Ll_transcript_288084

• Id Trinity: TRINITY_DN51391_c1_g1_i12
• Name Transcript: Ll_transcript_288084
• Sequence: GAAATATCTTACTATTCAGCATCAACAGCATCAGCATCGAAGTTGGTACAATCACTTTTCTTCAAACCTCATTTTCCCCCCCTCTCTCTCTCTCCAAACC CTAGCTTCCTGATCTCTTCTCATCGCCATGGCCAAGAAGCGAAAGCTCCGATCTTCCGACCCCGAACCCACCAAGCAACCCGAATCCGAGGCTATACAAG AACAACAACAAACCCTAGAAGGAGCCCAGGACCACATGCCAATCGATCAACAACAACAATCCATTGAAGAGTACCATCAAATCGAAGAAGAACAACAACT AGAGGAAGATGTCGAAGAAGGAAATGATGATGATGATGCACCAGAAAACGAAACCCTAGAAGACCAGAATCAGGAGCAGGATGTTGAACCTTCTTCCAAC GATAACGCAGTTACAGCATCTGAATCGGTTAAAGTCGAATTGAACGGTGAAGGAAACAACGAAGAGGAGGAGGATCTAGAATTGGAAGATGAGCCTGTGG AGAAGCTTCTAGAACCTTTCACCAAGGAGCAGCTACACGCTCTCGTCAAACAAGCCGTTGAGAAGTTCCCTGATTTCGCCGAGAACGTTCGACAGCTGGC AGACGTAGACCCCGCTCATCGGAAAATCTTCATCCACGGCCTAGGTTGGGATGCCACAGCTGAAAGCCTCACCTCACTTTTCTCCAAGTATGGCGAAATC GAAGACTGCAAGGCTGTCACTGATAAACTCTCCGGGAAATCGAAAGGTTATGCATTTATCCTCTTCAAACAACGCAGTGGAGCACGCAGGGCGCTGAAGC AGCCGCAGAAGAAGATAGGTAATAGAATCACTTCATGTCAATTGGCCTCTGCTGGACCAGTTCCTGCGCCGCCTCCGGTTGCTCCTGCGATTTCAGAGTA TACACAAAGGAAGATTTTTGTGAGCAATGTGAGTGCTGACATTGATCCTCAGAAGCTGCTTGAGTTTTTCAGGCAGTTTGGGGAGGTGGAAGATGGTCCT CTTGGTCTTGATAAGCAGACTGGGAAGCCGAGAGGGTTTGCGCTTTTCGTGTATAAATCAGTGGACAGTGCGAAGAAGGCTCTGGAAGATCCCCATAAGC AGTTTGAGGGGCATGTTTTGTATTGCCAGAAAGCTGTTGATGGCCCTAAGGGGAAACAAGGATATCATCAGCAACCACATCACCAACATCATCAGCACCA GCACCATTCCCACCATCATCACCAGCCTCACTTTCAACGGAAGGATAGGAACAAATATTCTTCTAGTGGTGGGCCTGCACATGGTGGCGGGCACTTGATG GCACCATCAGGTCCGTCTGTGGGAGGTTACAATCCTGGAGTGCCTGCAGCTCAGGGATTGAATCCAGTGCTTGGTCAGGCAATATCAGCTTTGCTTACAA CCCAAGGAGCAGGGTTGGGACTTGGGAACTTGCTTGGAGGTCTTGGCGGTGCACATGTGAATCACTCTGTTCCACCTGGTGGGTATGGTAATCAGCCTAC TATGAACTATGGGAACCAGCCAGGGATGCTGCAGGGATACCAGAATCCTCAAATGGGGCAGAGCAGTGGTGTTAGGCCTCATCCGGGTGCTGGTGCTCCT TACATGGGTCATTAGGTGAGTCACTCATATCATGCTCTCTTTTTTATCAATCAATATGCTGCTGAATGACTGAATCTTATCATAATTCATGTGATCATGC TGATTTTAAAGGTAATCTGATCTGTTGAGAAGAGTTGGGGTGGTTTAAAATGAGGATGTTGAAGGTGTAATGTTGGAAATTAAGGAAATACATAACATGG GGTTAGTAATATATACTGGATGAGTATTAAAAATGATAAACATAATGTCTTACAGTCTATGCTAAACTGACTATATCCACATGTGTTTGCTTGCACTAAA CTTGGTGAAAAATTATGGTTTCTGCATGTTAGTTGTGTCACTATGCTCTTAGTACCCCAGTCCTTACTCAGCTTTTGTTCATCAGTTGTCAAGTGAGTAA GTCTGGGCAGACATACTTATTAGTAGTACCCTCCATCTTGATAATTTTTTCCTAGTTTTGTTTTGCTTTTCTTGTTTGATTAGGTTTGTGTTGATGTAAT ATGCTCCACCTTATCTGCTTCTTTATATCAGGCTTGCATACTCAAACATGACTTAATGGTAAATTGTGAGAAAAATAAAAATCATTTGAAAATGAATAAT CACTTAGATATTGGGATTAAATAAGAAAGTTTAAGTTCATAATTATTATGAATGTTGCGTTTAATAACTCCTTTACCATCTCTTGCCCGTATCTTCTTTT TTTTTATTCTATTCCCCTGTTTTTAGTTAGTATACAATTACTATATTTGAATATGTAGTTTAAAACAATTATAAATTTAAAACTCTTGAAAATCTATTTT GCAGTACCAGAGGTATGTCTTTTAAGATTTCATATTTCTCTGTGGTTCTTCCGGAGATAATTGTTTTTCTTAAATTAGTCTTTTATGGTGTATGTATTCA TTGTGCAGATATCTTCATAGATGCATCAATCATTTAGTTTTGGACTGAGCTGATTCTTCTGAAGTACCAGACACTATTCAATTGCATCTTTTAAATTTGT AATCAATCTTTGCTATTTATTTATTGAAGAACCAGATTCTGAAACCTGTATTTTCTTTATATCTTAGTAAACTTTCCCCTTAATATGTTTTTAAA
• Tissue: pods
• Gene name: LI_gene_184592;
• Additional information: details;

Expression of Ll_transcript_288084

FPKM

• PAB: 1
• PNAB: 1.2
• PS1: 1.8
• PS2: 1.4
• PS3: 1.8
• PW1: 0.7
• PW2: 0.8
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288084

• Blastp: UBP1-associated protein 2B from Arabidopsis with 48.05% of identity
• Blastx: UBP1-associated protein 2A from Arabidopsis with 53.06% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT2G41060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455896.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;