Ll_transcript_288075

• Id Trinity: TRINITY_DN51391_c1_g1_i5
• Name Transcript: Ll_transcript_288075
• Sequence: TTTGAATTGGTTAAGGTCGAAGTGAACGGTGACGAAAACAACAACGAAGAGGAAGAAGAAGACCTTGAATTGGAAGATGAACCTGTGGACAAGCTTCTAG AACCTTTTACCAAGGAGCAGCTTCACTCTCTTGTCAAGCAAGCACTTGAGAAGTTCCCTGATTTCGTCGAAAACGTTCGCCACCTGGCTGATGTGGACCC CACTCACCGCAAAATCTTCATCCACGGCCTTGGCTGGGACACAACCGCTGAAACCCTAACATCTGTCTTCTCGAAGTACGGCGAGATCGAAGACTGTAAG GCTGTTACTGATAAGCTCTCTGGGAAGTCGAAGGGATATGCGTTTATCCTTTTCAAGCATCGTAGTGGGGCCCGCAAGGCGTTGAAGCAGCCACAGAAGA CGATTGGTAACCGAACCACGTCGTGCCAATTGGCCTCTGCTGGACCTGTTCCGGCACCACCTCCTGTGGCGCCTGCGGTTTCTGAGTATACTCAGAGGAA GATTTTTGTGAGCAATGTGAGTGCTGACATTGATCCCCAGAAGCTGCTTGAGTTCTTCAGGCAGTTTGGGGAGGTTGAGGATGGTCCTCTTGGGCTTGAT AAGCAGACGGGGAAGCCTAAAGGGTTTGCACTTTTCGTGTATAAATCGGTGGATAGTGCAAAGAAGGCTCTGGAAGATCCCCAAAAGCAGTTCGAGGGAC ATGTTTTGTATTGCCAGAAAGCTGTTGATGGCCCTAAGGGGAAACAAGGGTATCATCAGCAACCACATCACCAGCACAATCAGCAACAGCATCATTCCCA CCATCATCACCAGCCCCACCACTATCAAAGGAAGGAAAGGAACAAGTATACTTCTGGTGGGCCTGCTCATGGTGGCGGGCACTTGATGGCACCATCAGGT CCTCCTGTTGGATACAATCCCGGAGTGCAAGGGGCTCAAGGGTTGAATCCTGTGCTTGGTCAGGCGATATCGGCTTTGCTTACAACCCAAGGAGCCGGGT TGGGACTTGGTAACTTTCTTGGAGGTCTTGGTGGTGCACCTTTGAATCAGTCTGTTCCACCTGCTGGATATGGTAATCAGCCTGCTATGAACTATGGGAA CCAGCAGGGGATGCAGCAGGGATACCAGAATCCTCAAATGGGGCAGAGCAGTGGTGTTAGACCTCACCCTGGTGCTGGTGCCCCTTACATGGGTCATTAG ATTCCTTCATAGATGCATCAATCATTTAATTTTGGACTGCGCTGATTCTTCTGAAGTACCAGGCACTATTCAAATGCATCTTTTTAAATTTGTAATGAAT CTTCACAATTTATTTTCTAAAGAACCAGATTCTGAAACCTGTATTCTCTTTCTCAGCAAAATTTCCCCTTGACATGTTTTTAAAATCGTTTAGTAACTCC CATTCCTTTGCGGAATTTGAAGAATGGTTGAATTTTGGGACAGAGAAAACTTTGTTTCAATAACTTTTAATTATGTGATGAACCTTTTATTGAACTTCCA ATTCTGTTCTATCATTGCTATTTTCCTATTTTATACTTGTAGTTTCTTGTTTTCTTGTCATCGATGAAGTTCTTTTTTGTATAGCTTTTTTAACTGAACT AGATATTACATGTCGCACCATATTTTATTTGCTTGAGCGGCTGACTTGTCAAAGTGGTAGTTTCTTGTCACAACAATTGCTATAATCTGTTCATGATGAC AGTCATCTGTAATTCTGTATCTACTGATGAAGTATGGATTCTTCTATTTACTTCCGATGCAAAAAGCAGCTACATTTGGTGGGTGGGTTACTTTCAGTAT ATATAGGTTTGCCCAGATTACTTTGGGGTGAATGTCGAAGAGAATATCAGGTGGGTGCAGTGTTGTTAACCATATTTGAAGTTCTCCATGGGTATGATTT TTTATTTAGCTATCTGTATGGTGAAGCTTTTAAGTTGGGATTAGTGCCTTCTTTTAACTGGTGAAAGCTTTTAATTGTTTTTTTAAGACATTTTTCACGT GCATAGTTGGGCTTCCAAATTGTGTAGTTTTTCGAAATTATTGTTTTTCAGTATACAATCCGCTTGCAAAACAGAAAAGCCCAATTTGGTAAAGCTACAA AAGGAATAAGTTTATTTCTTTCTAAACTTAATCCAAAATGTGTTGCTTTTGCCAAACAATCTTGTCGAAAACCATTACTTTTTCTTAGTGCTAAGTTGTG AAAGACATGAAACCAATACCGAGCTGAATGTATTCCAAGAATTCTTCATATTTTCTTCTAGTGTGTTAACACCGAAATTGCATCATGCATAATTTTCTAT GCACGGGGCAATTTTAGCAGGCTGCTTATCATTAGAATGTTATTGATGGTGAGCAAACCTTGAGATAGCGGTGACAACTTAAGAAGAGTCTCTCTGTGAT GGATGGGGCAGACGGCATGCATGAACTGCACCTGTGTGGGCCTCTTGGGCATAAAGGTATCCTCGACTTGTCATGTGATATGTCTAAGACTGACATGGTA ACATCGTAGATGATGTTTGAAAAGTTTAATTTGTCATGTTGTATCTTGGAGAGGTGTGTATACTTTGAATTCTGAGATTTCAGGAAGAAAAGCTTGTCAA CTGTGCTATGCAGCGTGAACTACAACTTGTATTTACCTTTAGATGAAAGAACTTAACCTTCTTTGATGAGTGGAGTTCATTGATTGCTTCTTGATTTGTC AAATAACTGTTAAGGATTCAAGTTAAATCATTAGTGGTTTTGATTGGTAGTCCTAACCTAAGAAGTTGATCATTATTGACTGTGAAAATCTTACTTTTGT CGTGTTAAACCCGATTAAACTGAAATAAGTTGGGAAGTCATTGGGAGTGTGCTG
• Tissue: pods
• Gene name: LI_gene_184592;
• Additional information: details;

Expression of Ll_transcript_288075

FPKM

• PAB: 1.9
• PNAB: 1.4
• PS1: 0.8
• PS2: 0.8
• PS3: 1.7
• PW1: 1.2
• PW2: 1.4
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288075

• Blastp: UBP1-associated protein 2B from Arabidopsis with 56.77% of identity
• Blastx: UBP1-associated protein 2B from Arabidopsis with 57.19% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT2G41060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461443.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;