAAAATGTTGATTGTTGAGTGAGCATAGCAAGAGCATGCAGCCGCTTTTTTTATTGATCGATTTTTATGTTACATACAAAATCGC TTTTCTCACTTTTCTTTATCTCTTTCAACAACTGAGAAGCTTTTTCACTCTCTCTCTAAAAACAAGGTCCTCGAATCTCTCTATTCCACACAGAGAGAGA TAGAGAGCGAGTGAGAACCAGCGTTCGGTTAACGGATTCGTTCCCTCTTCAACAATTCTAAGCATCTTTCTCGGTTCAAAATAATTTCGTGTTTTCGATT GTAATGTGGTGGAGTGAGTGATTCCTTGTTATTGCATTGTTATGGCTGCTGATTCGTCTTTTGAGGGTGTTGCACTTGATCCTTCTAAATGCAGTAAGTT GAGTATGGAGGAAAAAAGAGAACTTGTATATGAAATATCTAAGTCTCATGCTGCATCTGAGATGCTCCAGTCATGGAGTCGTCAAGAGATTTTACAAATC TTGTGTGCAGAGATGGGAAAAGAAAGGAAGTATACAGGGCTGACAAAGTTGAAAATTATAGAACACCTTCTAAAAATTGTTTCTGAAAAGAAATCAGAGG GCCATGAAACAGATTCTGAACTACGCTCTTCTGCAGCACATGGTCAGCAATCTGCAAAAAGGCAGAGAAAAATTGAGAATCCATCTCGATTACCTGTAAC TGCAAACAATGTTTCAGCCAATAATGATGGTGATATGGGTATTGCCACATATTGCAAAAACTCAGCTTGCAAAGCTACCTTAAATCAAGCAGATGTGTTT TGCAAAAGATGTTCATGCTGCATTTGCCATCAATATGATGACAACAAAGACCCAAGCCTGTGGTTAATATGTAGCTCCGAATCTCCATTTCCTGGTGTTT CTTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGATGGTTCTGGCATTGGCAAAAATGGTGAACGTCTCAAGCTCGACGGAGGCTTCTACTG TGTTTCTTGTGGGAAAGTAAATGATTTACTCGGATGCTGGAGAAAACAACTGATGGTAGCTAAAGATACCAGACGTGTGGACATACTCTGTTATCGTGTC TCCTTAAGCCAAAGACTTTTACAAGGGACTGAAATTTATCAAGAACTTAATGAAATTGTTGATGAAGCGGTGAAGAAACTTGAACCTGAAGTGGGTCCAC TGACTGGATCACCAGCGAAGTTTGGTAGGGGGATTGTGAACAGGCTTTCATCAGGACCAGAGGTTCAGAAACTTTGTGGTCTGGCTGTGGAATCACTTGA TTCACTGCTTTCTAAAAGGATCTTGCCTTCACCACCTACTCCAACAGTTCAAGGTGATGACTATTTGCCCCTCCAATTTGCCTTGTTGCTCTGTATCATT ATAATAAAGTGCATATTCACCTATTGATTAGGTGGTGGTCTGTGTGACAAGGATAGTACTTGTTCTGTGGGACTAAGTACTTTATTAATTTCACATTTAT TTTATCTTAATATATATATGCTTTTGTGGGCTATTGGTGTAAATTACTGGAGCATAGGAATTAATTTGGAAGAGTGCTTTTGGGGATATTCACCCAAAGT TAATTTCAGGTAATTGGTAGTAGTACCAAACTCACAATTTGCCAGGAACTTCAATAGTGCTAATTTACTTTTGGGGACCAAAAATCTGCCAACATTATTT TTTGTATCTATGCTTGCATTGGATTTTGTATCGAAGTATAGAACTACGATATTGTAATTAGGATTGTTATCAGCTGATTAATTATTTACCAATGGGCCTA AATTATCGTTTAAGGTAGTTATTGATCTTCTTGTTGTTACTTGACATTCTCAGGTGCTAATATGCTTGCTCCAAATATGTTGAGGTTTGAAGATGTCACT GCAACATCCCTCACTGTTATTTTGGGTTCTGAAGACCCTGCTAGAGAAAATATTGCAGGTTACACCTTGTGGCATCGTAAAGTTGATGATGTGGACTATC CAGTGGAGCCGACTTGCACTTTGCTTCTGCCAAATAGGAGGTTCAGTATCCGGAGTTTAACTCCAGCTAGAGAATATATTTTCAAAGTTGTTTCCAATGA TTTGAGAGAGTTGGGCATGTGCGAAGTTCATATCTCAACAGAGCATGGTGAGGACGAGGTCCCTAATTGCTCAGCAACAGAAAGAAGTCAGAGCCCAACA ACCAATTGTAGCAGCCTTTCCAATCCGTCATCAGTTGAAGATGAAACTAATAACAGTAATCCATATAGTGATCAGACTGGTAATCAAGCCGACCGCTATC ATACTTTTTACAAGGATTCTGACCAACTTGCTTCTGGAAATTTGTCTAATGATGCTATGAACTGTTCCAATATAGTAGGAGTGGGACCTCCCAAAAATGC AGATTCTTTATCAGACAAACAGCATGCCGCTGGAACAGCTGGATCCATTCCTGCCCCTGATGTACTAAAGCTTGAAAACAAGCATGCACAGGAGGAACAA GTTACTGAGGACATGAGCATTGACGATGGATTGAATTCCCCCGTTCAAACTGGGAGGGAATGTGTGCCATTAGTAGGTACCTCAGAAGGAGGCTTGCCTA ATACTCCTTGCAAGTTGGAAATACTCAAAGATGGGCCCGGAAGAAATGGTAGATCTAAATCCGGTGGCAAAGATCTAGAAAATGGATCTGGGAAAAGGGA GGGGCCCCAAGATGGAAGCACATCCAAGAAGGGGAGTGGGGAAAGACAAGATGAAGGGTGTACTGATCGTGATTTTGAGTATTATGTCAAGGTGATTAGA TATTTAGAATGTGAAGGACATATAGAAAAGAACTTCAGACAGAAGTTTCTTACTTGGTACAGCTTAAGAGCAACCTCTCAAGAAGTAAGGATTGTGAAAA TATACATTGATACATTTCTTGAAGATCCAGCGTCTCTTGCAGAGCAGCTTGTGGACACCTTTTCAGAATGCATATCAAGCAAGAGAACTTCAATGGTGCA GACGGGATTCTGCATGAAGCTTTGGCACTGATTGTAGTAGGTCCAGTGCTTAAACTCCATTCAGGGTTGCAACACTGTAATTTTTTAGATGTTTAATATT CTTCATTTAGACAGTTATTAAATATATTTATTACAACATTGTCGTTCATATGGCATGGTAATGTAAGTATTCCATATGCAACTTATTTTTATGGTGCACC ATTAAAAGACAAAGGATGGGTGTGATCATTTGTTTTGTTTTGACCCGGTTTGGGACATTGCAAGGTAGATGAATCATTTGTTTATTCTAGAGATGAAAAA CTTATCCACAATTCATCCATTAAATTTATCâBLAST |
Tissue | pods |
Gene name | LI_gene_184587; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_289698
Blastp | VIN3-like protein 2 from Arabidopsis with 40.8% of identity |
---|---|
Blastx | VIN3-like protein 2 from Arabidopsis with 58.43% of identity |
Eggnog | protein VERNALIZATION INSENSITIVE(ENOG410YG10) |
Kegg | Link to kegg annotations (AT4G30200) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442347.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |