Ll_transcript_289711

• Id Trinity: TRINITY_DN51390_c0_g1_i24
• Name Transcript: Ll_transcript_289711
• Sequence: GAACTTTTACAACGTGAAAATGTTGATTGTTGAGTGAGCATAGCAAGAGCATGCAGCCGCTTTTTTTATTGATCGATTTTTATGTTACATACAAAATCGC TTTTCTCACTTTTCTTTATCTCTTTCAACAACTGAGAAGCTTTTTCACTCTCTCTCTAAAAACAAGGTCCTCGAATCTCTCTATTCCACACAGAGAGAGA TAGAGAGCGAGTGAGAACCAGCGTTCGGTTAACGGATTCGTTCCCTCTTCAACAATTCTAAGCATCTTTCTCGGTTCAAAATAATTTCGTGTTTTCGATT GTAATGTGGTGGAGTGAGTGATTCCTTGTTATTGCATTGTTATGGCTGCTGATTCGTCTTTTGAGGGTGTTGCACTTGATCCTTCTAAATGCAGTAAGTT GAGTATGGAGGAAAAAAGAGAACTTGTATATGAAATATCTAAGTCTCATGCTGCATCTGAGATGCTCCAGTCATGGAGTCGTCAAGAGATTTTACAAATC TTGTGTGCAGAGATGGGAAAAGAAAGGAAGTATACAGGGCTGACAAAGTTGAAAATTATAGAACACCTTCTAAAAATTGTTTCTGAAAAGAAATCAGAGG GCCATGAAACAGATTCTGAACTACGCTCTTCTGCAGCACATGGTCAGCAATCTGCAAAAAGGCAGAGAAAAATTGAGAATCCATCTCGATTACCTGTAAC TGCAAACAATGTTTCAGCCAATAATGATGGTGATATGGGTATTGCCACATATTGCAAAAACTCAGCTTGCAAAGCTACCTTAAATCAAGCAGATGTGTTT TGCAAAAGATGTTCATGCTGCATTTGCCATCAATATGATGACAACAAAGACCCAAGCCTGTGGTTAATATGTAGCTCCGAATCTCCATTTCCTGGTGTTT CTTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGATGGTTCTGGCATTGGCAAAAATGGTGAACGTCTCAAGCTCGACGGAGGCTTCTACTG TGTTTCTTGTGGGAAAGTAAATGATTTACTCGGGTAATTACTGCTATATTTTTTAGTTACTTTTATGATATCTGACATCCATTTAAAATTTCTGCTTTTC TTTCTTTGTCTTCTACACCAGAAGCTTCCTGTTCATGCAAATTATTATGTATTAGGTAGATTTTATTTACTCATTTTTTGTTTTCAAGATACATCAAAAG ACTTCTGCCATATACAATAAGGAAAGAAATAAATAAACTGACGCTTCTTATAATCCTATAAAATATAATGCCAATGTCTTGTTAGAATTCTCTTCATGCT AGAGTCTTCTTAGAATTCTCGTGATCAATTGAATACCACGTAGCACAATTATTTGGTTTAAATGTATGACGTGAATCAATGATGTTAACGGAAATCTCTC TGTTTTTTTTCCTTTCCTCCCTTTTTTTGCAGAGTTCAAAAGTCATTTAGGTTGTTTTTAATAGCAAATAGAATCATGACACTTTAGTTCACAAGTTGCT GTAAACATGATAGGACTACCATTTCAAGATATATCTTAGGTATGATCTGCGTTTTGTGTGTGTGTGTGTCAGAGAGAGCTTTATAGAGTGCTAATGTTCT TCCGGATTTTTTTAGATATAGCGATTAGTGAACTCCACTCAACACTTCGGAGAAGATATTGTTATTGATAAATCAAAAGATGGTTAAGTTGTTCCTTTTA ATAGGTGGAGAATGTGCTATATTTCAGGATGAAATTTTGGTAAATGTGTAGGATAAGATCAATCTCATACAGGCTTGTTTCTTAAATTGTTTTAGATGCT GGAGAAAACAACTGATGGTAGCTAAAGATACCAGACGTGTGGACATACTCTGTTATCGTGTCTCCTTAAGCCAAAGACTTTTACAAGGGACTGAAATTTA TCAAGAACTTAATGAAATTGTTGATGAAGCGGTGAAGAAACTTGAACCTGAAGTGGGTCCACTGACTGGATCACCAGCGAAGTTTGGTAGGGGGATTGTG AACAGGCTTTCATCAGGACCAGAGGTTCAGAAACTTTGTGGTCTGGCTGTGGAATCACTTGATTCACTGCTTTCTAAAAGGATCTTGCCTTCACCACCTA CTCCAACAGTTCAAGGTGCTAATATGCTTGCTCCAAATATGTTGAGGTTTGAAGATGTCACTGCAACATCCCTCACTGTTATTTTGGGTTCTGAAGACCC TGCTAGAGAAAATATTGCAGGTTACACCTTGTGGCATCGTAAAGTTGATGATGTGGACTATCCAGTGGAGCCGACTTGCACTTTGCTTCTGCCAAATAGG AGGTTCAGTATCCGGAGTTTAACTCCAGCTAGAGAATATATTTTCAAAGTTGTTTCCAATGATTTGAGAGAGTTGGGCATGTGCGAAGTTCATATCTCAA CAGAGCATGGTGAGGACGAGGTCCCTAATTGCTCAGCAACAGAAAGAAGTCAGAGCCCAACAACCAATTGTAGCAGCCTTTCCAATCCGTCATCAGTTGA AGATGAAACTAATAACAGTAATCCATATAGTGATCAGACTGGTAATCAAGCCGACCGCTATCATACTTTTTACAAGGATTCTGACCAACTTGCTTCTGGA AATTTGTCTAATGATGCTATGAACTGTTCCAATATAGTAGGAGTGGGACCTCCCAAAAATGCAGATTCTTTATCAGACAAACAGCATGCCGCTGGAACAG CTGGATCCATTCCTGCCCCTGATGTACTAAAGCTTGAAAACAAGCATGCACAGGAGGAACAAGTTACTGAGGACATGAGCATTGACGATGGATTGAATTC CCCCGTTCAAACTGGGAGGGAATGTGTGCCATTAGTAGGTACCTCAGAAGGAGGCTTGCCTAATACTCCTTGCAAGTTGGAAATACTCAAAGATGGGCCC GGAAGAAATGGTAGATCTAAATCCGGTGGCAAAGATCTAGAAAATGGATCTGGGAAAAGGGAGGGGCCCCAAGATGGAAGCACATCCAAGAAGGGGAGTG GGGAAAGACAAGATGAAGGGTGTACTGATCGTGATTTTGAGTATTATGTCAAGGTGATTAGATATTTAGAATGTGAAGGACATATAGAAAAGAACTTCAG ACAGAAGTTTCTTACTTGGTACAGCTTAAGAGCAACCTCTCAAGAAGTAAGGATTGTGAAAATATACATTGATACATTTCTTGAAGATCCAGCGTCTCTT GCAGAGCAGCTTGTGGACACCTTTTCAGAATGCATATCAAGCAAGAGAACTTCAATGGTGCAGACGGGATTCTGCATGAAGCTTTGGCACTGATTGTAGT AGGTCCAGTGCTTAAACTCCATTCAGGGTTGCAACACTGTAATTTTTTAGATGTTTAATATTCTTCATTTAGACAGTTATTAAATATATTTATTACAACA TTGTCGTTCATATGGCATGGTAATGTAAGTATTCCATATGCAACTTATTTTTATGGTGCACCATTAAAAGACAAAGGATGGGTGTGATCATTTGTTTTGT TTTGACCCGGTTTGGGACATTGCAAGGTAGATGAATCATTTGTTTATTCTAGAGATGAAAAACTTATCCACAATTCATCCATTAAATTTATC
• Tissue: pods
• Gene name: LI_gene_184587;
• Additional information: details;

Expression of Ll_transcript_289711

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.5
• PS2: 0.7
• PS3: 1.4
• PW1: 0.2
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_289711

• Blastp: VIN3-like protein 2 from Arabidopsis with 41.98% of identity
• Blastx: VIN3-like protein 2 from Arabidopsis with 42.21% of identity
• Eggnog: protein VERNALIZATION INSENSITIVE(ENOG410YG10)
• Kegg: Link to kegg annotations (AT4G30200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442332.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;