Ll_transcript_288083

• Id Trinity: TRINITY_DN51391_c1_g1_i11
• Name Transcript: Ll_transcript_288083
• Sequence: GTACAATCATTCATTCTTCAAACCTCAATTTCCCCTCTTTTCTCTGCAAACCCTAGCTCCCTCATCTCATCCTCACCGCCATGGCCAAGAAGCGAAAGCT CCGATCCTCCGACCCCGAACCTGAACCTCAGGATATTCAGGACCCCCAAACCCTAGAAGAAGCCCAGCACCACGTGCCCGTGGAGGAGGAAAACCCAGAG GTGGAAGAAGAAGGAGATGATGAAGATGAAACGTTAGAAGAGAAGGAACAGGATGCTGAACCTTCAAACGATGCTGCTGTTGCATCTGAATCAAGTAAGG TTGAAGTGAACGGTGACAACAACAACGAAGAGGTGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGACCTTGA TTTGGAAGATGAACCTGTTGAGAAGCTTCTAGAACCTTTTACTAAGGAGCAATTACACGCGCTCGTGAAGCAAGCTGTTGAGAAGTACCCTGATTTCGTT GAGAACGTTCGCCAGCTGGCAGATGTGGACCCCGCACACCGCAAAATCTTCATCCACGGCTTAGGTTGGGACGCTACTGCTGAAACGCTAACATCTGTTT TCTCGAAATACGGCGAAATTGAAGACTGTAAAGCTGTCACTGATAAGCTTTCTGGGAAATCGAAAGGCTATGCTTTTATCCTGTTTAAGCATCGTAGTGG GGCCCGCAGAGCGCTGAAGCAGCCACAGAAGAAGATTGGTAACCGGACAACTTCGTGCCAATTGGCTTCTGCTGGACCAGTTCCGGCGCCGCCACCTGTG ACTCCGGCTGTTTCGGAGTATACACAAAGGAAGATTTTTGTGAGCAATGTGAGTGCTGATATTGATCCCCAGAAGCTGCTTGAGTTCTTCAGGCAGTTTG GGGAGGTTGAGGATGGTCCTCTTGGTCTTGATAAGCAGACTGGGAAGCCGAAAGGTTTTGCGCTTTTCGTGTATAAATCGGTTGATAGTGCGAAGAAGGC TCTTGAAGATCCCCACAAGCCGTATGAGGGGCATGTTTTGTATTGCCAAAAGGCTGTTGATGGACCTAAGGGGAAACATGGTTATCATCCGCAACCGCAT CACCAACACCATCAGCACCAGCATCATTCCCAACATCATCACCAGCCTCACTATCAAAGGAAGGAGAAGAACAGGTATTCTTCTGGTGGGCCACCACATG GTGGTGGCCATTTGATGGCACCATCAGGTCCTTCTGTAGGAGGTTACAATCCGGGAGTGCCTGCGGCTCAGGGGTTGAATCCTGTGCTTGGGCAGGCAAT ATCGGCTTTGCTCACAACCCAAGGAGCTGGGTTGGGATTTGGGAACCTGCTTGGAGGTTTTGCTGGTGCACCTGTGAATCAGTCTGTTCCGCAAGCTGGG TATGTTAATCAGCCTGCTATGAACTACGGGAACCAACCGGGAATGCAGCAGGGATACCAGAATCCTCAAATGGGGCAGAGCAGTGGTGTTAGACCTCACC CTGGTGCTGGTGCCCCTTACATGGGTCATTAGATTCCTTCATAGATGCATCAATCATTTAATTTTGGACTGCGCTGATTCTTCTGAAGTACCAGGCACTA TTCAAATGCATCTTTTTAAATTTGTAATGAATCTTCACAATTTATTTTCTAAAGAACCAGATTCTGAAACCTGTATTCTCTTTCTCAGCAAAATTTCCCC TTGACATGTTTTTAAAATCGTTTAGTAACTCCCATTCCTTTGCGGAATTTGAAGAATGGTTGAATTTTGGGACAGAGAAAACTTTGTTTCAATAACTTTT AATTATGTGATGAACCTTTTATTGAACTTCCAATTCTGTTCTATCATTGCTATTTTCCTATTTTATACTTGTAGTTTCTTGTTTTCTTGTCATCGATGAA GTTCTTTTTTGTATAGCTTTTTTAACTGAACTAGATATTACATGTCGCACCATATTTTATTTGCTTGAGCGGCTGACTTGTCAAAGTGGTAGTTTCTTGT CACAACAATTGCTATAATCTGTTCATGATGACAGTCATCTGTAATTCTGTATCTACTGATGAAGTATGGATTCTTCTATTTACTTCCGATGCAAAAAGCA GCTACATTTGGTGGGTGGGTTACTTTCAGTATATATAGGTTTGCCCAGATTACTTTGGGGTGAATGTCGAAGAGAATATCAGGTGGGTGCAGTGTTGTTA ACCATATTTGAAGTTCTCCATGGGTATGATTTTTTATTTAGCTATCTGTATGGTGAAGCTTTTAAGTTGGGATTAGTGCCTTCTTTTAACTGGTGAAAGC TTTTAATTGTTTTTTTAAGACATTTTTCACGTGCATAGTTGGGCTTCCAAATTGTGTAGTTTTTCGAAATTATTGTTTTTCAGTATACAATCCGCTTGCA AAACAGAAAAGCCCAATTTGGTAAAGCTACAAAAGGAATAAGTTTATTTCTTTCTAAACTTAATCCAAAATGTGTTGCTTTTGCCAAACAATCTTGTCGA AAACCATTACTTTTTCTTAGTGCTAAGTTGTGAAAGACATGAAACCAATACCGAGCTGAATGTATTCCAAGAATTCTTCATATTTTCTTCTAGTGTGTTA ACACCGAAATTGCATCATGCATAATTTTCTATGCACGGGGCAATTTTAGCAGGCTGCTTATCATTAGAATGTTATTGATGGTGAGCAAACCTTGAGATAG CGGTGACAACTTAAGAAGAGTCTCTCTGTGATGGATGGGGCAGACGGCATGCATGAACTGCACCTGTGTGGGCCTCTTGGGCATAAAGGTATCCTCGACT TGTCATGTGATATGTCTAAGACTGACATGGTAACATCGTAGATGATGTTTGAAAAGTTTAATTTGTCATGTTGTATCTTGGAGAGGTGTGTATACTTTGA ATTCTGAGATTTCAGGAAGAAAAGCTTGTCAACTGTGCTATGCAGCGTGAACTACAACTTGTATTTACCTTTAGATGAAAGAACTTAACCTTCTTTGATG AGTGGAGTTCATTGATTGCTTCTTGATTTGTCAAATAACTGTTAAGGATTCAAGTTAAATCATTAGTGGTTTTGATTGGTAGTCCTAACCTAAGAAGTTG ATCATTATTGACTGTGAAAATCTTACTTTTGTCGTGTTAAACCCGATTAAACTGAAATAAGTTGGGAAGTCATTGGGAGTGTGCTG
• Tissue: pods
• Gene name: LI_gene_184592;
• Additional information: details;

Expression of Ll_transcript_288083

FPKM

• PAB: 18.4
• PNAB: 11.4
• PS1: 11.3
• PS2: 9.5
• PS3: 10.7
• PW1: 12
• PW2: 11.2
• PW3: 12.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288083

• Blastp: UBP1-associated protein 2B from Arabidopsis with 48.1% of identity
• Blastx: UBP1-associated protein 2A from Arabidopsis with 52.16% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT2G41060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434416.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;