Ll_transcript_288454

• Id Trinity: TRINITY_DN51394_c0_g1_i10
• Name Transcript: Ll_transcript_288454
• Sequence: ATTTTTTATTTCTCTCTCGCCTTTTCCTATACTATGCACCTATGAAAAGAATAATACTATATGCTGAAAGTTACCTTTTTGCTTAGTTCAAAAAAAGGTG GTAGCTTTATATTCACCACTTTACCAATTTATATTGTGATGGACAATTCAGTTATTCTGTATGAGATGGATAATAGATTAATAGAGATAGAAAGCAAGTT GAAGTGGAGAAGGGAGAGATAGAGAGAAGAAAAGAAGCAATGGGGTTGTTGTTTTGAGTGAGGAAGGGATCTGATATTTCATATTCATTTCATTTTCATT GAATTCTCAACTCTCAAAATAGCTTTTTGGGTAACACTCAAGGGAGGTTGAAGATAAAAAGAAGGACCCCATTGGAAACTACTTAAAACTTAAAAGCAAG GGAGAAAGTTAAGGTATTGATTTTTGTTCGTGTTTGTAAAAAGCTTGTTTTAATTGTTGTGCCAACCTTTCCCATTCCAACCATTGAAAAATTGATTTTG TCTGTACTGAGCTATTATCTTTTTATTTTCCACACCACACACAAATTTCGTTTTCTGCTTGGTGGGGGCTCATAGGTTATGAAACAACATAAGTGTAAGT TTCATACACATAAAGTCAAGTAACCAGAAAAGGCTATCTCAGATCAGATTCACATCAAAATTTCCTTCTTATTTTCTCCTCTCATTTAATTCATTCAAAC CCACAAACCAAAATTCCAACTTTAAACTTGAAACTGTGACCCTTTGAAGCAAAGTAAAGAAAAACTCCTTTTTTTATAACTGGATTATTATATTGAGCTG GAGCCACTTCCAATTATATCACTCCGGAAATGAGAGCTGGACTAAGCACAATCCAACAAACGCTAACGCCGGAAGCAGCAAATGTTCTCAACCAGTCAAT CACGGAGGCTGGTCGCCGGAACCATAGTCAAACGACGCCGCTTCACGTGGCGGCGACACTTCTGTCATCCCCACCAGGTTACCTCCGTCAAGCGTGCATA AAATCTCACCCCAATTCCTCTCACCCTCTTCAGTGCAGAGCGTTGGAGCTCTGTTTCAGTGTTGCGCTTGAACGGTTACCAACTTCACAGAACACAAGCA CTTCATCGGAGCCACCGATTTCAAATGCTCTTATGGCTGCTCTGAAGCGCGCTCAGGCTCACCAGCGCCGCGGTTACCCGGATCTGCAGCAACAGCCTCT CCTCGCCGTGAAAGTCGAGCTGGAACAGTTAATTATATCAATTCTTGATGATCCAAGTGTTAGCAGGGTCATGAGGGAAGCTAGTTTTTCTAGTCCTTCT GTGAAAGCCACCATCGAACAGTCCTTGAATTCGGCGCCGTCTAATTCGAGTTCTATTGGGTTGGGGTTTCGGCCGGCTGCGTTGGCCATGCCAGCGGCGC AGCCAATGACTCAGAGCTTGTATTTGAATCCGAGGTTGCAACAGGGGAGTGGTGGTGCAGGACAATTGGGACAGGTGCAGAGAGGTGATGAAGTGAAAAC TGTTGTTGACATATTGATGAGGAGGAAGAAGAGGAACCCGATCTTGGTGGGTGAATCAGAGCCAGAGGCTGCGATCGAAAAGGTGTTGAAAAAAATTGAG AATAAGGAGTTGGGAGAAGCGAGTTTCGGTTTTAGTAATGTTCATGTGATTCATTTGGAGAAGGAGATTCCTTCTGATAGAGCGCAGGTACCAGCGAGGC TCAAGGAATTGGGTGATTTGATTGAAGCACGGGTGGGTAATTCAGGTGTTTTTGTGAATTTGGGTGACTTGAAATGGCTGGTAGAGCAGCCTGTTGGTTT TGGAGTTGGTGGTTTGGATAATAAACAGCAAATGTCGGCGGTGGAGGCCGGTCGCGCGGCAGTTGCAGAGATGGCAAGATTGGTTGCCAAGTTTGGCGAG GGTGGTGCTGGAAGGCTTTGGCTTTTAGGTACTGCTACTTGTGAGACTTACTTGAGGTGTCAGGTCTATCATCCTTCCATGGAAAATGATTGGGATCTTC AGGCTGTGCCAATTACCACCAGAGCACCTCTGCCTGGAACGTTTCCAAGACTTGGGACCAACAGCATTCTCGGCACCTCATTTGAGTCTCTGTCCCCATT AAAGGCTTTCCCAACTACAACAATCACTCCATCTAGGTGTGCCTCAGAGAATATAGCTCCTACTCCTGCTGGAGTATCAACTTGTTGCCCACAATGTATG AGGAACTGTGAACAAGAAATAACCGAAATGTTGAAAGAAAATGAGAAATCTGATTCCGAATCCCAATCAGATGCAGCCTGTCCACCTCTTCCACGGTGGT TGCAGGTTGCTAAAGTCAAATATCAGTCTCAGAGTAAAAGCCAAGAAGATGTGAAGCAGAGGACTCATGAATTGCAGAAGAAATGGCATGATACCTGCAT GAATTTACATCCTAAATTTCATGAGCGAAATGTGAGCACAGAGAGGATTACTCCAACTTCTTTTAACATCACAGGCCTGTACGGGCGACCTTTCCAACCA AAAATACCTCTGAACAAAAATCTTGAAACCTCTCTGCAATTGAGCTCAAATTCAATGCCTATCTTGTCACCACTGGAACCAGTGGCCAACTTACCACCAA GTCCAGTAACAACAGAGCTGGTACTTGGGCAAAAAAAGCCAGTAGATACCATTCCAGAAGAAACACAAGAACAGCCCATCAATGACTTGTTGGGCTGCTT GTCACAAAAGCAAGACAGCTTTGGTGAATTACAGAACGAAAAGATACTTGATGCCGATTCTTTCAAGAAGCTACTCAAAGGTCTGACTAAAAAGGTGTGG TGGCAGCACGATGCAGCATCTGCAGTGGCTACCACTGTGACCCAATGTAAAGTGGGGAATGGAAAAAGACACCAACTTGGAACAAAGGGTGACATGTGGT TACTGTTCTTGGGTCCTGACAGAGTTGGCAAGAAGAAGATGGCAGCAGCTGTTGCTGAGCTGGTAAATGGGTCCAATCCAATAATAATATCTCTTGCACA ATCGCGTGGTGGTGGAGACTCTGATGTTCCTCATATCCGTGGGAAAACAGTTCTCGATCGAATTGCAGAGGCTATAAGAAAGAACCCGCATTCTATCATC ATGCTTGAGGACATTGATGAAGCCAATATACTTATTCGCGGAAGCATAAAAAGAGCCATGGAACAAGGCCGGTTCCCTGACTCTCATGGCCGTGAAATCA GTCTTGGTAATGTCATGTTCATCCTCACTGCTAAATGGTTGCCAGAGGATTCCAGCTATTTGTCAAATGGGAATTCACTTGATGAAGAAAAGCTTGCAAA TTTAGCAAAAGGTGGTTGGCAACTTCGGCTATCAGTGTCTAAGAAGTCGTTGAAACGAAGACCAAATTGGTTATCCAGTGAAGGCAGATCATTGAAACCA AGAAAAGAGATGAATTCAGGTTTATCATTTGATCTCAATGAAGCTGCTGATGCAGATGAAGAGGAGGACAAAACAGATGAGTCACTCAATTCAAGTGACC TCACAGTGTACCATGAAGACAATCATGTAATTCATAATAAAAGATCACCCTCAACAATTCCCCGCGACCTTCTAGAATCAGTAGATGATGCCATTGTCTT CAAGCCTTTGAATTTCAACCTCATTCGTCGCGCTTTCACCACGTCCATCACGAAGAGATTTTCTACTATCGTTGGGAATGGGATATTTATTGAAGTGAAA GAGGAGGCTCTTGAGAAGATTGCTAGTGGAGTGTGGTTAGGCCAAACTAGCATAGAAGAATGGATGGAGAAAGTGCTGGTTCCCAGCTTCCAGCAGCTGA AGAAGAACTTCAATTCAAGCATCTATGACAACGAGTCTTCAATGGTGGTTAAGCTTGAAGATGACGGCTACTCCGAGCGCCGGAACTCGGAAGAGTGGCT ACCTGCGGCGGTGAGAGTGGTGGTAGAAGAGCATTGAGCATTTGAGTGAAAATATTCGTTTTTGAAGGTTTCAGAAATGTAAATAGACCACTTTGGCAGG GAAAAGTCAAATATAGTTGGTAGAAATAGAAAACCTGTTGGAAATGGAAGGATTATATTTTACATCTTTTTACTTATACAAAGATTAATTAATTTTTTTT TGTAAGCATAGGTATGTTAGTTACTTATATGTATAAAAAAGGGGGCATTATTTACTTTCCCCTTGTTTTAATTTTATAGTCTACCTTTACCCAGTATTGA TTAAATTATTTTTTTACTTCTAACTATTTGAGGTAATCTTACTTGAGTTGGTAACATCAAAACCTTTACATGGAAACATGAACCAACCATCAAATTTATA ATTAAT
• Tissue: pods
• Gene name: LI_gene_184612;
• Additional information: details;

Expression of Ll_transcript_288454

FPKM

• PAB: 23
• PNAB: 7.1
• PS1: 21.4
• PS2: 8.2
• PS3: 12.7
• PW1: 23.4
• PW2: 14.4
• PW3: 9.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_288454

• Blastp: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 51.73% of identity
• Blastx: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 51.41% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G57710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442195.1)
• Pfam: Clp amino terminal domain, pathogenicity island component (PF02861.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;